Natrinema versiforme: FEJ81_19070
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Entry
FEJ81_19070 CDS
T05974
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
nvr
Natrinema versiforme
Pathway
nvr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nvr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FEJ81_19070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nvr03021
]
FEJ81_19070
Transcription machinery [BR:
nvr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
FEJ81_19070
Prokaryotic type
Archaeal type
TFB
FEJ81_19070
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
RB_B
DZR_2
DUF1670
PHF5
DUF7129
Motif
Other DBs
NCBI-ProteinID:
QCS44449
UniProt:
A0A4P8WLL0
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All DBs
Position
pNVE500:complement(95774..96718)
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AA seq
314 aa
AA seq
DB search
MATRDIYETGFDEDVRTESSTNQCPECDGRVTTNAVETICEDCGLVIDEQRIDHGPEWRA
YDDEERERTGAPLTAARHDRGLSTEIGRGTDAKGNELSGKKRRRLARMRREQTRGRWRSK
AERNLAHGLGEVRRLASALELSDSVRDQACQLFRSAQNEDLLRGRSIEAIAAASVYGACR
CNGQAVILDEVADSARVELSRVRNAYKTLNTELGLPTPPRRPQSFIPRFASELDVADTVR
QRAFELAKSAEETIISNGCQPTGVAAACLYKAAREQGQFLTQTDLAEVAETTPVTIRTRW
NELEEVDDSTSAPA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccagagacatctacgaaactggcttcgacgaagacgtccgaacagaatcgagc
acgaaccaatgccccgaatgtgacggccgagtcaccacgaacgcggtcgaaacaatctgc
gaagactgtgggctggtcatcgacgaacagcgcatcgatcacgggccggagtggcgggcg
tacgacgacgaggagcgcgagcggacaggcgccccacttactgcggctcgccacgatcgc
ggcctgtcgacggaaatcggtcgcggcaccgacgcgaagggaaacgaactctccgggaag
aagcgacggcgactcgcgcggatgcgccgtgagcagacccgtgggcgctggcggtcgaaa
gcggaacggaatctcgcacacgggctgggcgaagtccgccggctggcgagtgcgctcgaa
ctctcagattcggtccgtgaccaggcgtgtcagctcttccggagcgcccagaacgaggat
ctgcttcgtggcagatccatcgaggccatcgccgcggccagcgtctacggggcctgccgg
tgtaacggtcaagcagtgatactcgatgaggtcgctgattcagcacgcgtcgaactgtct
cgagtgagaaacgcgtacaaaacgctgaatacagaattagggcttcccaccccaccgagg
aggccgcagtcgttcattccgcgctttgcgtcagaattggacgtcgctgacacggtccga
cagcgggcgtttgaactcgcaaagagcgctgaagagacaattatctcgaatggatgccaa
ccgacaggtgtcgcagcggcctgcctctataaggctgctcgagagcagggacaatttctc
acgcaaacagatctcgcagaggtggcggagacaacgccagtaacgatacgcacacgatgg
aacgaactagaggaggtcgacgattcgacgtcagcccccgcgtag
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