Neogale vison (American mink): 122890434
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Entry
122890434 CDS
T08764
Symbol
PCDHB3
Name
(RefSeq) protocadherin beta-3
KO
K16494
protocadherin beta
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nvs04515
]
122890434 (PCDHB3)
Cell adhesion molecules [BR:
nvs04515
]
Cadherins
Protocadherins
122890434 (PCDHB3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
122890434
NCBI-ProteinID:
XP_044081980
LinkDB
All DBs
Position
1:complement(238352782..238356159)
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AA seq
780 aa
AA seq
DB search
MEARGERFLRQRQVLFLFVFLGGSLTESESRRYSVVEETERGYLIANLAKDLGLGVGELA
VRGAQVVSKGNKQHFQLNHQTGDLLLHEKLDREELCGHTEPCLLHFQILLQNPLQFITNE
VQVIDVNDHSPVFFENEMQLKLLENTPPGTVIPLENAEDLDVGRNSLQNYTIAPNSHFHV
LTRNRRDGRKYPQLVLDKALDREEHPELVLTLTALDGGSPPRSGIAQIHILVLDINDNAP
EFTQSLYEVQILENSPINSVIVTVSASDLDTGNFGTVSYAFFHASEEIRKTFQLNSITGD
IQLVKYLNYEVMDTYEVDIEAKDGGGLSGKTTVIVQVVDVNDNPPELTLSSITSPIPENS
PETVVAVFSVSDPDSGDNGRIMCSIDNNLPFVLKPSVENFYTLLSKGALDRESQAEYNIT
ITVTDLGTPRLKTQHNLTVTVSDVNDNAPTFSQTTYTLRVRENNSPALHIGSVSATDRDS
GANAQVTYSLLPPHDPQLPLGSLVSINADNGQLFALRSLDFEALQAFEFRVGAADRGSPA
LSSQALVRVLVADANDNAPFVLYPLQNGSAPCTELVPRAAEAGYLVAKVVAVDGDSGQNA
WLSYQLLKATEPGLFGVWAHNGEVRTARPLSERDAVKHRLLVLVRDHGEPPLSASVTLHV
LLVDGFSQPYLPLPDAAAAEARADPLTVYLVVALASVSSLFLFSVLVFVAVRLCRRRRAA
SGGGCSVPEGPFPGHLVDVSGAGTLSHSYQYEVCLTGGTGTNEFKFLKPIFPNGLVQDTE
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggaggccagaggggagcgctttcttagacaaaggcaagtcctatttctctttgttttt
ctgggtgggtctctgactgagtctgagtcaagacgctactctgtggttgaggaaacagag
aggggctatttaatagccaacctagcaaaggatttagggctaggggtaggggaactggct
gtgaggggagcccaagttgtgtctaaagggaacaaacagcattttcagctcaaccatcag
accggcgatttgctcctgcatgagaaattggaccgggaagagctatgcggccacacggag
ccatgtttactgcactttcagatattactgcaaaaccctttgcaatttattacaaatgag
gttcaggtcatagatgtaaacgaccattctccggtattctttgaaaatgaaatgcagctg
aaactcttagaaaacacgccaccaggaaccgtaattcctttggaaaatgctgaggacttg
gatgtgggaagaaacagtctccaaaactacacaatcgctcctaattcccatttccatgtt
ctcacacgcaatcgtagggatggaagaaagtacccacaactagtgctggacaaagcgcta
gaccgtgaggagcacccagagctcgttttgaccctcaccgcgctagatgggggctctcca
ccccggtcggggatcgcccagatccacattctggtcttagacataaatgacaatgcccca
gaatttacacagtcactctatgaggttcaaattctagagaacagtcccattaactctgtt
attgtcactgtctcagcttctgacttagatacaggaaattttgggacagtatcgtatgca
ttttttcatgcttctgaagaaattcgcaaaacttttcagctaaattcaattactggtgat
atccaactagtcaaatatttgaattatgaggttatggatacttatgaagtggacatagaa
gccaaggatggggggggcctttcaggaaaaaccacagtgatagttcaggtggttgatgtg
aatgacaacccaccagaactgaccttgtcctcaattaccagccctatccctgagaactcg
ccagagactgtggtggctgttttcagtgtttcagatcctgactctggagacaatggaaga
attatgtgctccatcgataacaatctccccttcgtcctaaaaccatcagtagagaatttt
tacaccctactgtcaaaaggagcactagacagagagagccaggccgagtacaacatcacc
atcaccgtcaccgacctggggacccccaggctgaaaacccagcacaacctcacggtgacc
gtgtccgacgtcaacgacaacgccccgaccttcagccagacgacctacaccctgcgcgtc
cgcgagaacaacagccccgccctgcacatcggcagcgtgagcgccaccgacagagactcg
ggcgccaatgcccaggtcacctactcgctgctgccgccccacgacccgcagctgccgctg
ggctcgctggtgtccatcaacgcggacaacgggcagctgttcgcgctcaggtcactggat
ttcgaggcgctgcaggcgttcgagttccgcgtgggcgcggccgaccgcggctcgccggcg
ctcagcagccaggcgctggtgcgcgtgctggtggcggacgccaacgacaacgcgccgttc
gtgctgtacccgctgcagaacggctcggcgccctgcaccgagctggtgccgcgggcggcc
gaggcgggctacctggtggccaaggtggtggcggtggacggcgactcgggccagaacgcc
tggctgtcgtaccagctgctcaaggccacggagcccgggctgttcggcgtgtgggcgcac
aacggcgaggtgcgcacggcgcggccgctgagcgagcgcgacgcggtcaagcacaggctg
ctggtgctggtccgggaccacggcgagccgccgctgtcggccagcgtcacgctgcacgtg
ctgctggtggacggcttctcgcagccctacctgccgctgccggacgcggcggcggccgag
gcccgcgccgacccgctcaccgtctacctggtggtggccttggcgtccgtgtcgtcgctc
ttcctgttctcggtgctggtgttcgtggcggtgcggctgtgcaggaggaggcgggcggcg
tcggggggcggctgctcggtgcccgagggtccgtttccgggccacctggtggacgtcagc
ggcgcggggaccctgtcccacagctaccagtatgaggtgtgtctgacgggaggcacgggg
accaatgagttcaagttcctcaagcccatttttcccaatggtctggttcaagatactgag
tga
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