Neogale vison (American mink): 122893054
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Entry
122893054 CDS
T08764
Symbol
ATL1
Name
(RefSeq) atlastin-1 isoform X1
KO
K17339
atlastin [EC:3.6.5.-]
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nvs04131
]
122893054 (ATL1)
Membrane trafficking [BR:
nvs04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
122893054 (ATL1)
Autophagy
ER-phagy
ER-phagy recepters
122893054 (ATL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
122893054
NCBI-ProteinID:
XP_044085772
LinkDB
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Position
13:complement(48482553..48564745)
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AA seq
558 aa
AA seq
DB search
MAKNRRDRNSWGGFSEKTYEWSSEEEEPVKKAGPVQVLIVKDDHSFELDETALNRILLSE
AVRDKEVVAVSVAGAFRKGKSFLMDFMLRYMYNQESVDWVGDYNEPLTGFSWRGGSERET
TGIQIWSEIFLINKPDGKKVAVLLMDTQGTFDSQSTLRDSATVFALSTMISSIQVYNLSQ
NVQEDDLQHLQLFTEYGRLAMEEIFLKPFQSLIFLVRDWSFPYEFSYGAEGGSKFLEKRL
KVSGNQHEELQNVRKHIHSCFTKISCFLLPHPGLKVATNPNFDGKLKEIDDEFIKNLKIL
IPWLLSPESLDIKEINGNKITCRGLVEYFKAYIKIYQGEELPHPKSMLQATAEANNLAAV
ATAKDTYNKKMEEICGGDKPFLAPNDLQAKHLELKEESVKLFRGVKKMGGEEFSRRYLQQ
LESEIDELYIQYIKHNDSKNIFHAARTPATLFVVIFITYVIAGVTGFIGLDIIASLCNMI
MGLTLITLCTWAYIRYSGEYRELGAVIDQVAAALWDQGSTNEALYKLYSAAATHRHLYHQ
AFPAPKSESTEQSEKKKM
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaaccgtagggacagaaacagttggggtgggttttcagaaaagacatatgaa
tggagctcagaggaggaggagccggtgaagaaggcaggaccagtgcaagtccttatcgtc
aaagatgaccattcctttgagttagatgaaactgccctaaatcggatccttctctcggag
gctgtcagggacaaggaggttgttgctgtatctgttgctggagcatttagaaaaggaaaa
tcattcctgatggacttcatgttgagatacatgtacaaccaggaatcagtcgactgggtt
ggagattacaatgaaccactaactggtttttcatggagaggtgggtctgaacgggagacc
acaggaatccaaatatggagtgaaatcttccttatcaataaacctgatggcaagaaggtc
gcagtgctattgatggatactcagggaacttttgatagtcagtcaactctgagagattca
gccacagtatttgcacttagcacaatgatcagctcgatacaggtatataacttatcccag
aatgtccaggaggatgatcttcagcacctccagcttttcactgagtatggcagactggca
atggaagaaatattcctgaaaccatttcagagtctgatatttcttgttcgggactggagt
tttccatatgaattttcatatggagctgaaggtggctccaaattcttggaaaaacgcctc
aaggtctcagggaaccagcatgaagaactacagaatgttcgaaaacacatccattcctgt
ttcaccaaaatttcctgttttctgctacctcatcctggcttaaaagtagctaccaatcca
aactttgatggaaaactgaaagaaatagatgatgaattcatcaaaaacttgaaaatactc
attccttggctacttagtcctgagagcctagatattaaagagatcaatgggaacaaaatc
acctgccgaggtctggtggagtacttcaaggcctatataaagatctatcaaggtgaagaa
ttgccacatcccaaatccatgttacaggccacagcagaagctaacaatttagccgccgtg
gcaactgccaaggatacatacaacaaaaagatggaagagatctgtggtggtgacaaacca
tttctggcacctaatgacctacaggccaaacatttggagcttaaggaagaatctgtgaag
ctatttcgaggggtgaagaagatgggtggggaggaatttagccggcgttaccttcaacag
ttggagagtgaaatagatgaactttacatccagtatatcaagcacaatgatagcaaaaat
atcttccatgcagctcgtaccccagccacactgtttgttgtcatctttatcacgtatgtg
attgctggtgtaactggattcattggtttggacataatagctagcctatgcaatatgata
atgggactgactctgatcaccttgtgcacctgggcatacatccgctactccggagaatac
cgagagctgggggctgtaatagaccaggtggctgcagccttgtgggaccagggaagtaca
aatgaggctttatacaagctttacagtgcagcagcaacccacagacatctgtatcatcaa
gcttttcctgcgccgaagtcagaatctactgagcaatcagaaaagaagaaaatgtaa
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