Neogale vison (American mink): 122889511
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Entry
122889511 CDS
T08764
Symbol
TBC1D1
Name
(RefSeq) TBC1 domain family member 1 isoform X1
KO
K18341
TBC1 domain family member 1
Organism
nvs
Neogale vison (American mink)
Pathway
nvs04152
AMPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09130 Environmental Information Processing
09132 Signal transduction
04152 AMPK signaling pathway
122889511 (TBC1D1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nvs04131
]
122889511 (TBC1D1)
Membrane trafficking [BR:
nvs04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
122889511 (TBC1D1)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
122889511 (TBC1D1)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
122889511 (TBC1D1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3350
PID
ER
Motif
Other DBs
NCBI-GeneID:
122889511
NCBI-ProteinID:
XP_044080646
LinkDB
All DBs
Position
11:complement(36779421..36999304)
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AA seq
1281 aa
AA seq
DB search
MEPITFTARKHPFPNEPSVDFSLQLVGSLPVHSLTTMPMLPWVVAEVRRLSGQSSKKEPG
ARQVRLCVSPSGLRCEPEPGKSQQWDPLICSSIFECKPQHVHKLIHNSHDPSYFACLIKD
HAASQQSICYVFKADDQTKVPEIISSIRQAGKIARQEELRCPSEFDDTFAKKFEVLFCGR
VTVAHKKAPPALIDECIEKFKHVSGRRRAEFDVGAPRSESPHPAAGPSLPERVPPGPPAG
DGEPGRGPMRKSFSQPGLRSLAFRKEFQDGSLRSRSFFSSFEENDIENHLISGHNIVQPT
DMEENRTMLFTIGQSEVYLISPDTKKIALEKNFKEISFCSQGIRHVDHFGFICRESSGGG
GFHFVCYVFQCTNEALVDEIMLTLKQAFTVAAVQRTAQVPAQLCEGCPLQGLHKLCERIE
GMNSSKTKLELQKHLTTLSNQEQATIFEEVQKSRPRSEQRENELIISFLRCLYEEKQKGH
IHIGEVKQTSQITAENIGSELPPSATRFRLDMLKNKAKRSLTESLESILSRGSKARGLQE
PSASLDLDSSTSSTLRNTSKEPSVCDRETSQATPESSFRLLGSLEDLSSDPESHPAEEPA
PLSPRQSFRRRANTLSHLPVECQEPPEPAQGSPGVSQRKLLRYHSVSTETPRDRNVNHPA
VGESKSCSGQSSAPAPPPRLNPSASSPNFFKYLKHSSSGEPSGNAVPKSISYRNALRKKL
HSSSSVPNFLKFLAPVDENNTSDFMNTKSDFDSKANHLGDGSRTPVKTRRHSWRQQIFLR
VATPQKACDSPSRYEDYSELGELPPRSPLEPVCEDGPFCPVPEEKKRTSRELRELWQKAI
LQQILLLRMEKENQKLQASENDLLNKRLKLDYEEITPCLKEVTTVWEKMLSTPGRSKIKF
DMEKMHSAVGQGVPRHLRGEIWKFLAEQYRLQHPFPSKQQPKDMPYKELLKRLTSQQHAI
LIDLGRTFPTHPYFSAQLGAGQLSLYNILKAYSLLDQEVGYCQGLSFVAGILLLHMGEEE
AFTMLKFLMFEMGLRKQYRPDMIILQIQMYQLSRLLHDYHRDLYNHLEEHEIGPSLYAAP
WFLTVFASQFPLGFVARVFDMIFLQGSEVIFKVALSLLGSHKPLILQHENLETIVDFIKN
TLPNLGLVQMEKTISQVSEMDIAKQLQAYEVEYHVLQEELIDSSPLSDNQRMDKLEKTNS
SLRKQNLDLLEQLQVANGRIQSLEATVEKLLSSESKLKQATLALELERSALLQTVEELRR
QGTAEPHGPEPDFMGPRPAGD
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atggagccaatcacattcacagcgaggaagcatccgtttcctaacgaaccctcggtggac
ttcagcctgcagctggtgggctccttgcctgtacattctctcaccaccatgccgatgctg
ccctgggtcgtggcggaggtgcggaggctcagtggccagtcctccaaaaaggagcctggt
gctaggcaagtccggctttgtgtttccccctctggactgaggtgtgaacccgagccgggg
aaaagccaacagtgggatccgctgatctgttccagcatcttcgagtgtaagccccagcac
gttcacaaactgatccacaacagtcacgatccaagttactttgcttgtctgattaaggac
catgcagccagtcagcagagtatctgctacgtgttcaaagctgacgatcaaacaaaagtg
cccgagatcatcagctccatccgccaggccgggaagatcgcccgccaggaggagctgcgc
tgcccgtccgagttcgacgacacgtttgccaagaagttcgaggtgctcttctgcggccgc
gtgacggtggcccacaagaaggcgccgccggcgctcatcgacgagtgcatcgagaagttc
aagcacgtcagcggccgccgcagagccgagttcgacgtgggcgccccgcgctcggagagc
ccgcatcccgccgcaggcccttccctcccggagagggtcccgccggggccgcccgcgggc
gacggggagccgggccgcgggccgatgcgcaagtccttctcccagcccgggctgcgctcg
