Neogale vison (American mink): 122889589
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Entry
122889589 CDS
T08764
Symbol
LRBA
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein isoform X1
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nvs04131
]
122889589 (LRBA)
Membrane trafficking [BR:
nvs04131
]
Endosome - Lysosome transport
Others
Others
122889589 (LRBA)
Endosome - Golgi transport
122889589 (LRBA)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
122889589 (LRBA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Laminin_G_3
Neurobeachin
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR75_1st
WD40_WDHD1_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Cnd3
Beta-prop_WDR90_POC16_2nd
WDR55
EIF3I
KNTC1_N
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_Vps41
SUKH_6
Motif
Other DBs
NCBI-GeneID:
122889589
NCBI-ProteinID:
XP_044080817
LinkDB
All DBs
Position
11:142322215..143054160
Genome browser
AA seq
2861 aa
AA seq
DB search
MASEDNNVPSPPPTGDDGGGGGKEETSAEEGALSLKPGLPIRGIRMKFAVLTGLVEVGEV
SNRDIVETVFNLLVGGQFDLEMNFIIQEGESIICMVDLLEKCDITCQAEVWSMFTAILKK
SIRNLQVCTEVGLVEKVLGKIEKVDNMIADLLVDMLGVLASYNLTVRELKLFFSKLQGDK
GQWPPHAGKLLSVLKHMPQKYGPDAFFNFPGKSAAAIALPPIAKWPYQNGFTFHTWLRMD
PVNNINVDKDKPYLYCFRTSKGLGYSAHFVGGCLIITSIKSKGKGFQHCVKFDFKPQKWY
MVTIVHIYNRWKNSELRCYVNGELASYGEITWFVNTSDTFDKCFLGSSETADANRVFCGQ
MTAVYLFSEALNAAQIFAIYQLGLGYKGTFKFKAESDLFLAEHHKLLLYDGKLSSAIAFT
YNPRATDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVLTHSIQSAMHSIGGVQVLFPLF
AQLDYRQYLSDEVDVTICSTLLAFILELLKNSVAMQEQMLACKGFLVIGYSLEKSSKSHV
SRAVLELCLAFSKYLSNLQNGMPLLKQLCDHILLNPAIWIHTPAKVQLTLYTYLSTEFIG
TVNIYNAIRRVGTVLLITHTLKYYYWAVNPQDRSGITPKGLDGPRPNQKEILSLRAFLLM
FIKQLVMKDSGVKEDELQAILNYLLTIHEDDNLMDVLQLLVALMSEHPNSMIPAFDQRNG
LRVIYKLMASTSEGIRVQALKAMGYFLKHLAPKRKAEVMLGHGLFSLLAERLMLQTNLIT
MTTYNVLFEILIEHICTQVIHKQHPDPDSSVKIQNPQILKVIATLLRNSPQCPESMEVRR
AFLSDMIKLFNNSRENRRSLLQCSVWQEWMLSLCYFNPKNSDEQKITEMVYAIFRILLYH
AVKYEWGGWRVWVDTLSITHSKVTFEIHKENLASMFREHQGKVDEEIGQCSSPVEAVSAI
IRDVNVSIASQQSDMKACPVSPRITRNSDEKSPVEQTISVDCASNAELQTPNTSNEERKT
GQESQELLDEVPSEETLINETINTGDLQVSSDMIEAEAETVSSNSFKMNGKDIMTVSEVT
ASISSPSEEDASEVPELLDKSIGEEDDDDYVELKVENSPTEEASLPTELQEDRLSPAASE
ASERLDMLSNDNKLIFQEQESVSKKQIDSETQDSKDSGILTMTASGSSATSPDTTVSQTP
VQSDIGEMLEEGKKTTNFVRETKLIGDSPVFESPTTSEQRIAKLDVSSVVTDTERLELKA
NTNMEASQPHQPIPEMSRRQEEPGQGVAPVGVNGHRRDSRSAMFRIPEFKWSQMHQRLLT
DLLFSIETDIQMWRSHSTKTVMDFVNSSDNVIFVHNTIHLISQVMDNMVMACGGILPLLS
AATSATHELENIEPTQGLSIEASVTFLQRLISLVDVLIFASSLGFTEIEAEKSMSSGGIL
RQCLRLVCAVAVRNCLECQQHSQLKARGDTAKGQKTMHSLIPMGKSAAKSPVDIVTGGIS
PVRDFDKLLQDMDINRLRAVVFRDIEDSKQAQFLALAVVYFISVLMVSKYRDILEPQNER
