Neogale vison (American mink): 122890405
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Entry
122890405 CDS
T08764
Symbol
PCDHB5
Name
(RefSeq) protocadherin beta-5
KO
K16494
protocadherin beta
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nvs04515
]
122890405 (PCDHB5)
Cell adhesion molecules [BR:
nvs04515
]
Cadherins
Protocadherins
122890405 (PCDHB5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
122890405
NCBI-ProteinID:
XP_044081950
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Position
1:complement(238330285..238333328)
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AA seq
795 aa
AA seq
DB search
MEIALAKTPQKRQVIFLAILLLFWEAGSDAVRYYMPEETESGSFVANLAKDLGLRVGELA
TRGARIHYKGNKQVLQLDIETGNLLLYEKLDREVLCGVTDPCILYFQLLLENPVQFFQAE
LQLTDINDHSPEFLDKEMLLKIPESVQPGTIFPLKIAQDLDIGINTVQNYTISPNSHFHA
VTRNRGDGRKYPELVLDKSLDREEQSELSLTLTALDGGTPPRSGTTAVRIEVVDINDNAP
QFLQSLYEVQVPENSPLNSLVVAVSAQDLDAGTYGNVVYTLFQGDEVTQPFVIDEITGEI
RLKKALDFEATQYYSVEIAGTDGGGLSGKCTVAIEVVDVNDNAPELTMSTLSSSTPENSP
ETIVAVFSVTDPDSGDNGRVVCSIQNDLPFLLKPTFKNFYTLVTERPLDRESQAEYNITI
TVTDLGTPRLKTQHNLTVTVSDVNDNAPAFSQTTYTLRVRENNSPALHIGSVSATDRDSG
ANAQVTYSLLPPHDPQLPLGSLVSINADNGQLFALRSLDFEALQAFEFRVGAADRGSPAL
SSQALVRVLVADANDNAPFVLYPLQNGSAPCTELVPRAAEAGYLVAKVVAVDGDSGQNAW
LSYQLLKATEPGLFGVWAHNGEVRTARPLSERDAVKHRLLVLVRDHGEPPLSASVTLHVL
LVDGFSQPYLPLPDAAAAEARADPLTVYLVVALASVSSLFLFSVLVFVAVRLCRRRRAAS
GGGCSVPEGPFPGHLVDFSGAGTLSHSYQYEVCLRGGSETGDFKFLKPIIPKFTSNGAGE
EIEENATFWNSFGFS
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggagattgcgctagcaaaaacgccacagaaaaggcaagttatctttcttgctatattg
ttgcttttttgggaggctggttctgatgcagttaggtattacatgccagaagaaacagaa
agtggctcctttgtggccaacttggcaaaagacctggggctcagggttggggagctagct
actcggggtgcgcgaatccattacaaaggaaacaaacaggtcttgcagctggatatagaa
accgggaatttgctgctgtatgaaaaactagaccgggaggtgctgtgtggggtgacagat
ccctgtatactctatttccagttattactggaaaacccagtgcagttttttcaggctgag
ctgcagcttacggatataaatgaccattccccagaattcctagacaaggaaatgctccta
aaaatcccagaaagtgttcaaccagggaccatatttcctttgaaaatagctcaggacttg
gacataggtatcaacactgtgcagaactacacaatcagccccaactcccattttcacgct
gtcactcgtaatcgcggagatggccgaaaatacccagagctcgtactggacaaatccctg
gatcgggaggagcagtctgagctcagtttaactctcacagcgctggatggtgggactccg
cccaggtccgggaccactgcagtccgtattgaagtcgtggacatcaatgataatgcccct
cagtttttacagtcgctctatgaggtacaggtccccgaaaacagccccctaaactccttg
gttgtcgctgtctctgcccaagatttagatgcaggaacatatgggaatgtagtctacact
ctcttccaaggcgatgaagttactcaaccatttgtaatagatgaaattacaggagaaatt
cgtttgaaaaaggcattggatttcgaggcaactcaatactattccgtggaaattgcaggc
acagatggcggggggctttcaggaaagtgtactgtagctatagaggttgtggatgtgaat
gacaatgcccctgaacttaccatgtcgacgctctcaagctctaccccagaaaactcacca
gagaccatagtggctgttttcagtgttactgatccagactcgggggacaacggtagagtg
gtttgctccatccagaacgatctcccctttctcctgaaacctacgttcaagaacttctac
acactagttacggagagaccactggacagagagagccaggccgagtacaacatcaccatc
accgtcaccgacctggggacccccaggctgaaaacccagcacaacctcacggtgaccgtg
tccgacgtcaacgacaacgccccggccttcagccagacgacctacaccctgcgcgtccgc
gagaacaacagccccgccctgcacatcggcagcgtgagcgccaccgacagagactcgggc
gccaacgcccaggtcacctactcgctgctgccgccccacgacccgcagctgccgctgggc
tcgctggtgtccatcaacgcggacaacgggcagctgttcgcgctcaggtcgctggatttc
gaggcgctgcaggcgttcgagttccgcgtgggcgcggccgaccgcggctcgccggcgctc
agcagccaggcgctggtgcgcgtgctggtggcggacgccaacgacaacgcgccgttcgtg
ctgtacccgctgcagaacggctcggcgccctgcaccgagctggtgccgcgggcggccgag
gcgggctacctggtggccaaggtggtggcggtggacggcgactcgggccagaacgcctgg
ctgtcgtaccagctgctcaaggccacggagcccgggctgttcggcgtgtgggcgcacaac
ggcgaggtgcgcacggcgcggccgctgagcgagcgcgacgcggtcaagcacaggctgctg
gtgctggtccgggaccacggcgagccgccgctgtcggccagcgtcacgctgcacgtgctg
ctggtggacggcttctcgcagccctacctgccgctgccggacgcggcggcggccgaggcc
cgcgccgacccgctcaccgtctacctggtggtggccttggcgtccgtgtcgtcgctcttc
ctgttctcggtgctggtgttcgtggcggtgcggctgtgcaggaggaggcgggcggcgtcg
gggggcggctgctcggtgcccgagggtccgtttccgggccacctggtggacttcagcggc
gcggggaccctgtcccacagctaccagtatgaggtgtgtctgagaggaggatctgagacc
ggcgacttcaagttcttgaagccaattattcccaaatttacatcgaatggcgctggggaa
gaaatagaggaaaatgccaccttctggaatagctttggattcagttag
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