Neogale vison (American mink): 122891390
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Entry
122891390 CDS
T08764
Symbol
SMC1B
Name
(RefSeq) structural maintenance of chromosomes protein 1B isoform X1
KO
K06636
structural maintenance of chromosome 1
Organism
nvs
Neogale vison (American mink)
Pathway
nvs04110
Cell cycle
nvs04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
122891390 (SMC1B)
04114 Oocyte meiosis
122891390 (SMC1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nvs03036
]
122891390 (SMC1B)
Chromosome and associated proteins [BR:
nvs03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
122891390 (SMC1B)
Meiosis-specific proteins
Cohesin complex and associated proteins
122891390 (SMC1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_15
AAA_21
AAA_29
Ca_chan_IQ
Motif
Other DBs
NCBI-GeneID:
122891390
NCBI-ProteinID:
XP_044082940
UniProt:
A0A8C7C680
LinkDB
All DBs
Position
12:4078770..4153514
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AA seq
1235 aa
AA seq
DB search
MGHLEVLLVENFKSWRGRQVIGPFRRFTCIIGPNGSGKSNVMDALSFVMGEKTANLRVKN
IQELIHGAHIGRPVSSSASVKIVYVEESGEEKTFTRIIRGGCSEFHFDDNPVSRSVYVAE
LEKIGIIVKARNCLVFQGTVESISMKKPKERTQFFEEISTSGELIGEYEEKKRKLQKAEE
DAQFNFNKKKNVAAERKHAKLEKEEAERYQSLLEELKMNKIQLQLFQLYHNEKKIHFLNT
ELEHVSRDLSVTKESLSHHENIVKAKKKEHGMLTRQLQQTEKELKSLEALLNQKRPQYIK
AKENTSHHLKKLDVAKKSIKDSEKQCSKQEDDIKALETELIDLDGAWRSFEKQVEEEILQ
KGRDIELEASQLDRYRELKEQVRKKVAIMTQQLEKLQWEQKADRERLVFEKRRHGEVQEN
LKQIKEQIEDHKKRIEKLEEYTKTCMDCLKEKKQQEEMLVGEIENTKSRMSEVNEELNLI
RNELQNAGIDNHEGNRQQKRAEVLEHLKRLYPDSVFGRLLDLCHPIHKKYQLAVTKLFGR
YMVAIVVASEKVAKDCIRFLKEERAEPETFLALDYLDIKPINERLREIKGCKMVIDVIKT
QFPQLKKVIQFVCGNGLVCETVEEARHIAFGGPERRKTVALDGTLFLKSGVISGGSSDLR
YKARCWDEKEIKTLRDRRSRLIQELKDLMKILRKEADLKQIQTLVQGTHTRLKYSQSELE
MIKKKHLAAFFREQSQLQSELLNIESQCAMLSESIKERQQRIEEFQEKIDKVEDEIFKHF
CEEIGVENIREFEKKQVKQQQEIDQKRLEFEKQKTRLNVQLEYSRNQLKKRLSKINKLKE
TVQKGREDIDNLKQAEENCLQIVDDLMAKRQQLKDVFLTQNASAEKVQAQLEEERKRFLA
IDREVGKWQKEVVIIQTSLEQKRLEKHNLLLDCKVQDIELILLLGSLDDIIEVELGTEAE
STQATVDIYEKEEALEIDYSSLTDDLKALQTDKEVEARLRLLLQQVASQEDILLKTAAPN
LRALENLKTVRDKFQESTDAFEASRKEARMCRQEFEQVKKRRYDLFSQCFEHVSISIDQI
YKKLCRNVSAQAFLSPENPEEPYLEGISYNCVAPGKRFMPMDNLSGGEKCVAALALLFAV
HSFRPAPFFVLDEVDAALDNTNIGKVSSYIKEQSQEQFQMIIISLKEEFYSRADALIGVY
PEHDDCMFSRVLTLDLSQYPDTEGRESSKRNRELL
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgggtcacctggaggtgctgctcgtggagaactttaagtcgtggcggggccgccaggtc
atcggccctttcaggaggttcacctgcatcatcggccccaacggctccggaaaatctaat
gtaatggatgcacttagttttgtaatgggagagaaaacagctaatttaagagtgaaaaat
attcaagaactcattcacggggcacatattggaagacctgtctcctcttctgcaagtgtg
aaaattgtatatgtggaggaaagtggagaagagaaaacatttacaaggattatccgaggg
ggatgctcagaatttcattttgatgataatccagtgagtcgttctgtgtacgtagctgag
ttggaaaagataggcataattgtcaaagcacggaactgtctagtgtttcagggaactgtg
gagtcgatttccatgaaaaaacccaaagaaagaacccagttttttgaggagatcagcaca
tcaggagagcttattggagaatatgaggaaaagaaaagaaagttacagaaagctgaagag
gatgcacagtttaattttaataagaaaaaaaatgtagccgcagaacgcaaacatgcaaag
ttagagaaagaagaggcagaacgttatcagagtctccttgaagaactgaaaatgaacaag
atacaattacagcttttccaactatatcataatgagaagaaaattcatttcctgaacact
