Neogale vison (American mink): 122889622
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Entry
122889622 CDS
T08764
Symbol
USP38
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 38
KO
K11854
ubiquitin carboxyl-terminal hydrolase 35/38 [EC:
3.4.19.12
]
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nvs01002
]
122889622 (USP38)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nvs04121
]
122889622 (USP38)
Enzymes [BR:
nvs01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122889622 (USP38)
Peptidases and inhibitors [BR:
nvs01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122889622 (USP38)
Ubiquitin system [BR:
nvs04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122889622 (USP38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usp38-like_N
UCH
UCH_1
HPF1
Motif
Other DBs
NCBI-GeneID:
122889622
NCBI-ProteinID:
XP_044080895
LinkDB
All DBs
Position
11:complement(149249105..149286304)
Genome browser
AA seq
1042 aa
AA seq
DB search
MDKILEGLVSSSHPLPLKRVIVRKVVESAEHWLDEAQCEAMFDLTTRLILEGQDPFQRQV
GHQVLEAYARYHRPEFESFFNKTFVLGLLQQGYHSLDRKDVAILDYIHNGLKLIMSCPSV
LDLFSLLQVEVLRMVCERPEPQLCARLSDLLTDFVQCIPKGKLSVTFCQQLVRTIGHFQC
VSTQEKELREYVSQVTKVSNLLQNIWKAEPSTLLPSLQEVFASISSTDSSFEPSVALASL
VQHIPLQMITVLIRSLTTDPNVKDASMTQALCRMIDWLSWPLAQHVDTWVIALLKGLAAV
QKFTILIDVTLLKIELVFNRLWFPLVRPGALAVLSHMLLSFQHSPEAFHLIVPHVVSLVH
SFKSDGLPSSTAFLVQLTELIHCMMYHYSGFPDLYEPILEAIKDFPKPSEEKIKLILSQS
AWTSQSNSLASCLSRLSGKSETGKTGLINLGNTCYMNSVIQALFMATDFRRQVLSLNLNG
CNSLMKKLQHLFAFLAHTQREAYAPRVFFEASRPPWFTPRSQQDCSEYLRFLLDRLHEEE
KILKVQSSHKPSESLGCNESSLQEVASKAAVLAESPCTSDGEKTLIEKMFGGKLRTHICC
LNCRSTSQKVEAFTDLSLAFCPSSSVENLSFQDPASSASTQDGGLTQASVPGPSEEPGVY
NPATAAFVCDSAMNERMLGSPSDEFCCTENTCVPSESSTILVNKDVPQKPGGGSTPSVTD
LLNYFLAPEILTGDNQYYCENCASLQNAEKTMQITEEPEYLILTLLRFSYDQKYHVRRKI
LDNVSLPLVLELPVKRTTSFSSLSESWSIDVDFTDISENLAKKLKPSGTEETCCSRLVPY
LLSSVVVHSGISSESGHYYSYARNITGTESSYQMCHQSETLALASSQSHFLERNSPSAVI
EQDLENKEMSKEWFLFNDSRVTFTSFQSVQKITSRFPKDTAYVLLYKKQNSTNGLNGNSS
TSGLWVNGDPPLQKELMDAITKDNKLYLQEQELNARARALQAASASCSFRPNGFDDNDPP
GSCGPTGGGGGGGFNTVGRLVF
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggacaagatcctggagggcctggtgagttcttcgcacccactgcccctaaagcgggtg
attgtgcggaaggtggtggaatcggcggagcattggctagacgaggcgcagtgtgaagcc
atgtttgacctgaccacccggctcattctggagggccaagaccccttccagcggcaggtg
gggcaccaagtgctggaggcctatgcgcgataccaccggccagaattcgagtccttcttc
aacaagacgttcgtgctgggcctccttcagcagggctaccactcgctggacaggaaggac
gtagccattctggactacattcacaacggcctgaagctgatcatgagctgcccatcggtg
ctggacctcttcagcctgctgcaagtagaggtgttacgtatggtgtgtgagaggccggag
ccgcagctgtgtgcccgattgagcgacctcctgaccgacttcgtgcagtgcatcccaaag
ggaaaactgtccgtcaccttctgtcaacagcttgttcgaacgataggccatttccagtgc
