Neogale vison (American mink): 122895844
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Entry
122895844 CDS
T08764
Symbol
GSPT1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122895844 (GSPT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvs03019
]
122895844 (GSPT1)
03012 Translation factors [BR:
nvs03012
]
122895844 (GSPT1)
Messenger RNA biogenesis [BR:
nvs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
122895844 (GSPT1)
Translation factors [BR:
nvs03012
]
Eukaryotic type
Release factors
122895844 (GSPT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
122895844
NCBI-ProteinID:
XP_044089527
LinkDB
All DBs
Position
14:complement(24956411..24995954)
Genome browser
AA seq
640 aa
AA seq
DB search
MDPGSGGGGGGGGGSSSGSSSSDSAPDCWDQADMEAPGPGPCGGAGGPLAAAAATEAQRE
HLSAAFSRQLNVNAKPFVPNVHAAEFVPSFLRGPAQQPPPPAGAAAPNHGAGSGAGGPPA
PVEPSQEEQSLLCEGSNSAVSMELSEPVVENGETEMSPEESWEHKEEISEAELGGGSLGD
GRPPEEGTQEMMEEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTG
MVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDA
PGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLI
NKMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWY
TGLPFIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKH
NVEVLGILSDDVETDSVAPGENLKIRLKGIEEEEILPGFILCDLNNLCHSGRTFDAQIVI
IEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRT
AGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggatccgggcagtggcggtggcggcggcggcggcggcgggagcagcagcggcagcagc
agcagcgactcggcgcccgactgttgggaccaggcggacatggaagcccccgggccgggc
ccgtgtggcggcgccggcggccccttggcggctgcggcggcgaccgaggcccagcgtgag
cacctcagtgcggccttcagccggcaactcaacgtcaacgccaagcccttcgtgcccaac
gtccacgccgccgagttcgtgccgtccttcctgcggggcccggcccagcagccgccgccc
ccagctggcgccgccgcccccaaccacggagccggcagcggcgcgggaggccctccggca
cctgtggaaccttctcaggaggaacaatcattattgtgtgaaggttcaaattcagctgtt
agcatggaactttcagaacctgttgtagaaaatggggagacagaaatgtccccggaagaa
tcatgggagcacaaagaagaaataagtgaagcagagttagggggtggttccttgggagat
ggaagacccccagaggagggcacccaagaaatgatggaggaggaagaggaaataccaaaa
cctaaatctgtggtcgcaccccctggggctcctaaaaaagaacatgtaaatgtggtattc
atcggacatgtagatgctggcaagtcaaccattggaggacaaataatgtatttgactgga
atggttgacaaaaggacacttgagaaatatgaaagagaagctaaagagaagaacagagaa
acttggtatctgtcttgggccttagatacaaatcaggaagaacgagacaagggtaaaaca
gtagaagtgggccgtgcctattttgaaacagaaaagaaacatttcacaattctggatgcc
cctggccacaagagttttgtccccaatatgataggtggcgcttctcaagctgatttggcc
gtgctggtcatctctgctcggaaaggagagtttgaaactggatttgagaaaggcggacag
acgagagaacacgcaatgttggcaaagacggcgggtgtgaagcacttgattgtgcttatt
aataagatggatgatccgacggtaaattggagcaacgagagatacgaagaatgtaaagag
aaactagtgccatttttgaaaaaagttggcttcaatcccaaaaaggacattcacttcatg
ccatgctcaggactgacgggagcaaatcttaaagagcagtcagacttttgtccttggtac
actggattaccatttattccttacctggataatttgccaaacttcaatagatcagttgat
ggaccaatcaggctgccaattgtggataagtacaaggatatgggcactgtggtcctggga
aagctggaatcaggatctatttgtaaaggccagcagcttgtgatgatgccaaacaagcac
aatgtggaagttcttggaatcctttccgatgatgtagaaactgattctgtagctccaggt
gaaaacctcaaaatcagactgaaaggaattgaagaggaggagattcttccaggattcata
ctttgtgatcttaataatctttgtcattctggacgcacatttgatgcccagatagtgatc
atagagcacaaatcgatcatctgcccaggttataatgcggtgctgcatattcacacctgt
attgaggaagtcgaaataacagccttaatctgcttggtagacaaaaaatcaggagaaaaa
agtaagactcgacctcgttttgtgaaacaagatcaagtatgcattgctcgcttaaggaca
gcaggaaccatctgccttgagacctttaaagacttccctcagatggggcgctttacctta
cgagatgagggtaaaaccattgcaattgggaaagttctgaaactggttccagagaaagac
taa
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