Neogale vison (American mink): 122895836
Help
Entry
122895836 CDS
T08764
Name
(RefSeq) helicase SRCAP
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122895836
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nvs03036
]
122895836
Chromosome and associated proteins [BR:
nvs03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
122895836
SWR1 complex
122895836
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
HDA2-3
Na_trans_assoc
Motif
Other DBs
NCBI-GeneID:
122895836
NCBI-ProteinID:
XP_044089517
LinkDB
All DBs
Position
14:39710599..39743215
Genome browser
AA seq
3243 aa
AA seq
DB search
MQSSPSPAHPQLPILQTQMVSDGMTGSNPVSPASSSSPASSGAGGLSPQHIAQDSSLDGP
PGPPDGATVPLEGLSLPQAADLANKGPKWEKSHAEIAEQAKHEAEIETRIAELRKEGFWS
LKRLPKVPEPPRPKGHWDYLCEEMQWLSADFAQERRWKRGVARKVVRMVIRHHEEQRQKE
ERARREEQAKLRRIASTMAKDVRQFWSNVEKVVQFKQQSRLEEKRKKALDLHLDFIVGQT
EKYSDLLSQSLNQPLASSKAGSSPCLGSSSAASSPPPPVSRLDDEDGDFQPQEEEEEDDE
ETIEVEEQQEGNDAETQRREIELLRREGELPLEELLRSLPPQLLGGPSSPSRTPSSRDSD
TRDGPEEGGEEEPSRVSQVKPPPSVTQRNKQPWHPDEDDEEFTANEDEAEDEEDTIAAEE
QLEGDVDHAMELSELAREGELSMEELLQQYAGAYASDASVPGSGSSEEEDEDELEANSSD
CEPEGATEAEEAPQEDSSSQSESAEEQSEEEEDEHSEEEETSSSSESEESESDESEESPS
QSQADEEEEEEEDDDDFGVEYLLARDEEQSEVDAGSGPPTPGPAAALGPKKEITDIAAAA
ESLQPKGYTLATTQVKTPIPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTI
QTISLLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQG
WTKPNAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRL
LLTGTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHK
VLRPFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTTKETLATGHFMSVI
NILMQLRKVCNHPNLFDPRPVTSPFITPGICFSTASLVLRATDVHPLQRIDMGRFDLIGL
EGRVSRYEADTFLPGHRLSRRVLLEVATAPDPPPRPKPVKMKVNRMLQPVPKQEGRTVVV
VNSPRTPMGPVPVRPPPGPELSTQPTPGAAPPVLPAPLMVSASPVGPPLIPASRPPGPVL
LPPLQPNSGPLPQVLPSPLGVLSGTSRPPTPTLSLKPAPPAPVRLSPAPPPGSSSLLKPL
TVPPGYAFPSAATTASTTTAAAPATAAPASAPAPQRLILSPDMQARLPSGEVVSIGQLAS
LAQRPVASAGGSKPLTFQIQGNKLTLTGAQVRQLAVGQPRPLQRNVVHLVSAGGQHHLIS
QPAHVALIQAVAPTPGPTPVSVLPSSTPSTTLAPTGLSLPLAANQVPPTMVNNTGVVKIV
VRQAPRDGLTPVPPLAPAPRPPSSGLPAVLTPRPTLAPGRLPTPTLGPARAPIPTSALVR
PLLKLVHGPSPEVSASAPGAAPLTISSPLPVQSSLPGPASSPMPIPNSSPLASPVSPPVS
VPVSSPLPSSISTAPPAPASAPLAVPVSAPLPAPASGPALLTNVTPALAPVVSAAPGPPS
LAPAGASPSASALTLGLATAPSLSSSQAPGHPLLLAPASSHVPGLNSAVAPACSPVLVPA
SALASPFPAAPNPAPAQASLLAPAPSASQALATSLAPMVAPQTAILAPSPAPSLAPLPVL
APSPGPAPLLAPSQTPVPVLASSSTPGTSLASASAMVPAPAPVSAPSSTQTMVPAPVPSP
