Neogale vison (American mink): 122893302
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Entry
122893302 CDS
T08764
Symbol
LRFN5
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X1
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
nvs04990
]
122893302 (LRFN5)
Domain-containing proteins not elsewhere classified [BR:
nvs04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
122893302 (LRFN5)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_5
LRR_1
ig
LRR_9
Ig_2
fn3
Ig_DSCAM-DSCAML_C
C2-set_3
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
122893302
NCBI-ProteinID:
XP_044086159
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Position
13:complement(56550342..56795094)
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AA seq
720 aa
AA seq
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MEKFLFYLFFIGIAVRAQICPKRCVCQILSPNLATLCAKKGLLFVPPNIDRRTVELRLAD
NFVTNIKRKDFANMTSLVDLTLSRNTISFITPHAFADLRNLRALHLNSNRLTKITNDMFS
GLSNLHHLILNNNQLTLISSTAFDDVFALEELDLSYNNLETIPWDAVEKMVSLHTLSLDH
NMIDNIPKGTFSHLHKMTRLDVTSNKLQKLPPDPLFQRAQVLATSGIISPSTFALSFGGN
PLHCNCELLWLRRLSREDDLETCASPALLTGRYFWSIPEEEFLCEPPLITRHTHEMRVLE
GQRATLRCKARGDPEPAIHWISPEGKLISNATRSLVYDNGTLDILITTVKDTGAFTCIAS
NPAGEATQTVDLHIIKLPHLLNSTNHIHEPDPGSSDISTSTKSGSNASSSNGDTKMSQDK
IVVAEATSSTALLKFNFQRNIPGIRMFQIQYNGTYDDTLVYRMIPPTSKTFLVNNLAAGT
MYDLCVLAIYDDGITSLTATRVVGCIQFTTEQDYVRCHFMQSQFLGGTMIIIIGGIIVAS
VLVFIIILMIRYKVCNNNGQHKVTKVSNVYSQTNGAQIQGCSVTLPQSMSKQAVGHEENA
QCCKVASDNVIQSSETCSSQDSSTTTSALPPTWTSSASVSQKQKRKTGTKPSAEPQNEAV
TNVESQNTNRNNSTALQLASRPPDSVTEGPSSKRAHSKPNALLTNVDQIVQETQNIPGKE
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaatttcttttttatctgtttttcattggcatagcagtgagagctcagatctgt
ccaaagcgttgtgtctgtcagattttgtctcctaatctcgcaaccctttgtgccaagaaa
gggcttttatttgttccaccaaacattgacagaagaactgtggaactgcggttggcagac
aattttgttacaaatattaaaaggaaagattttgccaatatgaccagcttggtggacctg
actctatccaggaatacaataagttttattacacctcatgcttttgccgacttacgaaat
ttgagggcattgcatttgaatagcaacagattgactaaaattacaaatgatatgttcagt
gggctttccaatctccatcatttgatactgaacaacaatcaactgactttaatttcttct
acagcatttgacgatgtctttgcccttgaggagctggatctgtcctacaataatttagaa
acaattccttgggatgctgttgagaagatggttagcctgcacacccttagtttggatcac
aatatgattgataacattcctaaggggactttctcccacttgcacaagatgactcggcta
gatgtaacatcaaataaattgcagaagctaccacctgaccctctctttcagcgagctcag
gtactagcaacctcaggaataatcagcccatcaacttttgcattaagttttggtggaaac
cctttgcattgcaattgtgaattgttgtggttgcggcgtctgtccagagaagatgactta
gagacttgtgcttctccagcacttttaactggtcgctatttttggtcaattcccgaggaa
gagtttttatgtgagcctcctctcattactcgtcatacacatgagatgagagtcctggaa
ggtcaaagggcaaccttgaggtgcaaagccaggggggaccctgaacctgcaattcactgg
atttctcctgaagggaagctgatttcaaatgcaacaagatctctggtgtatgataatgga
acacttgatattcttataacaactgtaaaggatacaggtgcttttacctgcattgcttct
aatcctgctggggaagcaacacaaacagtggaccttcatataattaagctccctcactta
ctaaacagtacaaatcatatccatgagcctgatccgggttcttcagatatctcaacttct
actaagtcaggttctaatgcaagcagtagtaatggtgatactaaaatgagtcaagataaa
attgtagtagcagaagcgacatcatctaccgcactacttaaatttaattttcaaaggaat
attcccggaatacgtatgttccaaatccagtacaatggtacttatgatgacacccttgtt
tacagaatgatacctcctacaagcaaaacttttcttgtcaataacctggctgctggaact
atgtatgacttgtgtgtcttggcaatatatgatgatggcatcacttccctcactgccaca
agagtcgtgggttgcatccagtttacgacggaacaggattacgtgcgatgccatttcatg
cagtcccagtttttgggaggcaccatgattattattattggtggaataattgtagcatcc
gtgctggttttcatcatcatcctcatgatccggtataaggtttgtaacaataacgggcaa
cacaaggtcaccaaggtcagcaatgtctactctcaaactaatggggctcagatacaaggc
tgcagtgtcacgctgccccagtccatgtccaaacaagctgtgggacatgaagagaatgcc
cagtgttgtaaagttgccagtgacaatgtgatacagtcttcagaaacttgttcaagtcag
gactcctctaccactacctctgctttgcctcctacctggacttcaagcgcttctgtgtcc
caaaagcagaaaagaaagactggcacaaagccaagtgccgaaccacagaatgaagctgtc
acaaatgttgagtcccaaaacactaacaggaacaactcaactgcattgcagttagctagt
cgacctcctgattctgtcacagaggggccctcatctaaaagagcacattcaaagccaaat
gctttgctgactaatgttgaccagattgtccaggaaacacagaacattccaggtaaagaa
tga
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