Neogale vison (American mink): 122890141
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Entry
122890141 CDS
T08764
Symbol
DHX15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122890141 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nvs03041
]
122890141 (DHX15)
03009 Ribosome biogenesis [BR:
nvs03009
]
122890141 (DHX15)
Enzymes [BR:
nvs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
122890141 (DHX15)
Spliceosome [BR:
nvs03041
]
Complex A
U2 snRNP components
U2 related factors
122890141 (DHX15)
Complex B
122890141 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
122890141 (DHX15)
Ribosome biogenesis [BR:
nvs03009
]
Eukaryotic type
90S particles
Helicases
122890141 (DHX15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
Atrophin-1
AAA_29
Flavi_DEAD
AAA_25
Motif
Other DBs
NCBI-GeneID:
122890141
NCBI-ProteinID:
XP_044081811
LinkDB
All DBs
Position
11:48998741..49056248
Genome browser
AA seq
795 aa
AA seq
DB search
MSKRHRLDLGEDYPSGKKRAGTDGKDRDRDRDREDRSKDRDRERDRGDREREREKEKEKE
LRASTNAMLISAGLPPLKASHSAHSTHSAHSTHSTHSAHSAHTGHAGHTSLPQCINPFTN
LPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRS
LPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGM
LLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKF
QIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQE
EIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVS
TNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGK
CFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRAL
ELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCF
VRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNV
RQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQ
LHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQL
DRIIAKLQSKEYSQY
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcggcaccggttggacttgggggaggattacccctccggcaagaagcgtgcg
gggaccgatgggaaggatcgagatcgtgaccgggatcgtgaagatcggtctaaagatcga
gaccgagaacgtgatagaggagatagagagcgggaaagggagaaagaaaaggagaaggaa
ttgcgagcttcgactaatgctatgcttatcagtgctggattaccacctttaaaagcttcc
cattcagctcactcaacccactctgcacattcaacacattcgacacattctgctcattca
gcacacaccggacatgcaggacacacatcacttccacagtgcattaatccttttaccaac
ctaccccatactcctcgttactatgatattctaaagaaacggcttcagctccctgtttgg
gaatacaaagataggtttacagatattctggttaggcatcagtcctttgtactggttggt
gagactgggtctggtaaaacaacacagattccacagtggtgtgtggagtacatgcgatca
ttaccaggacccaagagaggagttgcctgtacccaacccaggagagttgctgcaatgagt
gtggcccagagagttgctgatgaaatggatgtaatgttgggccaggaagttggttactcc
atccgatttgaagactgcagcagtgcaaaaaccattcttaagtatatgactgatggaatg
ctacttcgtgaagctatgaatgatcccctcctggagcgttatggtgtaataattcttgat
gaggctcatgaaaggactttggctacagatatcctcatgggtgttctgaaggaagttgta
agacagagatcagacttaaaggttatagttatgagcgctactctagatgcagggaaattc
cagatttactttgataactgtcctctcttaactattcctgggcgtacacatcctgttgag
atcttttatactcctgaaccagagagagattatcttgaagctgccattcgaacagtgatc
caaattcatatgtgtgaagaggaggagggagatcttctacttttcttaactggtcaagag
gaaattgatgaagcctgtaagagaataaagcgcgaggtagatgatttgggccctgaagtt
ggtgacattaaaatcattccattatactctacacttccgcctcagcagcaacaacgcatt
tttgagcctccgcctccaaaaaagcagaatggagcgattggaagaaaggtagttgtgtca
actaacattgcagagacatctttgacaatagatggtgtggtatttgtgattgatcctgga
tttgcaaaacaaaaggtatacaatcctcgaatcagggttgagtctctcttggtaacagcc
attagtaaagcttcagctcaacaaagagctggtcgagctgggcgtaccagacctgggaaa
tgcttcagactttatacagagaaggcttataaaacagaaatgcaggataacacctatcct
gagattttgcgttctaatttaggatcagttgtgttacaattgaagaagcttggtattgat
gatttggtacattttgactttatggatccaccagctcctgaaactctgatgagagcctta
gaacttttgaattacctggctgctttaaatgatgatggagatctgactgaattgggatcc
atgatggcagagtttcctctagatccacagctcgctaaaatggttattgcaagttgtgac
tacaactgttctaatgaggtcctatctattactgctatgttgtcagtcccacagtgtttt
gttcgccccacggaggccaagaaagccgcagatgaagccaagatgagatttgcccacata
gatggagatcatctgacactgctgaatgtctaccatgcttttaaacaaaatcatgaatcg
gttcagtggtgttatgacaacttcattaactacaggtccctgatgtcagcagataatgta
cgccagcagctatcacgaattatggacagatttaatttgcctcgtcgaagtactgacttt
acaagcagggactattatattaatataagaaaagctttggttactgggtattttatgcag
gtggcacatttagaacgaacagggcattacttaactgtgaaagataaccaggtggttcag
ttgcatccctctactgttcttgaccacaagcctgaatgggtgctttataatgagtttgtt
cttacaacaaagaattacatccggacgtgtacagatatcaagccagaatggttggtgaaa
attgcccctcaatattatgacatgagcaatttcccacagtgtgaagcaaagagacagttg
gaccgcatcattgccaaacttcaatccaaggaatattcacagtactga
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