HNHSFKETDNERGNSSLSDVENTSSAFSPLTPASVEESESTSSTRRRDSGIGEETAAGLG
NSGDVAPLSVPPSVSAGPDAISEALCTLSLEVNKSQETKNDGGNELDNKAAPSVPVSKNV
NVKDILRSLVNIPADGVTVDPALLPPACLGALGDLSIEQPVQFRSFDRSVIIATKKSAVL
PSTLTASLPTNAVSVVSSVDSSQASDVGGESPGGRSSNAKLPSVPTVGSVPQDQVSNMSI
TERLEHALEKAAPLLREIFVDFAPFLSRTLLGSHGQELLIEGTSLVCMKSSSSVVELVML
LCSQEWQNSIQKNAGLAFIELVNEGRLLSQTMKDHLVRVANEAEFILSRQRAEDIHRHAE
FESLCAQYSADKREDEKMCDHLIRAAKYRDHVTATQLIQKIINILTDKHGAWGNSAVSRP
REFWRLDYWEDDLRRRRRFVRNPLGSTHPEATLKTAVEHAADEDILAKGKQSIKSQALGN
QNSENEILLEGDDDTLSSVDEKDLENLAGPVSLSTPAQLVAPSVVVKGTLSVTSSELYFE
VDEEDSHFKKIDPKILAYTDGLHGKWLFTEIRSIFSRRYLLQNTALEIFMANRVAVMFNF
PDPATVKKVVNYLPRVGIGTSFGLPQTRRISLASPRQLFKASNMTQRWQHREISNFEYLM
FLNTIAGRSYNDLNQYPVFPWVITNYESEELDLTLPSNFRDLSKPIGALNPKRAAFFAER
YESWEDDQVPKFHYGTHYSTASFVLAWLLRIEPFTTYFLNLQGGKFDHADRTFSSISRAW
RNCQRDTSDIKELIPEFYYLPEMFVNFNNYNLGVMDDGTVVSDVELPPWAKTSEEFVRIN
RLALESEFVSCQLHQWIDLIFGYKQLGPEAVRSLNVFYYLTYEGAVNLNSITDPVLREAV
EAQIRSFGQTPSQLLIEPHPPRGSAMQVYLLLQSPLMFTDQAQQDVIMVLKFPSNSPVTH
VAANTQPGLATPAVITVTANRLFAVNKWHNLPAHQGAVQDQPYQLPVEIDPLIASNTGMH
RRQITDLLDQSIQVHSQCFVITSDNRYILICGFWDKSFRVYSTDTGKLIQVVFGHWDVVT
CLTRSESYIGGNCYILSGSRDATLLLWYWNGKSSGIGDNPGSETSTPRAILTGHDCEITC
AAVCAELGLVLSGSKEGPCLIHSMNGDLLRTLEGPENCLKPKLIQASREGHCVIFYENGC
FCTFSVNGKLQATMETDDNIRAIQLSRDGQYLLTGGDNGVVMVWQVSDLKHLFTYPGCDA
GIRAMALSYDQRCIISGMASGSIVLFYNDFNRWHHEYQTRY
NT seq
8586 nt
NT seq
+upstream
nt +downstream
nt
atggctagtgaagacaataatgtcccttccccgccaccaacaggtgatgacgggggaggt
ggagggaaagaagaaacctctgctgaagagggtgcattgtccctgaaaccagggctcccc
atcaggggcatcagaatgaagtttgccgtgttgacggggttggttgaagttggagaagta
tccaatagggatattgtagaaactgtctttaacctgctggtaggagggcagtttgatttg
gaaatgaatttcattatccaagaaggtgagagtatcatctgcatggtggacctactagaa
aaatgtgatattacttgccaagcagaggtctggagcatgtttacagcgattctgaagaaa
agcatacgaaatcttcaagtctgcactgaagtaggccttgttgagaaggtgcttgggaag
attgagaaagttgacaatatgatagcagatcttttggttgacatgttgggagtgctggct
agctataatttgaccgttcgagaactaaagctattcttcagtaaacttcaaggagataaa
ggacaatggcctccacatgctgggaagttgctatctgtgttaaagcatatgcctcagaag
tatggtcctgatgcctttttcaactttccaggaaagagtgctgcagccattgcattacct
cctatagccaagtggccgtaccagaatggttttacatttcatacctggctaagaatggat
cctgtaaataacatcaatgtggataaggataaaccatatttatattgtttcagaacaagc
aaaggtcttggttattctgctcactttgttgggggctgtttgattataacatcaataaag
tcaaaaggaaaaggctttcagcactgtgtgaaatttgattttaagccacaaaagtggtat
atggtaactatagtgcatatttataaccggtggaagaatagtgagcttcgttgttatgtg
aatggtgagctagcttcctatggagagataacatggtttgtcaacaccagtgataccttt
gacaaatgtttcctgggctcatcagaaacagcggatgctaatagagtattttgtggccag
atgactgcggtttacctttttagtgaggctcttaatgctgctcagatttttgctatttat
