Neogale vison (American mink): 122891343
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Entry
122891343 CDS
T08764
Symbol
OPTN
Name
(RefSeq) optineurin isoform X1
KO
K19946
optineurin
Organism
nvs
Neogale vison (American mink)
Pathway
nvs04137
Mitophagy - animal
nvs04140
Autophagy - animal
nvs05014
Amyotrophic lateral sclerosis
nvs05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122891343 (OPTN)
04137 Mitophagy - animal
122891343 (OPTN)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
122891343 (OPTN)
05022 Pathways of neurodegeneration - multiple diseases
122891343 (OPTN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nvs04131
]
122891343 (OPTN)
Membrane trafficking [BR:
nvs04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
122891343 (OPTN)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
122891343 (OPTN)
Autophagy
Mitophagy
PINK1-Parkin associated proteins
122891343 (OPTN)
Xenophagy
Cargo receptors
122891343 (OPTN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CC2-LZ
NEMO
zf_C2H2_10
EDR4-like_1st
DUF8106
Zn_ribbon_CLPX_N
Motif
Other DBs
NCBI-GeneID:
122891343
NCBI-ProteinID:
XP_044082863
LinkDB
All DBs
Position
12:120451520..120497551
Genome browser
AA seq
586 aa
AA seq
DB search
MEARARARGPAAMSHQPLSCLTEKGDSPNETTGNGPPNLAHPNLDTFTPEELLRQMKELL
TENHQLKEAMKLNNQAMKGRFEELSAWTEKQKEERLFFEIQSKEAKERLMALSHENEKLK
EELEKLKGKMEKSLEDPTGGPKVPKAEADQELEQLKTQVAYLQAEKADLLGIVSELQLKL
NSGGSSEDSFVEIRIAEGDADVAMREIRTSPGPTRTDSIDTNKSTESARNYLEFEKLTVS
QLLLCLREENQKVEKLGIALKEAKERVSYFEKKASDHSDIETQTERSTEKEKEEEKGPET
VGSEVETLNLQVTTLFKELQEAHTKLSEAELMKKRLQEKCQSLERKNSAIPSELNEKQEL
VYNNKKLELQVESMKSEIKMEQAKTEEEKSKLATLQLTHNKLLQEYNNSLKTLEELKRKE
SEKVDKVVLQELSEKLEVAEKALASKQLQMDEMKQTIAKQEEDLETMTVLRAQMEVYCSD
FHAERAAREKIHEEKEQLALQLAVLLKEDNVFEDGSSRQSLMEMQSRHGARTSDSDQQAY
LVQRGAEDRNWRQQQQRNIPIHSCPKCGEVLPDIDTLQIHVMDCII
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggaggccagagcgcgggcgcggggtcctgcagccatgtcccaccaaccacttagctgc
ctgactgaaaagggggacagccccaacgaaaccacaggaaatgggccccccaacctggct
cacccaaacctggacacgttcaccccggaggagctgctgcggcagatgaaggagctcctg
actgagaaccatcagctcaaagaagccatgaagctaaataatcaggcgatgaaagggcga
tttgaagagctttcagcctggacagagaaacagaaggaagaacgcctcttttttgagata
cagagcaaagaagccaaagagcgcctcatggctttgagtcacgaaaatgaaaaattgaag
gaagaacttgaaaaactaaaagggaaaatggaaaagtcccttgaggaccccactgggggc
cccaaagtccccaaggcagaagcagaccaggaactcgaacagctgaagacccaggtggcc
tatctccaagctgaaaaagcagatctgctggggattgtgtcggaactacagctcaagctg
aattcggggggttcttctgaagactcctttgttgaaatcaggatagctgaaggagacgca
gatgtggcaatgagagaaatcaggacaagtcctggaccaacaagaactgattccattgac
acgaacaaatctacagaaagtgccaggaattatttggaatttgagaaattaactgtgagc
cagctcctgctttgtctaagggaggaaaaccagaaggtggagaagcttggaattgcactc
aaggaagccaaagaaagagtttcatattttgaaaagaaagccagtgatcattctgacatt
gagacccagacagagagaagcacagaaaaagagaaagaagaggagaagggccccgaaact
gttggaagtgaagtggagacattgaaccttcaggtgacgactctatttaaggagcttcaa
gaggctcatacgaaactcagtgaggctgagctaatgaagaagagacttcaagagaaatgt
cagtcccttgaaaggaaaaattctgcaattccttcagagctgaatgaaaagcaagagctt
gtttataacaacaaaaagttggagctacaagtggaaagcatgaaatcagaaatcaaaatg
gagcaagctaaaaccgaagaggaaaagtccaagttagccactcttcagttgacccacaac
aagcttcttcaagaatacaataattcattgaaaacactggaggaactgaaaaggaaagag
tctgaaaaagtggataaggtggtacttcaagaactaagtgaaaagctggaagtggcagag
aaggccttggcttccaagcagcttcagatggacgagatgaagcagaccatcgccaagcag
gaagaggacctggaaaccatgaccgttcttcgggctcagatggaggtttactgttcggac
ttccatgccgaaagagcagcgagagagaagatacatgaagagaaggagcagctggcccta
cagctggcagtcctgctgaaagaggataatgtttttgaagacggaagcagcaggcagtcc
ctgatggagatgcagagccgtcatggggcgagaaccagtgactccgaccagcaggcctac
ctcgttcagagaggagctgaggacagaaactggcggcagcagcagcagcggaatattcca
attcattcctgccccaaatgtggagaagttctgcccgacatagacacgctccagatccat
gttatggactgcatcatttaa
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