LPSPASTQTLALAPVLPSTLGGSSPSQTLSLATGNPQGPFSAQTLSLTPASSLVPAPAQT
LSLAPGPPLGPSQTLSLAPAPPLTPASPMGPAPAHTLTLAPVSSSASLLTPASVQTLTLS
PAPVPVSTLGPAAAQTLALAPISTQAPASQTSSLVVSASGAAPLPVTMVSRLPVSKDEPE
TLTLRPGPPSPPSTATSFSGPRPRRQPPPPPRSPFYLDSLEEKRKRQRSERLERIFQLSE
AHGALAPVYGTEVLDFCTLPQPVASPIGPRSPGPSHPTFWTYTEAARQAVLFPQQRLDQL
SEIIERFIFVMPPVEAPPPSLHACHPPPWLAPRQAAFQEQLACELWPRARPLHRIVCNMR
TQFPDLRLIQYDCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRL
DGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQ
DRCHRIGQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIEGGNFTTAYFKQQTIREL
FDMPLEEPSGSSVPSAPEEEEETVASKQTHILEQALCRAEDEEDIRAATQAKAEQVAELA
EFNENDGFPAGEGEEASRPGAEDEEMSRAEQEIAALVEQLTPIERYAMKFLEASLEEVSR
EELKQAEEQVEAARKDLDQAKEEVFRLPQEEEEGPGAGDEVSCGTGGGSHRRSKKAKAPE
RPGTRVSERLRGARAETQGANHTPVTSPHHTRSTSTTPRCSPARERAPRPAPRPRPTPAS
APAVIPAPVPVPVPAPIPISAPNPITMLPVHILPSPPLPPSPIPPSCSSACTPPPACTPP
PAHTPPPTQTSLSTPSSPLLLGLPSVPVSPPVTNLSLGLGPEAELCAQALASTESPELAD
LASSETSPLPRVPPKDLLPVAVEILPVSEKNLSLASSAPSPTLEADSVPNGQEQEVPEPA
EGTVLTVLPDGEEVPSCLSESNGLDLPPSGASDELLPEPVEADKSSEELMEAQTPTSSPE
KPQELASPEVAAPSTSSSATSSPESPSPARPPRRRTSADVEIRGQGAGRPGQPPGPKVLR
KLPGRLVTVVEEKELVRRRRQQRGPASALVPGVSETGASPGSPSARSVSGPESSPPAGGP
CEAAPPSTLPTPTQQPFIARRRIELGVPGGGGPENGDRALLAISPPAVKRRRGRPPKKNR
SPADVGRGVDEVPSSTSKGKTNGADPVPGAETLIVAEPVLGPQLSPGPPPLGAPPVHRPE
PFILSPVEKRRRGRPPKARDVPIPGTISSPGDGNSESRTPPLPPPPPLPPLPPLLACPTA
PVANTVSSLTVPTSPPKRKRGRPPKNPPSPRPSRLPASDRDGSSVLESCGLGRRRQPQGQ
GESEGSSSDEDGSRPLTRLARLRLEAEGMRARKSEGSMVVAVIQDDLDLADSGPGGLELT
PPVVSLAPKLRSTRLRPGSLVPPLETEKVPRKRAGAPVGGGPGLAKRGRLQPPSPLGPEG
SVEESEAEASGEEEEGDGTPRRRPGPRRLGGATNQGDQRILRSSAPPHLTGPTISHRGRK
AKT
NT seq
9732 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcagcccctcccctgctcaccctcagctcccaatcctgcagacacagatggtg
tcggacggcatgacaggcagcaatcctgtgtcccctgcctcctccagttccccagcctct
agtggggcaggcggcctctccccccagcatatagctcaagattcctctctggatggacct
ccagggcccccagatggtgccacagtgcccctggaggggctcagcttaccccaggctgct
gacctggctaacaagggcccaaagtgggagaagagccatgctgagattgcagagcaggcc
aagcatgaggctgagattgagactcggattgctgagctgcggaaggagggtttctggtcg
ttaaagaggctgcctaaggtgcctgagcctccccgccccaaagggcactgggactatctt
tgtgaggagatgcagtggctctctgctgactttgctcaggagcgtcgttggaaacggggt
gtggcccgtaaggttgtgcgcatggtcatccggcaccacgaggagcaacggcagaaagag
gaacgggctcggagagaagagcaagccaagctacgccgaattgcctccaccatggctaag
