Neogale vison (American mink): 122893350
Help
Entry
122893350 CDS
T08764
Symbol
APEX1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122893350 (APEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nvs03400
]
122893350 (APEX1)
Enzymes [BR:
nvs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
122893350 (APEX1)
DNA repair and recombination proteins [BR:
nvs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
122893350 (APEX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
122893350
NCBI-ProteinID:
XP_044086236
LinkDB
All DBs
Position
13:96268486..96271470
Genome browser
AA seq
317 aa
AA seq
DB search
MPKRGKKGAVVEDGEEPKIEPEAKKSKAGAKKNEKEAGEGPVLYEDPPDQKTSPNGKSAT
LKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPVELQELPGLSHQYWSA
PSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEFDAFVLVTAYVPNAGRGLVR
LEYRQRWDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFG
ELLQAVPLADSFRHLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIR
SKALGSDHCPITLYLAL
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagcgtgggaaaaagggagccgtggtagaagacggggaagaacccaagattgag
ccagaagccaagaaaagtaaggcgggagcaaagaaaaacgaaaaagaggcaggagagggg
ccagtcttgtatgaggaccccccagatcagaaaacctcgcccaatggtaaatcggccacc
ctcaagatctgctcctggaatgtggatgggcttcgagcctggattaagaagaaaggttta
gattgggtaaaggaagaagccccagatatcctctgcctccaagagaccaaatgttcagag
aacaaactaccagttgaacttcaagagttacctggactatcccatcagtactggtcagct
ccttcagacaaggaggggtacagtggtgtgggcctgctttcccgccagtgccccctgaaa
gtctcctatggcattggtgaagaggaacatgatcaggaaggccgagtgatcgtggctgaa
tttgatgcatttgtgctggtaacagcctatgtacctaatgcaggccgaggtctggtacgc
ttggagtaccggcagcgctgggatgaagcctttcgcaaattcctgaagggtttggcttcc
cgcaagccccttgtgctatgtggggacctcaatgtggctcatgaagaaatcgaccttcgc
aaccccaagggaaacaaaaagaatgctggcttcactccacaagagcgtcaaggctttggg
gaattactacaggccgtgccactggctgacagtttccggcacctctaccccaacacagcc
tatgcctataccttttggacctatatgatgaatgctcgatccaaaaatgtcggttggcgc
cttgattactttttgttgtctcactctctgttacctgcattgtgtgacagcaagatccgt
tccaaggccctgggtagtgaccactgtcctatcaccctatacttagcactgtga
DBGET
integrated database retrieval system
