Natrinema versiforme: FEJ81_19280
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Entry
FEJ81_19280 CDS
T05974
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
nvr
Natrinema versiforme
Pathway
nvr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nvr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FEJ81_19280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nvr03021
]
FEJ81_19280
Transcription machinery [BR:
nvr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
FEJ81_19280
Prokaryotic type
Archaeal type
TFB
FEJ81_19280
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
A2L_zn_ribbon
DUF7573
GATA
Cas12f1-like_TNB
Sigma70_r4
HTH_Tnp_ISL3
Zn_Tnp_IS91
Zn_ribbon_8
Zn_ribbon_IS1595
GHMP_kinases_N
Motif
Other DBs
NCBI-ProteinID:
QCS44476
UniProt:
A0A4V1G086
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All DBs
Position
pNVE500:134397..135353
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AA seq
318 aa
AA seq
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MVWSVRLRDDEHETRQTESDATISTCSECGSSSVVRHSDQGERVCEECGLVIEEAMVDSG
PEWRAFNHKERQEKSRVGAPTTQTMHDKGLTTKIDWKDKDAYGRSISSKKRSQMNRLRKW
QSRIRTKDAGERNLQFALSEIDRMASALGVPRSVREVTSMIYRRALQEDLIRGRSIEGVA
TAALYAGCRQEGIPRSLEEITEVSRIERIEVSRTYRYISNELGLELLPIDPKQYVPRFSS
KLDLPQEVEAKANEIIEETADPLLSGRGPSGFAAAAIYAAALLCNEKRTQKEVADVAQVT
EVTIRNRYQEQIEMLGIH
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggtctggtctgttcggctcagggacgacgagcatgaaacgaggcaaaccgaatccgat
gcaactatctctacatgttcagagtgtgggtcgagtagcgtagtccgacattctgatcaa
ggtgagcgagtttgtgaggagtgcggtctagtgattgaggaagcaatggttgattcgggg
ccagaatggcgagcatttaatcacaaagagcgacaggagaagtcgcgtgtcggtgcccca
actactcagacaatgcacgacaaggggctcaccaccaaaatcgactggaaagataaggat
gcatacggccgctcgatttcctcgaagaagcgttcgcagatgaaccggctacggaaatgg
cagagccgtatccggacgaaagacgccggtgagcggaatctccagttcgcgctcagcgag
atcgaccggatggcctcggcactgggtgtcccacgatcggttcgtgaggtaacaagtatg
atttaccggcgagcgcttcaggaagatctcattcgcggacgatcaattgagggcgttgcc
acagctgcactgtatgctggctgtcggcaagaaggtattccgcgctcattagaagagatc
acagaggtttcgcgtatcgaacgaatagaggtaagccgtacctaccgatacatctcgaac
gagctcggtcttgaactgcttcctatcgatccgaagcaatacgtacctcgctttagctca
aaactggacctcccacaggaagtcgaagctaaggccaatgaaatcatcgaagagaccgct
gatccattactctctgggagaggtccatcgggattcgctgctgccgctatttacgctgcc
gccttgctttgcaacgaaaaacggactcagaaagaagtagcagatgtcgcccaagtcacc
gaagtgacaattcgtaaccggtatcaggagcaaatcgagatgcttggcatacattaa
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