Neogale vison (American mink): 122895463
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Entry
122895463 CDS
T08764
Symbol
RABGEF1
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
nvs
Neogale vison (American mink)
Pathway
nvs04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
122895463 (RABGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nvs04131
]
122895463 (RABGEF1)
Membrane trafficking [BR:
nvs04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
122895463 (RABGEF1)
Protein recycling
Other Rab GTPase associated proteins
122895463 (RABGEF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
SSTK-IP
CID_GANP
Motif
Other DBs
NCBI-GeneID:
122895463
NCBI-ProteinID:
XP_044088825
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All DBs
Position
14:complement(16335945..16389582)
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AA seq
506 aa
AA seq
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MSLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQIQEDWELAER
LQREEEEAFASSQSSQGAQSLTFSKFEEKKTNEKTRKVTTVKKFFSASSRVGSKKAEIQE
AKAPSPSINRQTSIETDRVSKEFIEFLKTFHKTGQEIYKQTKMFLETMHYKRDLSIEEQS
ECTQDFYQNVAERMQTRGKVPPERVEKIMDQIEKYIMTRLYKYVFCPETTDDEKKDLAIQ
KRIRALHWVTPQMLCVPVNEEISEVSDMVVKAITDIIEMDSQRVPRDKLACITRCSKHIF
NAIKITRNEPASADDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNL
CCAVAFIEKLDAQSLNLSQEDFDRYMSGQTSPRKQESENWSPDACLGVKQMYKNLDLLSQ
LNERQERILSEARKLEKDLIEWTDGVAKQVQDIVEKYPLEIKPPNPSLAAIDSENVENDK
LPPPLQPQVYAGSRSARGWHLFEPQL
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgagccttaagtctgaacgccgagggattcatgtggatcagtccgagctcctgtgcaag
aaaggatgtggttactatggcaaccctgcttggcagggtttctgctccaagtgctggagg
gaagagtaccacaaagcaaggcagaagcagattcaggaggactgggagctggccgagcga
cttcagcgggaggaggaagaggcctttgccagcagccagagcagccagggggcccagtcc
ctcacattttccaagtttgaagaaaagaaaaccaatgagaagacccgcaaagtgaccaca
gtaaagaaattcttcagtgcttcgtccagggttggatcaaaaaaggcagaaattcaggaa
gcaaaagctcccagtccttccataaaccggcaaaccagcattgagacggatagagtgtct
aaagagttcatagaatttctcaagaccttccacaagacaggccaagaaatctataagcag
accaagatgtttttggaaacaatgcattacaaaagggatctaagcattgaggaacagtca
gagtgtactcaggatttttaccagaatgtggctgaaagaatgcagactcgtggaaaagtg
cctcctgaaagagttgagaagatcatggatcagatcgaaaagtacatcatgactcgtctc
tataagtacgtgttctgtccagagactaccgacgacgagaagaaggatctcgctattcag
aagaggatcagagccctgcactgggtcacacctcagatgctttgtgtccctgttaatgaa
gaaatttcagaagtgtccgatatggtggtgaaagcaatcacagatatcatcgagatggac
tcgcagcgggtgccgcgggacaagctggcctgcatcacccgctgcagcaagcacatcttc
aacgccatcaagatcaccaggaatgagccggcctcggccgacgacttcctcccgaccctc
atctacatcgtcctgaagggcaaccccccgcgcctgcagtccaacatccagtacatcacc
cgcttctgcaaccccagccggctgatgaccggcgaggacggctactacttcaccaacctg
tgctgtgctgtggctttcatcgagaagctggatgctcagtctttgaatttaagtcaggaa
gattttgatcgatacatgtctggccagacttctccccggaagcaggaatctgagaactgg
tctcctgacgcttgcctgggggtcaagcaaatgtacaagaacttggatcttctgtctcag
ttgaatgaacggcaagaaaggatcctgagtgaagccaggaaactggaaaaagatctcata
gagtggacagatggggtcgctaaacaggttcaggacatcgttgagaaatatccccttgag
atcaagcccccgaatccgtctttagcagctattgactctgaaaatgttgaaaatgataaa
cttcctccaccgctgcaacctcaggtgtacgcaggatcacggagcgcacgtgggtggcat
ttgtttgagcctcaactgtag
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