gagttagagcacgtgagtagggacttaagtgtcacaaaggagtctctttcccatcatgaa
aacatagtgaaagccaagaagaaggaacacggaatgttaaccagacaactacaacaaaca
gaaaaagaattaaaatctcttgaagcgcttttaaatcagaaaaggcctcaatacattaaa
gccaaagaaaacacttctcaccacctcaagaaattagacgtggctaagaaatcaataaag
gacagtgagaaacagtgttctaaacaggaagatgacataaaagccctggagacagagctg
attgatttagatggtgcatggaggagttttgaaaagcaggttgaggaagaaatcttacaa
aaggggcgagacattgaactagaagccagtcagctggatcgttacagagaactgaaggaa
caagtaagaaagaaggtggcgataatgacccaacagctggaaaagctgcagtgggaacag
aaggctgacagagaaagactggtgtttgagaagaggaggcatggagaagttcaggaaaat
ctaaaacaaataaaagaacagatagaagaccataaaaaaagaatagaaaagttggaggag
tatacaaaaacatgcatggattgcttgaaagagaaaaaacagcaagaggaaatgctagtg
ggtgaaattgaaaacacaaaatcaagaatgtctgaagttaatgaggaactgaatcttatt
agaaatgaactgcagaatgctgggattgacaaccatgaggggaaccggcagcaaaagaga
gcggaggttctggagcaccttaaaagactttacccagattctgtgtttggaagactcctt
gacctctgtcatcctattcataagaaataccagttggctgttactaaactttttggccgg
tacatggttgctattgttgtagcctctgaaaaggtagcaaaagattgtattcggtttctg
aaggaagaaagagctgaaccggagacattccttgctctggattaccttgatatcaagcca
atcaatgaaagattaagggagataaaaggctgtaaaatggtgattgatgtcataaagact
cagtttcctcagctgaagaaagtaattcagtttgtgtgtggaaatggccttgtctgtgag
actgtggaagaagcaaggcacatcgcattcggtggacctgagagacggaaaacagtagct
cttgatggaacattatttttaaaatctggggtgatctctggagggtccagtgatttaaga
tacaaggctagatgctgggacgagaaggagataaagaccttaagagacagaagatcgcgg
ctgatccaggaattaaaggatttaatgaagatacttcgcaaggaagcagatttgaaacaa
atacagactctagtacaaggaactcatacacgactcaaatactcccaaagtgaactagag
atgattaaaaagaagcaccttgctgcttttttccgggaacagtctcagctacaaagtgaa
ctactgaatattgagtctcagtgtgccatgctgagtgaaagcatcaaagagcgccaacaa
agaattgaagaatttcaagaaaagatagataaggtggaagatgagattttcaaacacttc
tgtgaagaaattggcgtggaaaatattcgtgaatttgagaagaaacaggttaaacagcaa
caagaaattgatcagaaaagattagaatttgaaaaacagaaaactcggcttaatgttcaa
ctcgaatacagtcgcaatcagctgaagaagagactgagtaagatcaacaaattaaaagag
accgtccagaaaggcagagaagacatcgataacctaaagcaggctgaagaaaattgtctg
cagattgtggatgatctcatggcaaagcggcagcaacttaaggacgtatttctcactcag
aatgcgagcgccgagaaggtccaagctcagctggaagaagagcggaagagatttctggct
attgatagggaagtgggaaaatggcaaaaagaagttgtaatcattcaaacttctttggaa
cagaaacggctggagaagcataatctgctgcttgattgcaaagttcaagacatcgaactc
atcctcttgttggggtcactggacgacatcattgaagtggagttgggaactgaagcagaa
agtacccaggcaacggtcgacatctatgagaaagaagaagccctcgagatagactacagc
tctctgacggatgatctgaaggccttacaaactgataaggaagtggaggcccgcctgagg
ctcctgctacagcaggtggcgtcccaggaggacatcctgctgaagacggcggccccaaac
ctgcgagccctggagaacctgaagactgtccgagacaagtttcaggagtccacagacgct
tttgaggccagcagaaaggaagccagaatgtgtaggcaagagtttgaacaggtgaaaaaa
aggagatatgaccttttcagccagtgttttgagcacgtctcgatctcaatcgatcaaatc
tacaagaagctctgcagaaacgtcagtgcccaagcatttcttagcccagagaacccagaa
gagccttacctagagggaattagctataactgcgtggcaccaggcaaacggttcatgccg
atggacaatctgtcagggggagaaaagtgcgtggccgcattagccctcctgttcgccgtg
cacagttttcggccggctccattctttgtgttagacgaagtagacgcggctctggacaac
acaaacattggcaaggtctcaagttacatcaaagagcagagtcaagaacagtttcagatg
atcatcatttccctgaaggaggagttctactcccgagccgacgcgctcatcggcgtctat
ccagagcacgatgactgcatgttcagcagagttttgaccctggatctttctcagtatcca
gacaccgaaggccgggaaagcagcaaaagaaaccgagagttgctttag
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