Neogale vison (American mink): 122894087
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Entry
122894087 CDS
T08764
Symbol
PRPF39
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nvs03041
]
122894087 (PRPF39)
Spliceosome [BR:
nvs03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
122894087 (PRPF39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
TPR_16
TPR_MalT
ANAPC5
Motif
Other DBs
NCBI-GeneID:
122894087
NCBI-ProteinID:
XP_044087380
UniProt:
A0A8C7A5F5
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All DBs
Position
13:complement(53299159..53337635)
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AA seq
667 aa
AA seq
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MQNSHMDEYRNSSNGSTGNSSEVVVEQSADFSTEIMNVTEMEQSPDGSPNVNAAAEENEV
TNAVDLPVTETEANFPPEYEKFWKTVESNPQDFTGWVYLLQYVEQENHLMAARKAFDKFF
IHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLKETLDPGDP
ETNSTIRGTFEHAVLAAGTDFRSDRLWEMYINWENEQGNLREVTAIYDRILGIPTQLYSH
HFQRFKEHVQNNLPRDLLTGEQFIQLRRELASVNGHSGDDGPPGDDLPSGIEDITDPAKL
ITEIENMRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYLEF
EIENGTHERVVVLFERCVISCALYEEFWIKYAKYMENHSIEGVRHVFSRACTIHLPKKPM
VHMLWAAFEEQQGNINEARNILRTFEECVLGLAMVRLRRVSLERRHGNMEEAEHLLQDAI
KNARSNNESSFYAIKLARHLFKIQKNLPKSRKVLLEAIERDKENTKLYLNLLEMEYSGDL
KQNEENILNCFDRAIHGSLPIKMRITFSQRKVEFLEDFGSDVNKLLNAYDEHQTLLKEQD
SLKRKAENGSEEPEEKKVHTEDTTSSSTQMIDGDLQANQAAYNYSAWYQYNYQNPWNYGQ
YYPPPPT
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaattctcacatggatgagtacagaaattctagtaatggcagcacaggcaacagt
tcagaggtagtggtagaacagtctgctgatttcagtactgagattatgaatgtgacggaa
atggaacagtcccctgatggatctcctaatgtgaatgcagctgcagaagaaaatgaagta
acaaatgctgtggaccttccagtgacagaaacagaagcaaatttccctccagagtatgaa
aaattctggaaaactgtagaaagcaatcctcaggattttacaggctgggtatatttgctt
cagtatgtagaacaggagaatcacttgatggctgccaggaaagcgtttgacaaatttttc
atacactatccatattgctatggttactggaaaaagtatgcagaccttgaaaagcggcat
gacaacattaaacaatcagatgaggtatatcgtcgggggcttcaggcaatacctcttagt
gttgatctatggatacattatataaacttcttaaaagaaacattggaccctggtgatccc
gagacaaacagtacaataagaggaacttttgagcacgctgttctagctgcaggaacagat
ttccggtctgacagactgtgggaaatgtatataaactgggaaaatgaacagggtaacctg
agagaagttacagctatatatgatcgtattcttggtattccaacacagctgtatagtcac
cattttcagagatttaaagaacatgtacagaataacttgcctagagatctattaactggc
gaacagtttattcagctgcgaagggaattagcttctgtaaatggacatagtggtgatgat
ggtcctcctggtgatgatttgccgtcgggaattgaagacattaccgatccagcaaagctg
attacagaaatagaaaacatgagacatagaatcattgaaattcatcaagaaatgtttaat
tataatgagcatgaagttagtaaaaggtggacatttgaagaaggtataaaaagaccttat
tttcatgtgaaaccattggaaaaggcacaacttaaaaactggaaagaatacttagaattt
gaaattgaaaatgggactcatgaacgagttgtggttctctttgaaagatgtgtcatatca
tgtgccctctatgaggagttttggattaagtatgccaagtacatggaaaaccatagcatt
gaaggagtgaggcatgtcttcagcagagcttgcactattcatctcccaaagaaacccatg
gtgcatatgctttgggcagcttttgaggaacagcagggtaatattaacgaagccaggaat
atcttgagaacatttgaagaatgtgttctaggattggcaatggttcgtttgagaagagta
agtttagagcgacgacatggaaatatggaagaagctgaacatttgcttcaggatgccatt
aagaatgccagatcaaataatgaatcatcattttatgctatcaaactagctcggcatctt
ttcaaaatacaaaaaaaccttccaaaatcaagaaaggtgcttttggaagcaatcgaaaga
gacaaagagaatacaaagttatacctcaatttacttgaaatggaatatagtggtgacctc
aaacaaaatgaagaaaatatcctaaattgttttgacagagctatacatggttcattacct
attaaaatgagaattacattttctcagagaaaagtggaatttcttgaagattttggttct
gatgttaataagcttctgaatgcttatgatgaacatcaaacactcctaaaagaacaggat
tctttaaaaaggaaagcagaaaatggatcagaagaaccagaggaaaagaaagttcacaca
gaagatacaacttcatcatctacacagatgattgatggtgatttacaggcaaatcaagct
gcgtataattatagtgcctggtatcaatacaattatcagaatccttggaattatggacag
tattaccctccccctccaacctga
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