Neogale vison (American mink): 122890417
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Entry
122890417 CDS
T08764
Symbol
PCDHB4
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin beta-4
KO
K16494
protocadherin beta
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nvs04515
]
122890417 (PCDHB4)
Cell adhesion molecules [BR:
nvs04515
]
Cadherins
Protocadherins
122890417 (PCDHB4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
122890417
NCBI-ProteinID:
XP_044081958
LinkDB
All DBs
Position
1:complement(238339715..238343782)
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AA seq
795 aa
AA seq
DB search
METLERIQPNRQVMAFILMVFLSQARAEPMRYSVMEETESGSFVAHLTKDLGLGIGELAA
RSARVVSDDDKQRLQLDRQTGDLLLREKLDREGLCGPVEPCVLHFQVFLETPVQFFEGEL
SIQDVNDHSPVFPTREMLLKILENSQPGTLFPLKPAQDLDVGSNGLQKYTLSPNSHFHVL
TRNHSEGKKYPDLVQDKALDREEQSEFSLTLKTLDGGSPPKSGTMTVRILIIDVNDNAPE
FVHTPYEVQVLENSPLGSPVLSVSARDIDAGNFGSVSYSLFQASDEIKQTFLINEVTGEI
RLTKKLDFEQIKSYHVEIEAIDGGGLSGKGSVVIDVVDVNDNAPELTITSFTNSVPENAP
ETVVSVFRIRDRDSGDNGKMICSIPDDLPFLLKPTFKNFYTLVTQSPLDRESQAEYNITI
TVTDLGTPRLKTQHNLTVTVSDVNDNAPTFSQTTYTLRVRENNSPALHIGSVSATDRDSG
ANAQVTYSLLPPHDPQLPLGSLVSINADNGQLFALRSLDFEALQAFEFRVGAADRGSPAL
SSQALVRVLVADANDNAPFVLYPLQNGSAPCTELVPRAAEAGYLVAKVVAVDGDSGQNAW
LSYQLLKATEPGLFGVWAHNGEVRTARPLSERDAVKHRLLVLVRDHGEPPLSASVTLHVL
LVDGFSQPYLPLPDAAAAEARADPLTVYLVVALASVSSLFLFSVLVFVAVRLCRRRRAAS
GGGCSVPEGPFPGHLVDVSGAGTLSHSYQYEVCLTGGSGTGEFKFLKPIFPNILIEDTER
EIQDNPNCRNSFVFS
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggagacgctagagagaattcaaccaaacaggcaagtgatggcctttattttgatggtg
ttcttgtctcaggctcgcgccgagcctatgcgttattctgtgatggaagaaacagagagt
ggctcctttgtagcccatctgaccaaagatctgggcctgggaattggggaactggccgcc
cggtcggcccgggtggtgtctgacgatgacaagcagcgcttgcagctggatcgtcagact
ggagatttgcttttgagggagaaactagaccgggaagggttatgtggccctgttgaaccg
tgtgtactgcatttccaagtgttcttagaaacgccggttcagttttttgaaggagagtta
tcaatccaggacgtaaatgaccactccccagtgttcccgactagggaaatgctcttgaaa
atacttgaaaacagccagccaggtactctgtttcccttgaaaccagctcaggatttggat
gtgggcagcaatggtcttcaaaaatacactctcagccccaattctcattttcatgtacta
actcgaaatcatagtgagggcaagaaatacccagatttggtgcaggacaaagcgctggat
cgagaggagcagtctgagttcagcttaaccctcaagacactggatggtgggtctccgcct
aagtctggcaccatgacagtgcgaatcctgatcatagacgtcaatgacaatgctccagag
tttgtgcacaccccatatgaggtgcaggtcttggaaaacagccccctaggctccccagta
cttagtgtctcagctagagatatagatgctggaaacttcgggagtgtttcatatagcttg
ttccaagcatcagatgaaattaaacaaactttcttaataaatgaagtcacaggagaaatc
cgattgacaaagaaactggattttgaacaaataaaatcttaccacgtggaaattgaggct
atagacggaggaggcctttctggaaaaggctctgtagtcatagacgtggtggatgtgaac
gacaacgcccctgaacttaccataacttccttcaccaactccgtcccagaaaatgcgcct
gagactgtagtctctgtcttccgaattcgggatcgagactctggagacaatgggaagatg
atctgctctattccagatgatctgccgttccttctgaaaccgactttcaagaatttctac
accctagtaacacagagtcctctcgacagagaaagtcaggccgaatacaacatcaccatt
accgtcaccgacctggggacccccaggctgaaaacccagcacaacctcacggtgaccgtg
tccgacgtcaacgacaacgccccgaccttcagccagacgacctacaccctgcgcgtccgc
gagaacaacagccccgccctgcacatcggcagcgtgagcgccaccgacagagactcgggc
gccaacgcccaggtcacctactcgctgctgccgccccacgacccgcagctgccgctgggc
tcgctggtgtccatcaacgcggacaacgggcagctgttcgcgctcaggtcgctggatttc
gaggcgctgcaggcgttcgagttccgcgtgggcgcggccgaccgcggctcgccggcgctc
agcagccaggcgctggtgcgcgtgctggtggcggacgccaacgacaacgcgccgttcgtg
ctgtacccgctgcagaacggctcggcgccctgcaccgagctggtgccgcgggcggccgag
gcgggctacctggtggccaaggtggtggcggtggacggcgactcgggccagaacgcctgg
ctgtcgtaccagctgctcaaggccacggagcccgggctgttcggcgtgtgggcgcacaac
ggcgaggtgcgcacggcgcggccgctgagcgagcgcgacgcggtcaagcacaggctgctg
gtgctggtccgggaccacggcgagccgccgctgtcggccagcgtcacgctgcacgtgctg
ctggtggacggcttctcgcagccctacctgccgctgccggacgcggcggcggccgaggcc
cgcgccgacccgctcaccgtctacctggtggtggccttggcgtccgtgtcgtcgctcttc
ctgttctcggtgctggtgttcgtggcggtgcggctgtgcaggaggaggcgggcggcgtcg
gggggcggctgctcggtgcccgagggtccgtttccgggccacctggtggacgtcagcggc
gcggggaccctgtcccacagctaccagtatgaggtgtgtctgacgggaggctctgggacc
ggtgagttcaagttcttgaagccaatatttcccaacatcttgattgaggacactgagaga
gaaattcaagacaaccccaactgcaggaatagctttgtattcagttaa
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