Neogale vison (American mink): 122889707
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Entry
122889707 CDS
T08764
Symbol
FDFT1
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
nvs
Neogale vison (American mink)
Pathway
nvs00100
Steroid biosynthesis
nvs01100
Metabolic pathways
Module
nvs_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
122889707 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
nvs01006
]
122889707 (FDFT1)
Enzymes [BR:
nvs01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
122889707 (FDFT1)
Prenyltransferases [BR:
nvs01006
]
Terpene biosynthesis
Squalene/phytoene synthase
122889707 (FDFT1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
HAUS4
Motif
Other DBs
NCBI-GeneID:
122889707
NCBI-ProteinID:
XP_044081005
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All DBs
Position
11:154578460..154609252
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AA seq
475 aa
AA seq
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MAVAACGTKAMSLFKRTFVLSPAAAPRGTGAGAGSQPRGCPLSSAAWPSKDWPRGEGVCG
WLRTPPAACRRPQSHSCSSASPTSVCLLCPQDSLSSSLKTCYKYLNQTSRSFAAVIEALD
GEMRHAVCIFYLVLRALDTLEDDMTISIEKKVPLLHNFHSYLYEPDWRYMESKEKDRQVL
EDFPSISLEFRNLAEKYQTVIVDICQKMGFGMAEFLDKHVTSEQEWDKYCHYVAGLVGIG
LSRLFSASELEDPLVGEDRECANSMGLFLQKTNIIRDYLEDHREGREFWPQEVWGKYVKK
LGDFAKPQNIDSAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLAA
CYNNQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPSSDPSSGKTRQI
ISTIRTQNLPNCQLISRSHYSPLYLSFVMLLAALSWQYLSTLSQVTEDYVQTGEH
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggccgtggctgcctgcggcaccaaggccatgtccctgttcaagcggacctttgtgctg
agtccggccgctgcaccccggggcacaggcgcgggcgccggctcccagccgcggggctgc
cccttgtcttccgccgcctggccctccaaggactggccgcggggggagggcgtctgcgga
tggctgcgcaccccgccggcagcctgccgccggccccagtcccactcctgctcctctgca
tctcccacctcagtgtgtcttctctgtccccaggactcgctgagcagcagcttgaaaact
tgctacaagtatctcaatcagaccagtcgcagttttgcagctgtcattgaggcgctggat
ggggaaatgcgccatgcggtatgcatattttatctggtcctccgagccttggacactctg
gaagatgacatgaccatcagtatagaaaaaaaggttccactgctacacaattttcactct
tacctttatgaaccagactggcggtatatggagagcaaggagaaggatcgacaagtgcta
gaggacttcccatcgatctccctcgagtttagaaatttggctgagaaatatcaaacagtg
attgttgacatttgccagaaaatgggatttgggatggcggagtttttggataaacacgta
acctctgaacaagagtgggacaagtactgtcactatgtcgccgggctggtgggaattggc
ctttcccgtctgttctcagcctcagagttagaagaccccttagttggtgaagacagagaa
tgtgccaattctatgggcctgtttctgcagaaaacaaacatcattcgtgattatctggaa
gaccatcgagaaggaagagagttttggcctcaagaggtttggggcaagtatgttaagaag
ttgggcgattttgctaagccacagaacattgactcggctgtgcagtgcctgaacgaactt
ataaccaacgcacttcaccacatcccagatgtcatcacttatctttcaagacttagaaat
caaagtgtgtttaacttctgtgctattccacaggtgatggccattgccactctggctgcc
tgttacaacaatcagcaggtgttcaaaggcgtagtgaagatccgaaaagggcaggcagta
actctaatgatggacgccaccaatatgccagcggtcaaggctataatctaccagtacatg
gaagagatttatcatagaatccccagctcagacccatcttctggtaaaaccaggcagatc
atctctaccatcaggacccagaatcttcctaattgtcagctgatctcccgaagtcactac
tcccctctttacctgtcatttgtcatgctgttggctgccctgagctggcagtacctgagc
acgctgtcccaggtcacagaagactatgtgcagactggagaacactga
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