cagttgggcctgggatataagggtacatttaaattcaaagcagaaagtgatttgtttctt
gctgagcatcacaaacttttattgtatgatggcaaactgtctagtgccattgcattcaca
tataatccacgtgctacagatgcccagctctgccttgaatcatcccctaaggacaatcct
tcaatttttgttcattcaccgcatgcacttatgctccaggatgtgaaggcagttttaaca
cattccattcaaagtgctatgcattcaattggaggagtacaagtgctgtttccacttttt
gcacagttggattataggcaatatttatctgatgaggttgacgtgactatatgttcaact
ttgctggctttcatcctggagttgctgaagaactcagttgctatgcaggagcagatgctt
gcctgcaagggcttcttggtaataggatacagtcttgagaagtcttccaaatcccatgtc
agcagagcagtacttgaactttgtcttgcattttcaaaatatctgagtaatctgcagaat
gggatgcccctactcaaacagttgtgtgatcacattcttcttaacccagctatatggatt
cataccccagccaaggttcagttgacactctatacttacctatccacggaattcattggt
acagtcaacatatataatgccattcggagagttggaacagtgcttctcatcacgcataca
ctgaagtactactactgggcagtgaatcctcaggatcgaagtggtatcacgcctaaagga
ttagatggaccacgacctaatcaaaaagaaatactttctctacgagcattcttgttgatg
ttcattaagcagttagtgatgaaggattctggagtaaaggaagatgaactgcaggccatt
cttaattacctcctcactatacatgaggatgacaatctaatggatgtcctacaactgctt
gttgcattaatgtcagaacaccctaactctatgattcctgcttttgaccaaaggaatgga
ttacgtgtcatctataaacttatggcatcaacaagtgaaggaatcagagtacaagctctc
aaggcaatgggctattttttaaagcacctggcaccaaaaagaaaagctgaagttatgctt
ggacatggattattttcattgctagcagaaagactcatgcttcagacaaatttaatcaca
atgaccacatacaatgttttgtttgagattcttatagagcatatttgtactcaagtgata
cacaaacagcatccagatcctgattcttcagtaaagattcaaaatcctcagatactaaaa
gtaattgcaaccctacttcgaaattctccccagtgtccagagagcatggaagttcgcaga
gcctttctttctgacatgattaaactttttaataacagtagagaaaacagaaggagcttg
ctacagtgttctgtatggcaagagtggatgctttctctttgctatttcaatcctaagaat
tctgatgagcaaaagataacagaaatggtgtatgccatattcagaatcctactttaccat
gcagtcaaatatgagtggggtggctggcgtgtgtgggtagacaccttatcaatcacacat
tcaaaggtcacttttgaaatacacaaagaaaatcttgccagtatgttcagggaacaccag
ggaaaagttgatgaagaaatagggcaatgttcaagtccagttgaagcagtctctgccatt
atcagggatgttaatgtttcaatagcatcccagcaatcagatatgaaggcttgtcccgta
tctcctcgtatcaccagaaatagtgatgaaaagtcacctgttgagcagacaatttcagta
gactgtgcttccaatgctgaactgcaaactcctaatacatctaatgaagaaaggaaaact
ggccaagaaagtcaggagttactagatgaagtcccttcagaggaaacattgataaatgaa
acaattaatacaggtgatttacaagtatcctctgatatgatagaagctgaagccgagact
gtttcctctaactcttttaaaatgaatggcaaagatataatgactgttagcgaagtaact
gcttctataagttctccttcagaagaggatgcctcagaggtgccagaattattggataag
tctataggagaggaagatgatgatgattatgtagaattgaaggtagaaaatagtcctact
gaggaagccagtctgcccacagagctccaagaagatcgtttgtctccagctgcatctgaa
gccagtgaaagactggacatgcttagtaatgacaacaaattaatatttcaagaacaagaa
tctgtaagtaagaagcaaattgacagtgaaactcaagattccaaagattctggaatcttg
acgatgacagcatcagggtcttcagctacctcaccagatactactgtttcccagacacct
gtacaatcagatattggtgagatgctagaggaagggaaaaaaacaactaattttgtgaga
