Natrinema versiforme: FEJ81_19165
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Entry
FEJ81_19165 CDS
T05974
Name
(GenBank) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
nvr
Natrinema versiforme
Pathway
nvr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nvr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FEJ81_19165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nvr03000
]
FEJ81_19165
03021 Transcription machinery [BR:
nvr03021
]
FEJ81_19165
Transcription factors [BR:
nvr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
FEJ81_19165
Transcription machinery [BR:
nvr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
FEJ81_19165
RNA polymerase III system
TFIIIB
FEJ81_19165
RNA polymerase I system
SL1/TIF-1B
FEJ81_19165
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
Motif
Other DBs
NCBI-ProteinID:
QCS44462
LinkDB
All DBs
Position
pNVE500:109622..110182
Genome browser
AA seq
186 aa
AA seq
DB search
MITSEHSPTIENVVASTGVDRELNLDAVAEDLDGTDYDQEKFPGAVYRTQNPKSAALIFR
SGKIVCTGAKSTDDVYKSLDIVFDELRDLGIDVPSNPEITIQNIVSSGDLGSTVNLNAIA
IGFGLENIEYEPEQFPGLVYRMDDPSVVTLIFASGKVVVTGAKEPADAGRALDVISSRLD
ELGLLD
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgattacttcagaacactctccaacgatagagaacgtcgtcgcttcaactggggtggat
cgagaactcaacctcgatgcggtcgctgaagacctcgacggaacggactatgaccaagag
aagttccccggggcagtttaccggacccaaaacccgaaatccgccgcattgatcttccgg
tcgggcaaaatcgtctgcacaggtgcgaaaagcaccgacgacgtctacaaaagtctcgac
attgtattcgatgaactccgtgacctaggtatcgacgttccgtctaatccagagatcacc
atccaaaatatcgtttcgagtggcgacctcggatctacagtcaatctaaacgctatcgcc
atcggcttcggtctcgaaaacatcgaatacgaacccgagcaattcccgggcttggtctat
cgcatggacgaccccagcgtggtcacccttatcttcgctagcggcaaagtcgtcgtcaca
ggagcaaaagaaccggcggacgctggccgcgcactcgacgttatctcgtcacgtctcgat
gaactcggcctgttagactga
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integrated database retrieval system
