Neogale vison (American mink): 122894057
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Entry
122894057 CDS
T08764
Symbol
TCOF1
Name
(RefSeq) treacle protein isoform X1
KO
K14562
Treacher Collins syndrome protein
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122894057 (TCOF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nvs03009
]
122894057 (TCOF1)
Ribosome biogenesis [BR:
nvs03009
]
Eukaryotic type
90S particles
Other 90S particles
122894057 (TCOF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Treacle
Motif
Other DBs
NCBI-GeneID:
122894057
NCBI-ProteinID:
XP_044087326
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All DBs
Position
1:complement(275016623..275054043)
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AA seq
1486 aa
AA seq
DB search
MAEARKRRELLPLIYQHLLQAGYVRAAREVKEQSGQKSFLTQPVTLMDIYTHWQQTSEVG
QKRKAEEDAALQAKKTRVSDPISSSESSEEEEEEEAEAEAAKATPRPAATNSSAAGPVLP
SGAKEKAKAKTKKASKMVNSTPHPASGKAVAHLLSGRSPRKSAEPSANTVLVSETEEEGG
VPALGTTAKPGLASANQVDSSSEETSSSSDETYVEMKPSVKPPQVKASPVPAKDSLGRGA
APTPGKAGDVTPQVRGGALTPSKAKVPEEDSESSEEESESEEGAPAEPPCQAKASDTVVQ
VRAASGPVKGTSGKGAAPAPPGKAGPAAAQATAGKPEEDSDSSSEEESDSEEEAPAAKTP
LQAKSSGKTPQVKGASASAKESPRKAAPALPPGKAGPVAAQVGKGKGEDAESSTEESDSE
EEAPAAVPPAKSPAQAKPLGQNSQFRAASGPVKGPPQKVGPSATPVGKQEEDSESSSEEE
SDSEAEAPAQAKSSGKIQVRPASGPAKGPPQKAGSVTTQGKAKVSKDDSESSEESDSDEK
VPAAPAPAQAKPAMKTPQIKASPKKGTPITPTTAKVPPVRVGTPAPWKVGAATSPACASS
PAMARGVQGPEDSSSSEESDSAEDLAPAPAVGQAKPVGKGVTVKTASTPTKGPSGQGTAA
APPGKAGLTVAPVKVKAELPEDSSESSEEDSDSEEATKAPAQMKASMKTPQNKANPAPTR
AASAKGAASALGKGVMAAAQAKQESPAKVKPPARTPQSNAVSGRSQGSMPAVGKAVATAA
PAQPGPVKSPQEEDSESSEEESDSDGEVPTQPAGKSPQVRTASAPSKELSRKGAATAPPK
KTGAIATQAGKPEEDSESSSEEESDSEEEAPAQAKPAIKHPQTKASLMKGVPGTPVSTEA
SVARDTPAPQKARPAIPAKKEGISKAARSKPLAPVAPEKNTEESSESSDEELPSSQVIKP
PLIFVDPNRSPAGPAATATHAPAINTPRKARASESTARSSSSGSEDEDVIPATQCSTPAS
RTSTSVLTAQPRPAVRANAVGAGSGAVSSRMSEGKKQEAPVAQVTKRSPAHLPLTQAALK
VLAQKASEAQPPAARTLSSSGVDNALGTLPVPAKGTNKVRKPEVPALQRATATPTGRTKA
KASDTSSDSNDSSGSSSGSEEDANGPRMAPSAPRLVGPAPSTTETLVEETTAESSEDEVV
APSQSLLSGYVTPGPTLANSQASKATPKPDLNPSASSTSATKDAPDGKQEVEPQHVAGAV
SPKTSRKEANSTPQKPRKAKKEAGNPQASVLALQSDISRRLLSEPWPLNEAQVQASVVKV
LTELLEQERKKAADAAKETGRKGRVGRKRKLSGDQTAARAPKSKKKKQLVAGGGGEGAGS
PEKALRTPKGKAKKDGASGNIKEKEKEAPGSRGAKEKPEGEPGTLKVEVGDQGNPKSKKE
KKSDKKKKDKEKKEKKKKVKKASTKDPDSPFQKKKKKKKKTAEQTV
NT seq