gaaaccaaattaattggtgattctcctgtctttgagtctcctactacttctgagcagagg
attgctaaattggatgtttccagtgttgttacagatactgaaagattggaattgaaggcc
aatacaaatatggaagcatctcaacctcatcaacctatacctgagatgtcaagacggcag
gaggaaccaggtcaaggagttgcaccagttggagttaatggacataggagggattccaga
tctgctatgtttcgtattcctgaattcaaatggtctcaaatgcatcagcgtttgctcact
gatctattattttcaatagaaacagatatacagatgtggagaagccattcgacaaagaca
gttatggacttcgtgaatagcagtgataatgtcatctttgtacacaacacaattcatctc
atctctcaagtgatggacaatatggtcatggcttgtgggggtatactgccattgctttca
gcagctacatcggctacacatgagctggagaatattgaacctactcagggcctttcaata
gaagcctctgtgacatttttgcagaggctaatcagccttgtggatgtgcttatatttgca
agttctcttggctttactgaaattgaagctgaaaaaagtatgtcttcgggtggaattttg
cgacagtgtctccgactagtctgtgcagtggcagtaaggaattgtttagagtgtcaacag
cattcacaactgaaagctagaggagatacagccaaaggccagaaaacaatgcacagcctg
attcccatggggaaatctgcagcaaagagtcctgtggatattgtaactggtggtatatct
ccagtaagagattttgacaagctcctacaagacatggatattaatcggcttagggcagtt
gtcttcagagacatagaggatagcaaacaagctcaatttttagccttggcagttgtatac
tttatttctgttcttatggtctcaaagtatagagatattttggaaccccaaaatgaaagg
cataaccactcatttaaggaaactgataatgaacgtgggaattcatcactttctgatgta
gaaaacacatcatcagcattcagtccattaacaccagcatcagtggaagaatctgaaagc
acatcatctacacgaaggagggactcaggcattggggaagaaactgctgccggcttagga
aacagtggggatgtagctcctctaagtgtacctccaagtgtcagtgcaggtccagatgca
atcagtgaggcactgtgtactctttctttagaagtcaataaatctcaggaaaccaaaaat
gacggaggaaatgagttggataacaaggctgcgccatcagttccagtttcaaaaaatgtc
aatgtaaaggacattcttcgaagtttggttaatatacccgcagatggagtcacagtggat
cctgcccttctgccaccagcctgccttggagctcttggtgatctatctattgaacaacct
gtgcagttcagatcttttgatagaagtgtcatcattgcaacaaaaaaatcagcagtctta
ccttctacacttactgcaagtctacctaccaatgctgtcagtgtggtttcttcagtagat
tcaagccaagcctcagatgtaggaggagaatcacctggtggtagatcatctaatgcaaaa
ttgccatcggtgccaacagttggctcagttccacaagaccaagtttcaaatatgagtatt
acagagaggcttgaacatgctttggaaaaggcagctcctcttctgcgagagatttttgtg
gattttgcaccttttctttctcggacacttttgggtagtcatggacaagaactgcttata
gaaggaacaagtctggtttgcatgaagtctagtagttcggttgtggaattggttatgcta
ctgtgttctcaggagtggcagaattctatccagaagaatgcaggccttgcttttattgaa
cttgtcaacgaaggaaggttgcttagccaaacaatgaaggatcatctagtaagagtagca
aatgaagctgaatttatcctgagcaggcaacgagcagaggatattcacagacatgcagaa
tttgagtcactgtgtgcccagtattcagcagacaaacgagaagatgagaagatgtgtgat
catctgataagagcagctaaatatcgggaccatgtgacagcaactcagctaatccagaaa
attatcaacattctcacagacaagcatggagcctggggaaattctgcagtgagtcgtcct
cgtgagttctggcgccttgactactgggaagatgacttgcggcgccggcgacgatttgtg
cgtaaccctctaggatcgacacatcctgaagcgacactaaaaacagccgtggaacatgct
gcagatgaagatatccttgctaaaggaaaacagtccatcaagagtcaggctttaggaaat
cagaactcagaaaacgagatcctcctggaaggcgacgacgatactctgtcatccgtggat
