Neogale vison (American mink): 122894203
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Entry
122894203 CDS
T08764
Symbol
ATG2B
Name
(RefSeq) autophagy-related protein 2 homolog B isoform X1
KO
K17906
autophagy-related protein 2
Organism
nvs
Neogale vison (American mink)
Pathway
nvs04136
Autophagy - other
nvs04140
Autophagy - animal
nvs05010
Alzheimer disease
nvs05014
Amyotrophic lateral sclerosis
nvs05016
Huntington disease
nvs05017
Spinocerebellar ataxia
nvs05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122894203 (ATG2B)
04136 Autophagy - other
122894203 (ATG2B)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
122894203 (ATG2B)
05014 Amyotrophic lateral sclerosis
122894203 (ATG2B)
05016 Huntington disease
122894203 (ATG2B)
05017 Spinocerebellar ataxia
122894203 (ATG2B)
05022 Pathways of neurodegeneration - multiple diseases
122894203 (ATG2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nvs04131
]
122894203 (ATG2B)
03029 Mitochondrial biogenesis [BR:
nvs03029
]
122894203 (ATG2B)
Membrane trafficking [BR:
nvs04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
122894203 (ATG2B)
Mitochondrial biogenesis [BR:
nvs03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
122894203 (ATG2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
122894203
NCBI-ProteinID:
XP_044087645
LinkDB
All DBs
Position
13:8750567..8823256
Genome browser
AA seq
2077 aa
AA seq
DB search
MPWPFSESIKKRACRYLLQRYLGHFLQEKLSLEQLSLDLYQGTGSLAQVPLDKWCLNEIL
ESADAPLEVTEGFIQSISLSVPWGSLLQENCALEVKGLEMVFRPRPRLATGSEPMYWSSF
MTSSMQLAKECLSQKLTDEQGEASQPFEGLEKFAETIETVLRRVKVTFIDTVLRIEHVPE
NSKTGTALEIRIERTVYCDEAADEASGINVHQPTAFAHKLLQLSGVSLFWEEFSASAKSS
PVCSTAPAETEPKLSPSWNPKIVYEPHPQLTRSLPEVAPSDPVQIGGLIGRLELSLTLKQ
NEVLPGAKLDIDGQIDSIHLFLSPRQVHLLLDMLAAIAGPENSSKIGLANKDRKNRPMQQ
EDEYRIQMELNRYYLRKDSLSAGVSSEQSFYETESARTPSSREEEVFFSMADMDMSHSVS
SLPPLGDPPNMDLELSLTSTYTNTPAGSPLSATVLQPTWGDFLEPHKEQPVRGSTLPSNL
VHPPNLQKTSLPSRSVSVDESRPELIFRLAVGTFSISVLHIDPLSPPETSLNLNPLTPLA
IAFFTCIEKIDPARFSTDDFKSFRTVFAEACKHDHLRFIGTGIKVSYEQRQRPTSRYFST
DMSLGQMELLECLFPTDSHSVPPHYTELLMFHSKERADSHPPVCLQLHYKHSENKGPQGN
QARLSSVPQKAELQIKLNPVFCELDISIVDRLNSLLQPQKLTTVEMMASHMYTSYNKHIS
LHKAFTEVFLDDSHNPANCRISVQVATPALNLSVRFPIPDLRSDQERGPWFKKSLQKEIL
HLAFTDLEFKTEFIGGSNPEQIKLELTFRELVGSFQEDKGEPSVKFFHVSSGVDGDTASS
DDFDWPRIVLKLNPPAVHSILERIAAEEEESDGRYQEEEEGGAHSLKDVCDLRRPAPSPF
SSRRVMFENEQMVMPGDPVEMTEFQDKAISNSHYVLELTLPNVHITLPNKRFYEKLYNRI
FNDLLLWEPTAPSPVETFENISYGIGLSVASQLINTFNKDSFSPFKSTVHYDEESGSEEE
TLQYFSTVDPNYRSRRKKKLDSQNKNSQSFLSVLLSINHGLMAVFTDVRQDNGELLENKH
