KEGG   Neogale vison (American mink): 122893126
Entry
122893126         CDS       T08764                                 
Symbol
TDP1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1 isoform X1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
nvs  Neogale vison (American mink)
Pathway
nvs03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:nvs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    122893126 (TDP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nvs03400]
    122893126 (TDP1)
DNA repair and recombination proteins [BR:nvs03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     122893126 (TDP1)
SSDB
Motif
Pfam: Tyr-DNA_phospho RMMBL
Other DBs
NCBI-GeneID: 122893126
NCBI-ProteinID: XP_044085894
LinkDB
Position
13:28735714..28820872
AA seq 607 aa
MSQEGDYGKWTISSSDESEEEKPKLDKPSTSSLPRARQGAASEPRYTCSEARKVAHKRKL
SPVKFSNSDSQVSPPKRQKSGSQEDLGWCLSSSDDEVQPGTQQKQAKNMVVKEESGISSP
QDGAAQRTANPSPPALHGLKEEEEDYETSGEGQDIWDMLEKGNPFRFYLTRVSGIKPKYN
SGALHIKDILSPLFGTLVSSAQFNYCFDVDWLIKQYPPEFRKKPILLVHGDKREAKAHLH
AQAKPYENISLCQAKLDIAFGTHHTKMMLLLYEEGLRVVIHTSNLIHADWHQKTQGIWLS
PLYPQIIHGTHRSGESTTHFKADLISYLTAYNAPSLKEWIDTIHKHDLSETNVYLIGSTP
GRFQGSQKDNWGHFRLRKLLKEHASPKGESWPIVGQFSSIGSMGADDSKWLCSEFKESLV
TLGKESRTPGRSAVHLHLIYPSVENVRTSLEGYPAGGSLPYSIQTAEKQNWLHSYFHKWS
ADTSGRSNAMPHIKTYMRPSPDFSQIAWFLVTSANLSKAAWGALEKNGTQLMIRSYELGV
LFLPSAFGLDSFKVKEKFFSGSKEPVAAFPVPFDLPPELYGSKDRPWIWNIPYTKAPDTH
GNMWVPS
NT seq 1824 nt   +upstreamnt  +downstreamnt
atgtctcaggaaggtgattatgggaagtggacgatatccagtagtgatgaaagtgaggag
gaaaagccaaaactagacaagccatctacttcttccctcccccgtgctaggcagggagcg
gcaagtgaaccaagatacacctgttctgaggctaggaaagtggcccataaaaggaaatta
tcacctgtgaagttcagcaactcagattcacaagtttcacctcccaaaaggcagaagagt
ggttcccaggaagacctaggctggtgtctctctagcagcgacgatgaggtgcagccagga
acacagcagaagcaggctaagaacatggtggtaaaagaggagagcggcatctcttctccc
caagacggtgctgcccaaagaactgcaaatcccagccctcctgccctccatggactaaaa
gaggaggaagaggactatgaaacctcaggggaaggccaggacatttgggacatgttggaa
aaagggaaccccttccgattttacctcactagagtctcgggaattaagccaaagtataac
tccggagccctccacatcaaggatattctgtcgcccctatttgggacacttgtatcttca
gctcagtttaactactgctttgacgtggactggcttataaaacagtatccaccagagttc
aggaagaaaccgatcctgcttgtgcatggagataaacgagaagccaaggctcacttacat
gcccaggccaagccgtatgaaaacatttccctctgccaggcaaagttggatattgcattt
ggaacacaccacacgaaaatgatgttactgctgtatgaagaaggcctccgggttgtcata
cacacctccaacctcatccatgctgactggcaccagaaaactcagggaatatggttgagc
cccttatacccacaaattatccatggaacccacagatctggagaatcaacaacacatttt
aaagccgatctcatcagctacttgacggcttataatgctccttcactcaaggagtggata
gataccatccacaaacatgatctgtctgaaaccaatgtttatcttattggatcaacccca
ggacgctttcaaggaagtcaaaaagataattggggacattttagacttagaaagctactg
aaagagcatgcctctcctaaaggggagtcctggcccatagtagggcagttctcaagcatt
gggtctatgggagctgatgactcaaaatggttgtgttctgagtttaaagaaagcttggtg
acgctggggaaggaaagtcggaccccaggaagaagtgccgtccatcttcatctgatctat
ccttctgtggaaaatgtgcgaaccagcttagaaggatatccagctgggggctctcttccc
tatagcatccagacagctgaaaaacagaattggctccattcctattttcacaaatggtcg
gctgacacatctggccgcagcaatgctatgccacatattaaaacatatatgagaccctct
ccagacttcagtcaaattgcttggttccttgtcacaagcgcgaatttgtccaaggccgcc
tggggagcattagagaagaacggcacccagctgatgatccgttcctatgagcttggggtc
cttttcctgccatcagcatttggcctggacagcttcaaagtaaaagagaaattcttctca
gggagcaaggagccagtggccgcctttcctgtgccatttgacctgcctccagaactgtat
ggaagtaaagatcggccatggatttggaacattccttataccaaagcaccagatacacat
gggaatatgtgggttccctcctga

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