ctggccttccgcaaggagttccaggatggcagccttcgcagcaggagtttcttcagctcc
ttcgaggagaacgacatcgagaaccacctcattagcggacacaatattgtgcagccgacc
gacatggaggaaaatcgaactatgctcttcacgattggccaatctgaagtttacctcatc
agtcctgacaccaaaaaaatagcactggagaaaaattttaaggagatatccttttgctct
cagggtatccgacatgtggaccactttgggtttatctgccgagagtcctcagggggtgga
ggctttcattttgtctgctacgtgtttcagtgcacaaacgaagctctggttgatgaaatc
atgctgaccctgaagcaggcgttcaccgtggccgcggtgcagcggacagctcaggtgcct
gcccagctgtgcgagggctgccccctgcagggcctgcacaagctctgcgagcggatagag
ggaatgaattcttccaaaaccaaactagagctccagaagcacctgacgacattaagtaat
caggagcaagcaactatttttgaggaggttcagaaatcaagaccaagaagtgaacagcga
gagaatgaattgattatttctttcctaagatgtttatacgaagagaaacaaaaaggtcat
atccatattggggaggtaaagcagacctcccagatcacagcagagaacattggaagtgag
ttacctccaagtgccactcgatttaggctcgatatgctgaaaaacaaagcgaagagatct
ctaacagagtctttagaaagtattttatcccggggtagcaaagccagaggcctccaggaa
ccctccgccagtctggatctggacagctccacatctagcactttaaggaacacgagcaaa
gagccatctgtgtgtgacagagagacctctcaggccacacctgagagctccttcaggctc
ctcggctccttggaggacctgtccagtgacccggagagccaccccgcagaagagcccgcc
cctttgtcaccccgccagagcttccgaaggcgcgccaacaccctgagccacttgcctgtg
gagtgccaggagcctccggaaccggctcaggggtctccgggggtctcccaaaggaaactt
ctgaggtaccactccgtgagcacagagactcctcgggaccggaatgtgaatcatccagct
gtgggcgagtctaaaagttgctcaggtcagtcttcagctcctgctcctccgcctcgtctt
aacccctccgcctcctcgcccaatttttttaagtacctaaaacatagctcaagtggagaa
ccaagtgggaatgccgtgccgaagagcatctcctaccgtaatgccctgcggaaaaaactt
cattcttcttcctctgtgccaaattttcttaaatttctggctcctgtagatgaaaataac
acctctgactttatgaacacaaaaagtgactttgactccaaagctaaccaccttggcgat
ggcagcaggacccccgtgaagacacggagacactcgtggaggcagcagattttcctccga
gtggccaccccacagaaagcctgcgactctcccagcagatatgaagattattctgaactg
ggagagcttccaccacgatctcctttagaaccagtttgcgaagatggaccattctgcccc
gtcccagaggaaaagaaaaggacctctcgagagcttcgagagttatggcaaaaggctatt
ttacagcagatactgcttctcagaatggagaaggaaaaccagaagctgcaagcctctgaa
aatgacctgctgaacaagcgcctaaagctggattatgaggaaatcactccttgtcttaaa
gaagtaaccacagtgtgggaaaagatgcttagcactccaggaagatcaaaaattaagttt
gacatggagaaaatgcattcggctgttgggcaaggtgtgccacgtcatctccggggggaa
atctggaagttcctagcagagcaataccgtcttcaacacccgtttcccagtaaacagcag
ccaaaggacatgccatacaaagaactcttaaaacggctcacctcccaacagcacgcgatc
cttatcgacctcgggagaaccttcccgacacatccgtacttctctgcccagctcggggcg
gggcagctgtctctctacaacatcctgaaggcctactcgcttcttgaccaggaagtagga
tactgccaaggtctcagctttgtagcaggcattttgctgcttcacatgggtgaggaagag
gcatttaccatgctcaagtttctgatgtttgaaatgggactgcggaaacagtatcggccg
gacatgattattttacagatccagatgtaccagctctcgaggcttcttcacgattaccac
agagacctctacaaccaccttgaggagcacgagatcgggcccagcctctacgccgccccc
tggtttctcaccgtgtttgcctcccagttcccactgggatttgtagccagagtctttgat
atgatctttcttcagggatcagaggtcatatttaaagtggctttaagtctgttgggaagc
cataagcccttgattctgcaacatgaaaacctagaaaccatagttgactttataaaaaac
acccttcccaacctgggcttggtgcaaatggaaaagaccatcagtcaggtgtctgagatg
gatatcgccaaacagttacaagcctacgaagtcgagtaccacgtgcttcaagaagaactt
atcgattcctctcctctcagtgacaaccaaagaatggacaaattagagaagaccaacagc
agcttgcgcaaacagaaccttgacctccttgaacaactgcaggtggcaaacgggaggatc
cagagcctggaagccacggttgagaagcttctgagcagtgaaagcaagctgaagcaggcc
accctcgctttggagctggagcggtcagccctgctgcagacggtggaggagctccggagg
caggggacggcagaaccgcacgggccagagccggacttcatggggcccaggcccgcaggt
gactga
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