Neogale vison (American mink): 122889518
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Entry
122889518 CDS
T08764
Symbol
DHX29
Name
(RefSeq) ATP-dependent RNA helicase DHX29 isoform X1
KO
K18995
ATP-dependent RNA helicase DHX29 [EC:
5.6.2.6
]
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
nvs03012
]
122889518 (DHX29)
Enzymes [BR:
nvs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
122889518 (DHX29)
Translation factors [BR:
nvs03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
122889518 (DHX29)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_DHX29
OB_NTP_bind
Helicase_C
DEAD
DSRM_DHX29
HA2_C
AAA_22
HA2_N
nSTAND3
AAA_16
ATPase
SUIM_assoc
AAA_19
ECSIT_C
Motif
Other DBs
NCBI-GeneID:
122889518
NCBI-ProteinID:
XP_044080664
LinkDB
All DBs
Position
1:231590862..231646781
Genome browser
AA seq
1367 aa
AA seq
DB search
MGGKNKKHKAPGAAAVRAAVSASRAKSAEVGAFGEAQNKKSVARPPPAAAACTREPRVKQ
GPKIYSFNSANDSGGPANLDKSILKVVINHKLEQRIIGVINEHKKQNNDKGVISGRLTAK
KLQDLYMALQAFSFKTKDIEDAMTNTLLQGGDLHSALDWLCLNLSDDALPEGFSQEFEEQ
QPKSRPKFQSPQIPGSVSPPLQPKTKKPEDNKIKPKKEEKNLEVNMKEWILRYAEQEDEE
EKSEKSKSLEEEEKFDPNERYLHLAAKLLDAKEQAASFKLEKNKQGQKEAQEKIRKFQRE
METLEDHPVFNPAIKISHQQNERKKPPVATEEEKPLNFNLFEKSMAATEEEKEKKKEPHD
VRNFDYTARSWTGKSPKQFLIDWVRKNLPKSPNPSFEKVPVGRYWKCRVRVIKSEDDVLV
VCPTILTEDGMQAQHLGATLALYRLVKGQSVHQLLPPTYRDVWLEWSDAEKKKEELNKME
TNKPRDLFIAKLLSKLKQQQQQQQQHPENKRENAEDPEESWENLVSDEDFSALSLESEKA
EDLEPVRNLFRKLQNTPKYQRLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKST
QVPHFLLEDLLLNEWGTSKCNIVCTQPRRISAVSLATRVCDELGCENGPGGRNSLCGYQI
RMESRASESTRLLYCTTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQ
KRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDIIEETGFVLEKDSEY
CQKFLEEEEEISINVTSKAGGIKKYQEYVPVHTGPSADLNPLYHKYSSRTQHAILYMNPH
KINLDLILELLIYLDRSPQFRNIEGAVLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIAL
HSILSTQDQAAAFTIPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMS
SLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEELCLHIM
KCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPTLTPLGQHLAALPVNVKIG
KMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAKSALAMADSDHLTIYNAYL
GWKKARQEGGCRSEIAYCRRNFLNRTSLLTLEDVKQELIKLVKAAGFSSSTTPNDWEGNR
ASQTLSFQEIALLKAVLAAGLYDNVGKIIYTKSVDVTEKLACIVETAQGKAQVHPSSVNR
DLQTYGWLLYQEKVRYTRVYLRETTLITPFPVLLFGGDIEVQHRERLLSIDGWIYFQAPV
KIAVIFKQLRVLIDSVLRKKLENPKMSLENDKILQIITELIKTENHN
NT seq
4104 nt
NT seq
+upstream
nt +downstream
nt
atgggaggcaagaacaagaaacacaaggcaccgggagccgcggcggtccgggccgcagtg
tctgcttccagagccaaatccgccgaggtcggagcttttggggaggcccaaaacaagaag
tccgtggccaggccgccccccgccgctgccgcctgcaccagggagccccgagtcaaacaa
ggtccgaaaatttatagttttaattctgcaaatgattctggtggccctgctaatctggat
aaatctattttgaaagtggtaattaatcacaaactagagcaacgaattattggagtgata
aatgagcataaaaagcaaaataatgacaagggagtgatttctggaagacttactgccaaa
aaattacaggatttatacatggctttacaagcattttcatttaagactaaggacattgaa
gatgccatgactaacacacttttacagggaggtgatctccattctgccttggattggctc
tgtttaaatctttcagatgatgcacttcctgaaggattcagtcaagaatttgaagaacag
caacctaaaagtaggccaaaattccagtctcctcaaataccaggctctgtttcacctcca
ctgcagcctaaaaccaaaaaaccagaagataataagattaagccaaaaaaggaagaaaaa
aatttggaagtaaatatgaaagaatggatcctacgctatgctgaacaggaagatgaagaa
gaaaagagtgagaagtctaaaagtttagaagaggaggaaaaatttgaccctaatgaaaga
tacttgcaccttgcagcaaaacttctggatgcgaaggaacaagcagcttcctttaaacta
gaaaaaaacaagcaaggccaaaaagaggctcaagaaaaaataaggaaatttcaaagagaa