gatgtcaggcagttttggagcaatgtggagaaggtggtgcaattcaagcagcagtcccgg
cttgaggaaaaacgtaaaaaagctctggatctgcacctggacttcattgtggggcaaact
gaaaagtactcagaccttttatctcagagcctcaaccagccactagcatccagcaaagct
ggctcttccccttgccttggctcttcctcagctgcctctagtcctccacccccggtttcc
cggctcgatgatgaagatggggacttccaaccccaagaggaggaggaagaggatgatgag
gagacgattgaggttgaagaacaacaggaaggcaatgatgcagagacccagaggcgtgag
attgagctgcttcgacgtgagggagaattgccattggaagagctgctccgttccctcccc
cctcagctgctaggagggccttccagcccctcaagaaccccctcatctcgtgacagtgac
acccgcgatgggcctgaagaaggtggtgaagaagagccgtctcgggtgtcacaggtgaag
cccccaccctctgtcacacagcgcaacaaacagccttggcatccagatgaggatgacgaa
gagtttactgccaatgaggatgaagcggaggatgaagaggataccatagcagctgaggag
cagttggaaggggacgtggaccatgccatggagctgagcgagttggctcgagaaggtgag
ctctcaatggaggagctactgcagcagtacgcaggagcctatgcttccgacgcctctgtc
ccaggctctgggagtagtgaagaggaagacgaagatgagcttgaggctaacagctctgac
tgtgaaccagagggggccacagaagccgaagaggctcctcaagaggatagtagcagtcag
tcagaatctgctgaggagcagagcgaggaagaggaagatgagcattcggaggaggaagaa
acgagcagcagttccgaatcagaggaatctgagtctgacgagtctgaggagtctccatca
cagagccaggcagatgaggaggaggaggaggaggaagacgatgacgacttcggggtggag
tacttgcttgccagggatgaggagcagagtgaggtagacgcggggagtggacctcccacc
ccaggacctgccgctgccctaggccctaagaaggaaattactgacatcgcggcggcagct
gaaagtcttcagcccaagggttataccttggccaccacgcaggtgaagacgcccatcccc
ctgctcctgcggggccagctccgggagtaccagcacattgggctggactggctggttact
atgtatgagaagaaactgaatggtattcttgctgatgaaatggggctaggcaagacaatc
cagacgatctccctgcttgctcacttggcctgtgaaaaaggtaactggggtccccatttg
atcattgtccccaccagtgtgatgctgaactgggagatggagctgaagcggtggtgtccc
agctttaaaatcctcacttactatggagcccagaaagagaggaagctcaagcggcagggc
tggaccaagcccaatgccttccacgtgtgtatcacgtcttacaagctggtgctgcaggac
caccaggccttccgtcgcaagaactggcgttatctcattctggacgaggctcagaacatc
aagaacttcaagtcccagcgctggcagtccctgctcaacttcaacagccagagacgcctg
ctcctcacaggaactccactgcagaacagcctcatggagctgtggtccttgatgcacttt
ctgatgccccatgtcttccagtctcatcgcgagtttaaagaatggttctctaaccccctc
acgggcatgattgagggcagccaagagtacaatgaaggtctggtcaaacgcctgcacaag
gttttgcggccttttttgctgcgccgggttaaggtggatgttgagaagcagatgcctaaa
aaatatgagcatgttatccgctgccggctctccaagcgtcagcgctgtctctatgatgac
ttcatggcacagaccaccactaaggagacactagccacaggccatttcatgagtgtcatc
aacattttgatgcagctacgaaaagtctgcaatcatccaaacctgtttgaccctcgacct
gttacctcccccttcatcaccccaggaatctgcttcagcaccgcctctctggtgctaagg
gccactgatgtccaccccctccagcggatagacatgggtcggttcgatcttattggcctg
gagggtcgtgtctctagatacgaagctgacacatttctacccgggcaccgcctctcccgc