GEFWLEFNSGSLFCVTKYEGCDDKHYICLHSSSLSLYHKGLVDGVILPTETRLPSSTRPH
WLEPTIYSSEEDGLSRTSTDGVAGDTLNMLSVAVKILSDKSESNTKEFLTAVGLKGATLQ
HRMLPSGLSWHEQILYFLNIADEPVLGYNPPTSFTTFHVHLWSCALDYRPLHLPIRSLLT
VETFSVSSSVALDKSSSTLRIILDEAALHLSDKCNTVTINLNRDYVRVMDMGLLELTITA
VKSDSDGEQTEPRFELHCSSDVVHIRTCSDSCAALMNLIQYIASYGDFHAADKVEMKPGA
PQRKMKVDCSGRSSSRGPVLPEADQQMLRDLMSDAMEEVDLQQAAASAQAQANGVLDEKS
QTQEPCCSDLFLFPDESGNVSQEPGPPYTSFTHHSVSDAMARVPTENDDFCIIFAPRANV
QEKEEEPVVKVMVDDAIVIRENYFSQPAKKTDTSKAPLHFPIPVVRYVVKEVSLVWHLYG
GKDFGTVPPTSPAKSYISPHSSPSHTPTRHGRNMVCGGKGRNHDFLMEIQLSKVKFQHEV
YPPCKPECDSGLLEHPVSRQVFIVQDLEIRDRLATSQMNKFLYLYCSKEMPRKAHSNMLT
VKALHVRPESGRSPQECCLRVSLMPLRLNIDQDALFFLKDFFTSLSTEVELLMAPDPEVK
KSPGADVTCSLPRHLSTSKEPNLVLSFPGPKQPSQDDGPNSVGVVNGEEEKDFSAEEASF
SDQPVFFREFRFTSEVPIRLDYHGKHVSMDQGTLAGILIGLAQLNCSELKLKRLFYRHGL
LGVDKLFSYAMTEWLTDIKKNQLPGILGGVGPMHSLVQLVQGLKDLVWLPIEQYRKDGRI
VRGFQRGAASFGTSTAMAALELTNRMVQTIQAAAETAYDMVSPGTLSIEPKKIKRFPHHR
LAHQPVDLREGVAKAYSVVKEGLTDTAQTIYETAAREHESRGVTGAVGEVLRQIPPAVVK
PLIVATEATSNVLGGMRNQIRPDVRQDESQKWRHGED
NT seq
6234 nt
NT seq
+upstream
nt +downstream
nt
atgccttggccgttttccgagtccatcaagaagagggcctgtcggtacctcctgcagagg
tacctgggccacttcctgcaggagaagctgagcctggagcagctcagcctggacctgtac
cagggcaccgggtccctcgcccaagtccccttggacaaatggtgtctcaatgagatcctg
gagtcagcagatgcacctttagaagtcactgaaggattcatacagtcaatttctctatca
gttccgtggggctccttgctgcaggagaattgtgccctggaagtgaaagggctagaaatg
gtcttccggcctagaccccgcctagcaactggttctgagcctatgtattggtcaagtttc
atgaccagcagtatgcaattggcaaaagaatgtcttagccagaaattaacagatgaacaa
ggagaagcatcgcagccttttgaaggacttgaaaagtttgctgaaaccattgaaacagta
ctaagaagagtgaaagtcacatttatagacactgtcttgagaattgaacatgtgccagaa
aattccaaaactggaactgcacttgaaattcgaatagaaagaactgtctactgtgatgaa
gctgctgatgaggcctccggaattaatgtgcatcagcccacagcctttgctcacaagtta
ctccagctctccggagtgtctctcttctgggaggagttttctgcgtcagcaaaatcttcc
ccagtgtgttcaactgcaccagcggaaactgagccaaagctgtcacctagctggaatccc
aaaattgtatatgagccgcacccacaattaactagaagtttaccagaggtcgcgccctct
gacccagtgcagattggagggctaattggtagactggagttgagtctcacgctgaaacag
aatgaagtgcttcctggagctaagttggatattgatggacagatagactctattcatctc
ttcctgtcaccaaggcaggtgcacttgctcttggatatgttagcagctattgctggacca
gaaaattctagcaaaatagggttagctaataaagatagaaaaaaccgacccatgcagcaa
gaagatgaatatcgaattcagatggaattaaaccggtattatttgagaaaagattccctc
tcagcaggtgtatcttcagagcaaagcttttatgagacagaatctgctcgtacaccttct
agccgtgaagaagaagttttcttctccatggccgatatggacatgtcccatagtgtctct
tctcttccaccactgggagaccctccaaatatggaccttgagttatcattaactagtaca
tacacaaatactccagcaggatctccattaagtgctactgtgcttcagccaacatgggga