4461 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggccaggaaacgccgggagttgcttcccctgatctaccagcatctgttacag
gcgggctatgtgcgcgcggcgcgggaagtgaaggagcagagtggccagaaaagtttcctg
actcagcctgtaacccttatggacatctatactcactggcaacaaacctcagaggttggc
cagaagcggaaggcggaggaggatgcagcgctgcaggctaagaaaacccgagtgtcagac
cccattagcagctcggagagctcggaagaggaggaggaggaggaggcagaagctgaagcc
gccaaagccaccccaagaccagcggctaccaactcctcagcggcggggccggttttgcct
tcgggtgcaaaggagaaagccaaggcgaagaccaagaaagccagcaagatggtgaactcc
acaccacatccggcctctggaaaggcagtggcccaccttctgtctgggaggtcccccagg
aagtcagcagagccctcggcaaataccgttctggtttcagaaactgaagaggagggtggc
gtcccagcccttggaaccacagccaagcctggattggcctcagccaaccaggttgacagc
tccagcgaggagacctccagctcgagcgatgagacctacgtggagatgaaaccttcagta
aaaccaccccaggtcaaagcctcaccagtgcctgccaaggactctctcggaagaggagca
gccccaacacctgggaaagcaggggatgtgaccccccaagtcagaggaggtgccctgacc
ccatccaaggccaaggtgccagaagaggactccgagagcagcgaagaggagtctgagagt
gaggagggcgcccctgcagagccgccctgtcaggcgaaggcctcagacacagttgttcag
gtcagagctgcgtcgggtcctgtcaaggggacctctgggaaaggggccgccccagcaccc
cctgggaaggcaggtcctgcagctgcacaggccacggccgggaagccagaggaggactca
gacagcagcagtgaggaggagtctgacagcgaggaggaagcaccggctgccaagacccca
cttcaggcgaagtcttcagggaagaccccccaggtcaaaggtgcctcagcttctgccaag
gagtcccctaggaaagcggcccctgcattgccccctggcaaggcagggcctgtagccgcc
caggtggggaaggggaagggggaagacgcagagagtagcactgaggagtctgacagcgag
gaggaggccccagcagctgtgcccccagccaagagtcctgctcaggcaaaacctttgggg
caaaactcccaattcagagctgcctcgggtcctgtcaaggggccccctcagaaggtgggg
ccgtcagccaccccagtagggaaacaggaggaggactcagagagcagcagcgaggaggaa
tcagacagcgaggcagaggcgccggcccaggcaaaatcctctgggaagatccaggtcaga
cctgcctcaggtcctgccaaggggccccctcagaaggcagggtctgtgaccacccagggc
aaggccaaggtgtccaaggatgactcggagagcagtgaggagtccgacagtgatgagaag
gtgcctgcagccccggctccagcccaggcaaaaccagctatgaaaacaccccagatcaag
gcctccccaaagaagggcacccccattaccccaacaactgccaaggtccccccagtgcga
gtgggcacgccagctccttggaaggtgggagcagcaacttctccagcctgtgcctcatcc
ccagctatggccaggggcgtccaggggccagaggactcttcaagcagcgaggagtccgac
agtgcggaggacctcgctcctgccccagccgtgggacaggcaaagcctgtggggaaaggt
gtcaccgtgaaaactgcctctacacccaccaaagggccctcaggccaagggactgccgca
gcaccccctgggaaggcagggctcacagtggccccagtcaaagtcaaagctgagctgccg
gaagactcctcggagagcagtgaggaggactccgacagtgaggaggcgaccaaagctccc
gcccagatgaaggcctctatgaaaactcctcagaacaaagccaacccagctcccaccaga
gcagcttcagccaaaggggcagcatcagctctaggaaaaggggtcatggcagctgctcaa
