Neogale vison (American mink): 122893645
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Entry
122893645 CDS
T08764
Symbol
ACTN1
Name
(RefSeq) alpha-actinin-1 isoform X1
KO
K05699
actinin alpha 1/4
Organism
nvs
Neogale vison (American mink)
Pathway
nvs04510
Focal adhesion
nvs04520
Adherens junction
nvs04530
Tight junction
nvs04670
Leukocyte transendothelial migration
nvs04810
Regulation of actin cytoskeleton
nvs05146
Amoebiasis
nvs05203
Viral carcinogenesis
nvs05322
Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122893645 (ACTN1)
04520 Adherens junction
122893645 (ACTN1)
04530 Tight junction
122893645 (ACTN1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
122893645 (ACTN1)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
122893645 (ACTN1)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
122893645 (ACTN1)
09174 Infectious disease: parasitic
05146 Amoebiasis
122893645 (ACTN1)
09163 Immune disease
05322 Systemic lupus erythematosus
122893645 (ACTN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nvs04131
]
122893645 (ACTN1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nvs04812
]
122893645 (ACTN1)
04147 Exosome [BR:
nvs04147
]
122893645 (ACTN1)
Membrane trafficking [BR:
nvs04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
122893645 (ACTN1)
Cytoskeleton proteins [BR:
nvs04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
122893645 (ACTN1)
Exosome [BR:
nvs04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122893645 (ACTN1)
Exosomal proteins of colorectal cancer cells
122893645 (ACTN1)
Exosomal proteins of bladder cancer cells
122893645 (ACTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
EF-hand_5
XisI
U3_assoc_6
Uds1
Motif
Other DBs
NCBI-GeneID:
122893645
NCBI-ProteinID:
XP_044086734
UniProt:
A0A8C7AUK9
LinkDB
All DBs
Position
13:32380533..32477499
Genome browser
AA seq
892 aa
AA seq
DB search
MDHYDSQQTNDYMQPEEDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDFR
DGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGNV
KMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFC
ALIHRHRPELIDYGKLRKDDPLTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMT
YVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENR
APENTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGRM
VSDINNAWGCLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHEAWTDGKEAMLRQK
DYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKIC
DQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHT
IEEIQGLTTAHEQFKATLPDADKERLAILGIHNEVSKIVQTYHVNMAGTNPYTTITPQEI
NGKWDHVRQLVPRRDQALTEEHARQQHNERLRKQFAAQANVIGPWIQTKMEEIGRISIEM
HGTLEDQLSHLRQYEKSIVNYKPKIDQLEGDHQLIQEALIFDNKHTNYTMEHIRVGWEQL
LTTIARTINEVENQILTRDAKGISQEQMNEFRASFNHFDRDHSGTLGPEEFKACLISLGY
DIGNDPQGEAEFARIMSIVDPNRLGVVTFQAFIDFMSRETADTDTADQVMASFKILAGDK
NYITVDELRRELPPDQAEYCIARMAPYTGPDAVPGALDYMSFSTALYGESDL
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atggaccattatgattcccagcaaaccaacgactacatgcagcccgaagaggactgggat
cgggacctgctcctggacccggcctgggagaagcagcagagaaagacgttcacggcatgg
tgcaactcccacctccgcaaggctgggacgcagatcgagaacatcgaggaggacttccgg
gacggactgaagctcatgctgctgctggaggtcatctcaggggagcgcttggccaagccg
gagagaggcaagatgagagtgcacaagatctccaacgtcaacaaggccctggatttcata
gccagcaagggggtcaagctcgtgtccattggagccgaagaaatcgtggatgggaacgtg
aaaatgactttgggcatgatctggaccattatcctccgctttgccatccaggacatctct
gtggaagagacttctgcaaaagaagggctgctcttgtggtgtcagagaaagacagccccc
tacaagaacgtcaacatccagaacttccacataagctggaaggatggccttggcttctgt
gccttgatccaccgacaccgacctgagctgattgactacgggaagctgcggaaggatgac
ccactcacaaatctgaacacagcctttgatgtggcagagaagtacctggacatccccaag
atgttggatgctgaagacatcgtcggaaccgcccgcccagatgagaaagccatcatgact
tatgtgtccagcttctatcatgccttctctggagcccagaaggcggagacagcagccaat
cgaatctgcaaggtgttggccgtcaaccaggagaatgagcagctcatggaagactatgag
aagttggccagcgatctgctggagtggatccgccgcacgatcccctggctggagaaccgg
gcgccggagaacaccatgcaggccatgcagcaaaagctggaggacttccgggactaccgg
cgcctgcacaagccgcccaaagtacaggagaagtgccagctggagatcaacttcaacacg
ctgcagaccaagctgcgcctcagcaaccggcccgccttcatgccctccgagggcaggatg
gtctcggacatcaacaatgcctggggctgcctagagcaggcagagaagggctacgaggag
tggctgctgaatgagatccggaggctggagcggctcgaccacctggcagagaagttccgg
cagaaggcctccatccacgaggcctggacggacggcaaagaggctatgctacggcagaag
gattacgagaccgccaccctctcggagatcaaggccctgctcaagaagcatgaggcgttt
gagagtgatctggccgcgcaccaggaccgcgtggagcagatcgccgccattgcgcaggag
ctcaacgagctggactattatgactcgcccagtgtcaatgcccggtgccagaagatctgt
gaccagtgggacaacttgggagccctaacccagaagcggagggaagctctggagcggaca
gagaagctgctggaaaccattgaccaactgtacttggagtacgccaagcgggctgcaccc
ttcaacaactggatggagggggccatggaggatctgcaggacaccttcatcgtgcacacc
atcgaggaaatccagggactgaccacagcccatgagcagttcaaggccaccctccctgat
gccgacaaggagcgcctggccatcctgggtatccacaacgaggtgtccaagatcgtccag
acctaccacgtcaacatggcgggcaccaacccctacacaaccatcactcctcaggagatc
aatggcaaatgggaccacgtgcggcagttggtgccacggagggaccaggccctgacggag
gagcacgcccgccagcagcacaatgagaggctacgtaagcagttcgcagcccaggccaat
gtcatcgggccctggattcagaccaagatggaggagatcgggcggatctccattgagatg
cacgggactctggaggaccagctcagccacctgcgacagtatgagaagagcattgtcaac
tacaagcccaagatcgaccagctggagggcgaccaccagctcatccaggaggcgctcatc
ttcgacaacaagcacaccaactacactatggagcacatccgtgtgggctgggagcagctc
cttaccaccatcgccaggaccatcaacgaggtggagaatcagatcctcacccgagatgcc
aagggcatcagccaggagcagatgaatgagttccgggcctccttcaaccactttgaccgg
gatcactccggcacgctgggtcccgaggagttcaaagcctgcctcatcagcttgggttat
gatattggcaacgacccccagggagaggcagaatttgcccgtatcatgagcatcgtggat
cccaaccgcctgggtgtagtgacgttccaggccttcattgactttatgtctcgggagacg
gccgacacagacacagcagaccaggtcatggcctccttcaagatcctggctggggacaag
aactacatcacggtggacgagctgcgccgagagctgccgcccgaccaggccgagtactgc
atcgcgcggatggccccctacaccggccccgacgccgtgccaggtgctttggactacatg
tccttctccacggcgctgtacggcgagagcgacctctaa
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