gatttccttgaacctcataaagaacagccagtaagagggtccacattgccgtccaaccta
gtacacccaccaaatttacagaagacttctcttccatctagatctgtttcagtggatgaa
tccaggcctgaacttattttcagactagctgtgggaaccttttccatttccgtgcttcac
attgatcctttatcaccacctgaaacatcattgaaccttaatccactgacgcctttggca
atagctttctttacctgtatagaaaagattgacccagcaagattttcaacagatgatttt
aagtcttttcgaacagtatttgcagaagcttgcaaacacgatcaccttagatttatagga
actggcatcaaagtgtcctatgaacaaagacagagaccaacttcccgatattttagtact
gatatgtcccttgggcaaatggaactcttggagtgcctgtttccaactgattctcattct
gttcctcctcactacacagagcttttaatgttccattccaaagaacgagcagattcccat
ccccctgtgtgccttcagcttcattataagcattctgagaataaaggaccccagggtaat
caagcaagactaagttctgttcctcagaaggcagaattacagattaagttaaatcctgtg
ttttgtgagctggatatcagtattgtggacaggttaaattccttgctccaaccacagaag
cttaccacagtagagatgatggcttcgcacatgtatacttcatacaataaacatattagt
ctccacaaggcttttactgaagtatttctggatgattcacataatcctgcaaattgtcgg
atatcagtacaagttgccacaccagcgttaaacctttccgttcgcttcccaatacctgat
cttcggtcagatcaagaaagagggccgtggtttaagaagtcacttcagaaggagatcctt
catttagcattcacagatctagaatttaagactgaatttataggaggatcaaacccggaa
caaattaaattggaacttacctttagagaactagtggggtcattccaggaagataaagga
gaaccgtctgttaagtttttccatgtgtctagtggcgtagatggagatacagcatcatca
gatgattttgactggccacgaattgtactgaagttaaacccgccagctgtgcattccatt
ttggagagaatagcagctgaggaagaggagagtgacggccgctaccaggaggaggaggag
ggaggtgctcattccctgaaggatgtttgtgatctgcgaagaccagccccatctcccttc
tcgtcgcggagagtcatgtttgaaaatgagcagatggtgatgccaggagaccctgtggaa
atgacagagtttcaggataaagcaatcagcaattctcactacgtgctggaacttacatta
cccaacgttcatataacactacctaataagcgcttttatgagaagctttataataggatc
tttaatgacttgctgctgtgggaaccaacagctccttcaccagtggagacatttgaaaat
atttcctatggtattggtctttctgtagccagtcagctgattaataccttcaacaaagat
agttttagtccatttaaatccacagtgcactacgatgaggagagtggatctgaggaggag
acgctgcagtatttttctactgtcgatcccaactatcgttcccgtaggaaaaaaaaacta
gattctcagaacaagaactcacagagttttctctcagttcttctgagtattaaccatgga
ctaatggcagtgtttacagatgttaggcaagataatggagagctgttggaaaataagcat
ggcgagttctggttagagttcaacagtggttcgttgttctgtgtgaccaagtatgaaggc
tgtgatgacaagcactacatctgccttcattccagcagtctcagtctctaccacaaaggt
ttggtagatggagtgattctccctacagaaacacgactgcccagttcaacccgcccacac
tggttggagcctactatttattcctctgaggaagatggcctcagtagaacttctacagat
ggcgttgcgggagacactttgaatatgctttctgttgcagttaaaatactatctgataag
tcagagtccaatacaaaggaatttctcactgccgtggggctgaaaggagccacgctgcag
cacaggatgcttccttctgggctcagctggcatgagcagattttatacttcttgaacatt
gctgatgaacctgttctgggatataatcctccaacttcgtttacaactttccatgtgcat
ctctggagctgtgcccttgattatagacctcttcacttgccgatccgatctcttctcact
gtggaaaccttcagcgtttcgagtagtgttgccttggacaaatcctcgtctactctcaga