cgggtgctgctggaggtggccacggctcctgatcccccaccccggcccaaacccgtcaag
atgaaggtcaacaggatgctgcagccagtgcccaagcaggaaggccgtacagtggtggtg
gtgaacagcccacggacccccatgggccctgtccctgtccgaccccctccaggccctgag
ctctccacccagcccacccctggcgcagcccccccagtgctgccagcaccactgatggtg
tcggcctcgcctgttgggcccccgcttattccggcatcccggcctcctggccctgttctg
ttgcccccactgcagccaaacagtgggcctctgccccaggtgttgccatcccccctgggg
gtccttagtgggacctcacggcctcctacgccaaccctgtccctgaaaccggccccacct
gctcctgttcgcctaagccccgccccgcccccgggctcctccagcctgttgaagcccctg
acagtgccaccgggctacgcgttcccttccgctgccaccaccgcctccaccaccacggct
gctgctcccgccacggcggcaccggcttcggctcctgcaccgcagcgcctcatcttgtct
cctgatatgcaggctcgcctgccttcaggcgaagtggtcagcatcgggcagttggcctca
ctggcacagcgtccagtggccagcgcaggggggagcaagcctctcaccttccagatccag
ggcaacaagctgactctgactggtgcgcaggtgcgccagcttgctgtggggcagccccgc
ccgctgcaaaggaatgtggtgcacctggtgtccgcaggggggcagcaccacctcatcagc
cagcctgcccatgtggctctcatccaggccgtggccccgacccctggccccacccctgtc
tctgtgctgccttcttcgacccccagcaccacccttgcccccactggcctcagccttccg
cttgctgctaaccaggtgccaccaaccatggtgaataatacaggcgtggtgaagattgtc
gtgagacaggcccctcgggacggactgactcctgttcctccattggccccggcaccccgg
cctccgagttccgggcttccagctgtgttgactccacgccccacattagcccctggccgg
ctgcccacgcctactctgggtcctgcccgcgcccccattcccacgtccgctctggtgagg
ccccttctcaagctggtccacggtccttcgcccgaagtcagtgcttcagcacccggagct
gctcccttgaccatctcttctcctctccctgtgcagtcctcactccctgggccagcctct
tctccaatgccgattcccaactcctccccccttgctagccccgtgtcccctccagtctcc
gttccagtgtcgtctccacttcccagctccatctccaccgcgcctcctgccccggcgtca
gctccactcgccgtccctgtctccgcccccctgcctgctccggcttctggcccggctctg
ttgaccaacgtgaccccagcgctggcacctgttgtctcagcggctcctggacctccctct
ttggcaccggctggggcttccccatcagcgtccgctttgactctaggtttggccacagct
ccgtccctgtcttcatctcaggcgcctggtcaccctctgttgttggctccagcctcttcc
catgttccaggcttgaactcagctgtggccccggcatgttcgcctgtcctggtaccagct
tctgctctggccagtccttttccggcagcaccaaatccagctccagctcaggcttccctt
ctggctccagcaccttctgcatctcaggctctagccacctctctggctcccatggtggct
ccacagacagcaatcctggctccttctccagctccttctctggctcctcttccagtcctg
gctccgtcgccaggtcctgctcccctcctggctccatcgcagactccggttccagttctg
gcttcatcgtctactccaggaacctctttagcttcggcttctgcaatggtgccagccccg
gctcctgtgtcggctccatcatcaacgcagaccatggtaccggccccggttccatcacct
cttccaagtccagcttctacacagacactggccttagccccagttttaccatccactctt
ggtggctcttctccatctcagaccctctctttggcaacggggaaccctcaggggcctttt
tcagctcagacattgtcattgactccagcgtcatccctagtaccagctccagcccagacc