gccaagcaggagtccccagccaaggtaaagccaccagcgagaactccccagagcaatgct
gtctcaggcaggagccaggggtccatgccagctgtgggaaaggcagtggccacagcagcc
ccggcacagccagggccagtcaagagcccacaggaggaggactccgagagcagcgaggag
gagtcggacagtgatggagaggtccccactcagcctgcagggaagagcccccaggtcaga
actgcctcagcccccagcaaggagctctccaggaaaggggctgcaacggcccctcccaag
aagacaggagccatagccacccaggcagggaagccggaggaggactcggaaagcagcagt
gaggaggagtctgacagcgaggaggaggcgccagcccaggcaaaacctgctataaagcac
ccccaaaccaaggcctccctgatgaaaggtgtcccgggcactcctgtatccactgaggcc
tccgtagcccgagacacgccagccccacagaaggcgagaccagcaattcctgccaagaag
gagggcatctccaaagctgccagaagcaagcccctggcaccagtagccccagagaagaac
acagaggagtcctcggagagcagtgacgaggagttgccatccagccaggtgattaaaccc
cctctgatttttgtcgaccctaaccgtagtccagctggcccggctgctaccgccacgcac
gccccagctataaacaccccaaggaaggcccgggcctcggagagcactgccaggagctcc
tcctctgggagtgaggatgaggatgtgatccccgcgacgcagtgttccactcctgccagt
agaaccagcacaagtgtgctcacggcccagccaaggccagccgtcagagccaacgccgtg
ggggccggcagtggcgcggtgtctagtcggatgtcagaaggcaagaaacaggaggcaccc
gttgctcaggtgacaaagaggagccctgctcacctcccgctgacccaggccgccctgaaa
gtccttgcccagaaagccagtgaggcccagcctcctgctgccaggaccctgtcttccagt
ggggttgataatgctctgggaacactccctgtgccagccaaggggaccaacaaggtcaga
aagcctgaggtccctgcgctccagcgtgccacagccactcccactggacgcaccaaagcc
aaggcctctgacacctccagtgacagcaatgacagcagcggcagctcctcagggagcgag
gaggatgctaacgggccccggatggctccctcggcccccaggctagtaggtccagccccc
tccacgacagagaccttggtggaggagaccacagcagagtccagcgaggacgaggtggtg
gcaccctctcagtctctcctctcaggttatgtgacccctgggccgactctggccaattcc
caagcttcaaaggccactcctaagccagacctcaacccttcggcttcttctacttctgcc
accaaagatgccccagacggcaagcaggaagtggaaccccaacatgtagcaggtgccgta
tcccctaaaacaagcagaaaagaggctaattccacgcctcagaagccccggaaggccaag
aaggaggccgggaacccccaggcctcagtgctggcactgcagagtgacatcagccggcgc
ctcctgagcgaaccttggcccctgaatgaggcccaggtgcaggcctcggtggtgaaggtc
ctgacggagctgctggagcaggagaggaagaaggctgcggatgctgccaaggagaccggc
aggaagggccgggtgggccgcaagaggaagctgtcgggggaccagacggccgccagagcc
cccaagagcaagaagaagaagcagctggtggctgggggaggtggggagggtgctggctcg
ccagaaaaggccctcaggactcccaaggggaaagccaagaaagatggagcaagtggtaac
atcaaggagaaggagaaagaggctcccggctcccgaggagccaaggagaagccagaaggg
gagccagggacactgaaggttgaggttggagaccaaggcaacccaaaaagcaagaaggag
aagaaatctgacaagaaaaagaaagacaaggaaaaaaaggaaaagaagaagaaagtaaaa
aaggcctcaaccaaagaccctgactcgccattccagaagaaaaagaagaaaaagaagaag
acggcagagcagacagtctga
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