gtgtccacccaggagaaggagctgcgggaatatgtctctcaggtgacaaaagtgagtaac
ttactgcagaacatctggaaggccgagccctccacactcctgccttccctgcaggaagtt
tttgcaagcatttcttccacagattcatcatttgaaccttctgtagcattggcaagcctt
gtgcagcatattccccttcagatgattacagttctcatcaggagcctaactacggatcca
aatgtaaaagatgcaagtatgacccaagctctttgcagaatgattgactggctgtcctgg
ccattggctcagcatgtggatacatgggtgattgcactcctaaaaggactggcagctgtc
cagaagtttactattttgatagatgttactttactgaaaatagaactggtttttaatcga
ctttggtttcctcttgtgagacctggtgctcttgcagttctttctcacatgctgctcagt
tttcagcattctccagaggcgttccatctgattgttcctcacgtagttagtttggttcac
tccttcaaaagtgatggtctgccttccagtacagccttcttagtgcagttaacagaactg
atacactgtatgatgtatcattattctggatttccagatctctacgaacctattttggaa
gcaataaaggattttcctaagcccagtgaagagaagatcaaattgattctcagtcaaagt
gcctggacttctcaatccaattctttggcctcttgcttgtctagactttctggaaaatct
gaaactgggaaaactggtcttattaatctaggaaatacatgttatatgaacagtgttata
caagcattgtttatggctacagatttcaggagacaagtattatctttaaatctaaatggg
tgcaattcattaatgaaaaaactacagcatctctttgcctttttggctcatacacagaga
gaagcatatgcacctcgggtattctttgaggcttctagacctccatggtttacccccaga
tcacagcaagactgttctgaatacctcaggtttctgctagacaggctacatgaagaagaa
aagatcttgaaagttcagtcctcacacaagccatctgaaagtctggggtgcaatgaatct
tctttacaggaagtagccagtaaggcagctgtactagcagagagcccttgcacaagtgat
ggtgagaagactttaatagaaaaaatgtttggaggaaaactacgaactcatatatgttgt
ttgaactgcaggagtacctcacaaaaagtggaagcctttaccgatctttcactggccttt
tgtccttcctcttctgtcgaaaacttgtcttttcaagatccagcatcatcagccagtaca
caagatggtggcctaacgcaagccagtgtacctggtccttcagaagaaccaggagtttat
aatccagcaacagctgcctttgtttgtgactcagctatgaatgaaagaatgttaggcagt
ccttctgatgagttttgctgtactgaaaacacttgtgtccccagtgaatctagcacaatt
cttgttaataaagatgtacctcagaaaccaggaggtggaagcacaccttcagtaactgac
ttactaaattattttttggctccagagattcttactggtgacaaccagtattattgtgaa
aactgtgcctctttgcagaatgctgagaaaactatgcaaatcacggaggagcctgagtac
cttattcttactctcctgagattttcatatgatcaaaagtatcatgtgagaagaaagatt
ttagacaacgtgtcactgccactggttttggagttgccagttaaaagaactacttctttc
tcttcattgtcagaaagttggtctatagatgttgacttcactgatattagtgagaaccta
gctaaaaaattaaagccttctggaactgaagaaacttgctgctccagattggtgccatat
ctattaagttctgttgttgttcactctggtatatcctctgaaagtgggcattactattct
tacgccagaaacatcacaggtacagagtcctcataccagatgtgccatcagtctgagact
ctggcgttagcatcctcccaaagtcatttcctagagagaaatagtcccagtgcagttatt
gaacaggatttagagaataaggaaatgtcaaaagaatggtttttatttaatgacagcaga
gtgacatttacttcatttcagtcagtccagaaaattacgagtaggtttccaaaggacaca
gcttatgtgcttttgtataaaaaacagaatagcactaatggtttaaatggtaacagttca
accagtggactctgggtaaatggagacccacctctacagaaagaacttatggatgctata
acaaaagacaataaactatatttacaggaacaagagttgaatgctcgagcccgggcccta
caagctgcatctgcctcctgttcatttcggcccaatggatttgatgataatgacccacca
ggaagctgtggaccaactggtggagggggtggaggaggatttaatacagttggcagactc
gtattttga
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