ttgtctttggcaccaggaccaccactgggtccatcacagacgctgtctctggctccggca
ccccctttgactccagcttctccgatgggcccagccccagctcacacgctgactctggct
ccagtatcgtcatctgcttcactcctgaccccagcttcagtgcaaacattgaccttgagc
cctgccccagttccggtgtccaccttgggtccagctgcagcccagactctggcgctggcc
ccaatctcaacacaggccccagcttcccagacatcctcccttgtggtttcggcatctggc
gctgctcccttgcccgtcaccatggtatcccggctgcccgtttccaaggatgagcctgag
acactgacattgcgccctggtccccccagccctccctccactgctacctcgttcagtggt
ccccggcctcgacgccagcccccaccaccacctcgttcccctttctatctggactctctg
gaggaaaagcggaagcggcagcggtctgaacgcctggaacggattttccaacttagtgag
gctcatggggccctggcacctgtgtatgggactgaagtcctggatttctgtaccctgccc
caacctgttgccagccccatcggccctcgttctcctggccccagccaccccaccttttgg
acttataccgaggctgcccgccaggctgtactgtttccccagcaacgactagaccagctg
tcagaaatcattgagaggttcatctttgtcatgcctcctgtggaggcacctcccccttcc
ctgcatgcctgccacccacctccttggctggccccacgtcaggcagccttccaagagcaa
ttggcctgtgagctctggccacgggctcgtcctttgcaccgtattgtgtgtaacatgcgc
actcagttccctgacttgaggctcatccagtatgactgtggaaagttgcaaacattggca
gtgctgttgcgacagctcaaggcggagggccaccgggtgctcatattcacccagatgacc
cggatgctggatgtattagaacagtttctcacctaccatggccacctctacttgcgtctg
gatgggtctactagagttgaacagagacaggctttgatggaacgattcaatgcagacaaa
cgcatattctgcttcatcctttcaactcggagtgggggtgtgggtgtgaacctgacagga
gcagatactgttgttttttatgacagcgactggaatcccaccatggatgctcaggcccag
gatcgctgtcaccgaattggccagacccgagatgtccacatctacagacttatcagtgaa
cggacagtggaggagaacatcctaaaaaaggcaaatcagaagagaatgttgggagacatg
gccattgagggaggcaacttcaccacagcctattttaaacagcagaccatccgagagctg
tttgatatgcccctggaagagccatctggctcatctgtaccctctgcccctgaagaggag
gaggagactgtagccagcaagcagacccatatcctggagcaggcactgtgtcgggcagag
gatgaagaggatatccgtgcggccacccaggccaaggccgaacaggtggctgagcttgca
gaattcaatgagaatgatgggtttcctgctggtgagggagaggaggccagccggcctggg
gctgaggatgaagagatgtcccgagctgagcaagaaatcgctgcccttgtagaacagctg
acccccattgagcgctacgccatgaaattcctggaagcttccctggaggaggtgagccga
gaggagctcaagcaagcagaagaacaggtggaagctgcccgcaaggatctggaccaagcc
aaggaggaggtgttccgcctaccccaagaggaggaggaggggccaggggctggggatgag
gtttcctgtgggactggtggaggcagtcaccggcgcagtaagaaggccaaggccccagaa
aggccagggactcgcgtcagtgagcgtcttcgtggagcccgggctgagactcaaggggca
aaccacacccctgtcacatccccccatcacacccgcagcacttccacaaccccacgctgc
agccctgccagggagagggctccccggccagcacctaggccccggcccactccagcttca
gctcctgctgtaattcctgccccagtccctgttccagttcctgccccgatccccatttca
gccccaaatccaataaccatgcttcctgttcatatcttgccctctcccccactgcctcct
