Natrinema versiforme: FEJ81_19295
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Entry
FEJ81_19295 CDS
T05974
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
nvr
Natrinema versiforme
Pathway
nvr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nvr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FEJ81_19295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nvr03021
]
FEJ81_19295
Transcription machinery [BR:
nvr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
FEJ81_19295
Prokaryotic type
Archaeal type
TFB
FEJ81_19295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
HTH_AsnC-type
Xre-like-HTH
HTH_24
HTH_11
HTH_Tnp_ISL3
HTH_23
MerR
DUF6398
HTH_DeoR
Cyclin_N
HTH_28
HTH_5
ORC6_2nd
HTH_6
HHH
Motif
Other DBs
NCBI-ProteinID:
QCS44478
UniProt:
A0A4P8WLM5
LinkDB
All DBs
Position
pNVE500:137182..138000
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AA seq
272 aa
AA seq
DB search
MPTEPQNAVLEHLTSIQQSFTLDENIQQYAELLISELTTQELQIRSPARTAAACFLIACR
LRETPVRVTRIADASDATKSEILNEKKRISDTLELGIPNDDPTVILEEACEDLSLSDDIQ
TRAQQIADLGAEAGVTSGVSPYTYAAAVLYITSSAADTDLSQTDIADKFDVSTATLRDRR
DDLLDTTGSHLFKLQYPTAPPEAISLVDDLLHHAQTAKWAQGKRHMGILAGAWLYTANKY
QIETSVSELAALTGVSESTIRARSKDFDQPFS
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgcctacagaacctcaaaacgccgtcctcgaacacctaacatcgatccaacagtccttc
actctggacgagaacattcagcagtacgcggaactcctcatttcagaactcacgacgcaa
gaactgcagattcgatcccctgctcgtacggctgcagcatgcttcctcattgcctgtcgc
ttgcgagagactccggttcgcgtgaccaggattgccgacgcttccgatgctaccaaatca
gagattctcaacgaaaagaaacgcatctcggacacgctggagctcggaataccgaatgat
gatccaactgtgatcctcgaagaagcgtgcgaggacctttcgctttctgatgacatccaa
actcgtgcacaacaaatagcagacttgggtgccgaagccggagtcaccagtggtgtctct
ccatatacatacgcggcagctgtactctacatcacaagttcagctgccgacaccgacctc
tcccagaccgatatcgccgacaaattcgacgtatcgacagccacactccgagacagacgt
gacgacctactcgacacaaccggaagccacctgttcaaacttcaatacccgacagcaccg
cccgaagccatctcgctcgtcgacgacctgcttcaccacgcacaaaccgctaaatgggca
cagggcaaacgtcacatgggcatcctcgctggagcatggttgtataccgcgaacaaatat
caaatcgaaactagcgtatcagaactcgcggctctcactggcgtgagtgaatcaacgatc
cgtgctcgctctaaagactttgaccagccgttttcatga
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