ataatcttggatgaagctgctttgcatttgtctgacaagtgtaatactgttactataaat
ctgaatagagattatgttcgtgtgatggatatggggcttttggaattaaccataactgca
gtgaaatctgattccgatggagaacaaactgagccgcgcttcgagctccactgttccagt
gacgttgtgcatatccgaacgtgctcggactcctgtgccgcactcatgaacctcattcag
tacattgcaagctacggggacttccatgcggccgataaggtggagatgaagcctggagcc
cctcagagaaagatgaaggtagattgcagcggccgctcttcctcacgaggtccagtactt
cctgaagcagaccagcagatgttacgcgatttgatgagtgacgccatggaggaggttgac
ctgcagcaggccgccgcatctgcgcaagcccaggcgaacggtgttttggatgaaaaatct
caaactcaggagccatgttgttcagacctcttcctgtttccagatgagagtgggaacgtg
tcgcaggagcctggccccccttacacctccttcacacaccactcggttagtgatgccatg
gcacgtgtgcccacggagaatgacgacttttgcatcatttttgcaccaagagcaaacgtt
caggagaaggaggaagagccagttgtaaaagtgatggtcgatgatgcaattgtaataaga
gagaattactttagtcagcccgctaagaagacggacacgagcaaagccccattgcacttt
cctatccctgtcgtccgctatgttgttaaagaagtctctcttgtttggcatctttatgga
ggaaaggattttggaacagtccctcctacttctccagctaaaagttacattagtccccac
agttcaccttctcacactcccacaaggcatggacgtaacatggtatgtgggggaaaagga
agaaaccatgactttttaatggaaatacagttaagcaaggtgaagtttcagcatgaggtc
tacccgccctgcaagccagagtgtgactctggcctcttagagcacccagtctcccggcag
gtgttcatcgtgcaggatcttgaaattcgagaccgtctggcaacatcacaaatgaataag
tttttgtacctgtactgcagtaaagaaatgcctcgaaaagctcattccaacatgttgacc
gtgaaagcactgcatgtgcgcccggagtccggccggtcgccgcaggagtgctgcttgcga
gtgtccctgatgccccttcgcctcaatattgaccaggatgccttgttcttcctgaaggat
ttcttcacaagtctttctacagaagtagagcttctaatggctccagatccagaagttaaa
aagtctcctggagctgatgtcacctgcagtttgccaaggcacttaagcacctccaaggag
ccgaatctagttctttctttccctgggccaaagcaaccttcccaagatgatggtcccaac
tccgtgggagtggttaatggggaggaagagaaggacttctcagctgaagaggcatcattt
agtgatcagcccgtgttttttagagaatttagattcacatcagaagttcctattcgactt
gattatcatggcaaacacgtatcaatggatcagggtaccctggccggaattctgattggt
ctggcccagttaaactgctcagagctgaagctgaagaggcttttctaccggcatggcttg
ctaggtgttgacaaattgttttcgtatgcaatgaccgaatggcttactgacattaagaag
aaccagctaccaggaatcctgggaggtgttgggcctatgcattcactagtacaattagtg
caaggcctaaaggacttggtctggttgccgatagagcagtaccggaaggacggccgcatc
gtcagaggcttccagagaggggctgcctccttcggcacctcaacagcgatggctgcgcta
gagctcacaaacaggatggttcagaccatacaggccgcagcagagaccgcttatgacatg
gtgtctcctgggaccctttctattgagcccaagaagatcaaaaggttccctcatcaccgc
ttagcgcaccagcccgtggacctgcgggagggcgtggcgaaggcctacagtgttgtcaag
gagggactcacggacacggctcagacgatttatgaaaccgcagctcgagaacacgagagc
agaggggtcactggtgccgtgggtgaggtcctgcgccagattcctcctgcggtggtgaaa
cctctgattgttgccacagaagcgacatcaaatgtattaggcggcatgagaaaccaaatt
agacctgatgttcggcaagacgagtcacagaaatggcgccacggggaagactga
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integrated database retrieval system