tcaccgattcctccctcttgttcttccgcctgtacccctcctcccgcctgtacccctcct
ccagctcatacgccacctcccacccaaacttctctctccactccttcctcgcctctccta
cttggtctgccttctgtgcccgtctccccgccggtcaccaacctctccctgggcttgggg
ccggaggcagagctgtgcgcacaagcgttggcgtctaccgagtccccggagctggctgat
ttggccagttccgagacgtccccgcttcctcgtgtgccccctaaggatctgttgccagtt
gctgttgagatcctgcctgtatcagagaagaacctttctctcgcctcttctgcacctagc
ccaaccctggaggctgacagcgtccccaacggtcaagagcaggaagttccagagcctgct
gaggggaccgtcctcacagtgctgcctgacggtgaggaggtgccctcgtgtctgagtgag
agcaatgggctggatctcccaccttcaggagcatctgatgagctacttccggagcccgtg
gaggctgacaagagctcagaagagctgatggaggcccagaccccaacctccagcccagag
aagccccaggaacttgcttcaccagaggtcgcagccccatccacctcatcctccgccacc
tcctcgccggagagcccttcacctgcccggccccctcggcgtcgcaccagtgccgatgta
gaaattaggggtcagggggctggtcggccagggcagcctccaggccccaaagtgctccgc
aagctgccgggacggctggtgaccgtggttgaggagaaggaattggtgaggcgacggcgg
cagcagcggggaccggccagcgccctagtgcctggcgtgtccgagacgggcgccagcccg
ggaagcccgtctgcccgcagcgtgtcggggccggaatcctcacctcccgccggtgggccc
tgtgaagcggcccccccatccacactgcccaccccaacccagcagcccttcatagctcgc
cgtcgcattgagctgggggtgcccggtgggggcggcccagagaatggagacagggcactg
cttgccatcagccctccagctgtgaaacgtcggagggggaggccccccaagaagaacagg
tctccagcagatgttgggcgaggggtggatgaggtgccttcatccacctctaagggaaaa
accaacggggctgacccagtccctggggctgagacccttattgtggcggagcctgtcctg
ggaccccagcttagtcctgggcccccgcctctcggagccccgcccgttcacagaccagag
cccttcatcctgtcacctgtggagaagagaaggcgggggcggccccctaaggcacgagat
gtgcccattcctgggaccatttcctctccaggggatggcaactcagagagccggacaccg
ccgctcccgccgccacctcccctgccaccactcccgcctctcctagcctgtcccacagct
cctgtcgccaacactgtcagcagtctcaccgttccaacgtccccacccaagcggaagcgg
ggccggcctcccaagaacccaccgtcccctcggcccagccggctccctgcctcggaccgt
gacggctcttccgtccttgagagctgtgggttggggaggcggcggcaaccccagggccag
ggggagagtgagggcagttcctctgacgaggacggaagccgccccctcacccgcctggcc
cgcttgcggcttgaagcggaaggaatgcgggcacgaaagagcgaagggtccatggtggtg
gccgtaattcaggatgacctggatttagcggatagtgggccaggcgggttggaattgaca
cctcccgtggtctcgctggctccaaaactgcgctccacccgcctgcggccagggtctctg
gtccccccgctagagactgagaaggtgcctcgcaaacgggcgggggccccagttggcggg
ggtcctgggctggcaaagcggggccgcctacaacctccaagtcccctgggacctgagggt
tcagtagaggagtctgaggctgaagcctcaggtgaggaggaggaaggggatgggacccca
cgacgccggcctggcccccgccgacttggtggggccaccaaccaaggggaccagcgcatt
ctgcgcagcagcgcccctccccatctgactggccctaccattagtcacagaggccgcaag
gccaagacgtga
DBGET
integrated database retrieval system