gagaaagatttagagaatctcgctggtcctgttagcctgagcacaccggctcagcttgtg
gccccctctgttgtagtaaagggcactctttctgtcacctcctccgaactctattttgag
gtggatgaagaggactctcacttcaagaaaatcgaccccaagatcctggcatatacagat
gggctgcatggaaaatggctattcacagagatacgatcaatcttttctcgtcgttatctt
ttgcaaaatacagctttggagatctttatggcaaacagagttgctgtaatgttcaacttc
ccagaccctgcaacagtaaagaaagtggttaattatctacctcgtgttggtattggaacc
agttttggtttacctcaaaccaggcgtatctcattagctagtccacgtcaactctttaaa
gcttctaatatgactcagcgatggcagcatagagagatttcaaattttgagtatttgatg
tttctcaacacaatagcaggacggagttacaatgacttaaatcagtatccagtgtttccc
tgggtcatcactaattatgaatcagaagaactggatcttaccttgccaagcaacttcaga
gatttgtccaagcctataggagctttgaatccaaaaagagcagcattctttgcagagcgt
tatgaatcatgggaagatgatcaagttccaaagttccactatggtactcattactcaact
gcaagttttgttcttgcatggctgctaagaatagaacctttcacaacttatttcctcaat
ttgcaagggggtaaatttgatcatgcagatcgaactttttcatcaatttccagagcttgg
cgaaactgtcagcgtgatacatctgatattaaggagttgatccctgaattttattatctc
cctgagatgtttgtcaacttcaataattataatcttggagtgatggatgatgggacagta
gtgtctgatgttgaacttcctccttgggccaaaacctcagaagaatttgttcgcataaac
agattggccctggagagtgaatttgtttcctgccagcttcaccaatggattgatctcatt
tttggctataaacaactaggaccagaggctgttcgatccctcaatgtgttctattacctg
acctatgaaggagctgtcaatctgaattcaataactgatcctgtattgagagaggctgtt
gaagctcaaattcgaagttttggacagacgccttctcaactgcttatagagccccatcct
cccagaggttctgctatgcaagtgtatctcctcctgcagagtccattgatgttcacagac
caagcccagcaggatgttatcatggtcctaaagtttccctccaactcccctgtcactcat
gtggcagctaacacccagcctggcttggcgactcctgctgtgatcacagtcactgctaac
aggctctttgccgtgaacaagtggcacaaccttcctgctcatcaaggtgcagtacaagac
cagccataccagctgccagtggaaatcgatcctctcatagccagcaatacaggaatgcac
cggaggcaaatcactgaccttttagaccaaagtattcaagtccattcccagtgctttgtc
atcacttcggacaaccgctatattctcatctgtggcttctgggataagagtttccgagtc
tactctactgacacaggaaaattgattcaggtggtatttggccattgggatgtggtcact
tgcctcactcgatctgagtcctatattgggggaaattgctacattctctcaggatcacgt
gacgcgacccttctgctctggtactggaatggaaaaagcagcgggattggagataaccca
ggcagtgagaccagcactcctcgggccattctaacaggccacgactgtgagatcacctgt
gctgccgtctgtgctgagctgggcctggtgttaagtggctccaaagaaggaccatgtctc
atacattccatgaatggagacttactaaggactttggagggtcctgagaactgcctgaaa
ccgaaactcattcaggcttcaagagagggtcattgtgtcatattctatgaaaatggctgc
ttctgtacattcagtgtcaacgggaaacttcaggccactatggaaacagatgataacata
agagccatccagctgagccgagacgggcagtacctgctcacaggaggagacaacggtgtg
gtcatggtctggcaggtgtctgacctcaagcacctcttcacctatccaggctgcgatgct
ggcatccgggccatggccctgtcttacgaccagaggtgcatcatttctggcatggcctcg
ggaagcatcgtcctgttttacaacgactttaaccggtggcatcatgaataccaaacccgc
tactga
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integrated database retrieval system