atggaaactttagaagaccatccagtattcaatccagccataaagatttcacatcaacag
aatgaaagaaaaaagcctcctgtagccacagaagaggaaaagcctttgaactttaacctg
tttgaaaaatccatggctgctactgaagaagagaaagagaaaaagaaggaacctcatgat
gtaagaaattttgactatacagctcgaagctggactggaaaatctcccaaacaatttctg
atcgattgggtcaggaagaatcttcctaagagtccaaatccttcctttgaaaaagttcca
gtaggtagatactggaaatgtagggtaagggtaatcaagtctgaagatgatgtactggta
gtgtgccctacaatcttaacagaagatggcatgcaagctcagcacctgggagcaactcta
gctctttaccgtttagtgaaagggcagtcagtgcatcagttacttcctcccacttaccga
gatgtttggctggagtggagtgatgcagaaaagaaaaaggaagaattaaataaaatggaa
accaataaaccccgtgatctgtttattgccaaacttctgagcaaattgaaacagcagcag
caacagcagcaacagcatcctgaaaataagagagaaaacgctgaagatcctgaggaatct
tgggaaaatttagtttctgatgaagatttttctgcactgtccttggaatcagaaaaggca
gaagatttggaacctgttagaaacctgtttagaaagttacaaaacacaccgaaataccag
agacttctaaaggaaaggcaacagttacctgtgttcaaacatagggattcaatcgtggaa
actcttaaaaggcatcgggtagtggttgtggcaggtgaaacagggagtggcaaaagtact
caagtaccacattttctcttggaagatttgcttctaaatgagtggggaacgagtaagtgt
aacattgtctgcactcagccccgaagaatctcagcagtgagtttagccacaagagtatgt
gatgagttgggctgtgaaaatggacctggaggaaggaattctttgtgtggatatcagatc
cggatggaatctcgagctagtgaatctacaaggttactgtattgtacaacaggggttttg
cttaggaaacttcaagaagatggtctcctaactaatgtgtctcatgttattgtagatgag
gttcatgaaagaagtgtccagtcagacttcttattgattatcttgaaggaaattttacag
aaacggtctgatctgcacttgattctaatgagtgccactgtagacagtgaaaagttttct
acatatttcacacactgcccaattctcagaatttcaggaagaagctatcctgttgaggtt
tttcaccttgaagatataatagaagaaacaggctttgtactggagaaagactccgaatac
tgtcagaaatttttggaggaggaagaagaaatttccattaatgttacaagcaaagcaggg
ggaataaaaaagtatcaggaatatgtaccagttcacactggaccaagtgctgatttaaat
ccactttatcacaagtacagcagccgcactcagcatgctattctctacatgaatccccat
aaaatcaacctggatctcattttggaacttcttatatacttagacagaagtccccaattc
agaaatattgaaggagcagtattgatctttttaccaggacttgcacatattcagcagttg
tatgatctcctgtcaactgacagaagatttttttctgaacgatataaagtgatagctctg
cattctattctttcaactcaagatcaagctgcagcattcacaattcctcctcctggagtc
aggaagattgtcttagcaacaaatatcgcagaaacaggtatcactattccagatgttgta
tttgtaattgacactggaagaacaaaagaaaataagtaccatgaaagcagtcagatgagt
tctttggttgagacgtttgtcagtaaagcaagtgctctgcagcggcaggggagagctgga
agggtccgagatggcttctgcttcagaatgtacacaagagaaagatttgaaggctttatg
gattattctgtccctgaaatcttgcgtgtacctctggaggaattatgtcttcacattatg
aaatgcaatcttggttctcctgaagatttcctctccaaagccttagatcctcctcagctt
caagtaatcagcaatgcaatgaatttactccgaaaaattggagcatgtgaactaaatgag
cctacactgactccactgggccaacaccttgcagctctgcctgtgaatgtcaagattggc
aagatgcttatttttggtgccatatttggttgccttgacccagtggcaacactagctgca
gtgatgaccgagaagtctccttttactacaccaattggtcggaaagatgaggcagatctt
gccaaatcagctttggctatggccgattcggaccacctaacgatctacaacgcatatcta
ggatggaaaaaagcacggcaagaaggcggctgtcgttctgaaatagcatactgccggaga
aactttcttaatagaacatctctgttaaccctagaggatgtaaagcaagaattaatcaag
ttggttaaggcagcaggattttcatcatccacaacacccaatgactgggaaggaaacaga
gcctcacagaccctttccttccaagaaattgcccttcttaaagctgtactggctgctgga
ctatatgacaatgtggggaagataatctatacaaaatcagttgatgttacagaaaaattg
gcttgcattgtggagacagcccaaggcaaagctcaagtacatccatcctcagtaaatcga
gatttgcagacttatggatggctcttataccaggagaaggtaaggtatacccgagtatat
ctgagggaaactaccctaataaccccttttccagttttactttttggtggtgatattgaa
gttcaacaccgggaacgtcttctttccattgatggctggatctattttcaggctcctgta
aaaatagctgtcattttcaagcagcttagagttctcattgattctgttttaagaaaaaag
cttgaaaatcctaagatgtcccttgaaaatgacaagattctgcagatcattacagaattg
ataaaaacagagaatcataactga
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