Neogale vison (American mink): 122895865
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Entry
122895865 CDS
T08764
Symbol
IFT140
Name
(RefSeq) intraflagellar transport protein 140 homolog isoform X1
KO
K19672
intraflagellar transport protein 140
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
nvs03037
]
122895865 (IFT140)
Cilium and associated proteins [BR:
nvs03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
122895865 (IFT140)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_HPS5
WD40
WD40_Prp19
TPR_IFT80_172
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_CAF1B_HIR1
TPR_COPA_B
TPR_GEMI5
Beta-prop_WDR75_1st
Clathrin
RNase_HII
Consortin_N
tRNA_int_end_N2
Motif
Other DBs
NCBI-GeneID:
122895865
NCBI-ProteinID:
XP_044089555
UniProt:
A0A8C7BZD5
LinkDB
All DBs
Position
14:494041..565635
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AA seq
1459 aa
AA seq
DB search
MALYFDHRIEAPDSAGSPSHIHWHPVHPFLAVASVSTTSGGSVGIYLEQGEHVPDTHVER
SFRVTCLCWHPTRLVLAAGWETGEVTVLNKQDREQHAVPPTHTSDITVLEWSPSGNCLMS
GDRLGVLLLWRLDQRGRVQGTPLLKHDHGKPLTHCIFRVPPPGEDLVQLAKAAVSGDERA
LDMFNWRKSSFGSFLKMRSQEGLSFFVSLMDGTVHYVDEKGKTTQVASTESSVQTLFYIE
KKEALVVVTQNLLLSLYAVRPEGEAEEVMKVKLSGKTGHRADIALIEGSVLVTAVGEPVL
RFWDLEGGENYVLSPEEKSGFEKAENINCVSYCKAKGLLAAGTDKGRVAMWRKLPGLQSS
REAEGKDRWTLQTPTELEGNITQIKWGSRKNLLAVNNISSVVILREQAMSSHFHQQVAVV
QMSPSLLSVSFLSTGVTHSLRTDTHVSGAFATKDAIAVWNGKQVVVFEPSGTTLRTAGTF
LCESPVLAMYEDNVYTVEPNRVQVRTWQGTVKQLLLFSEAEGNPCFLDVCGNFLVVGTDL
AHFKSFDLSRREAKVHCGDKNLAALIPGAVAVASLRCNASGSKISILLSKADNSPDSKIC
FYDVEMDTVTILDLKTGQIDQRETLSLNGQETKKSHAFMDEKLMDLIPVNHFWDQSEPRL
FVCEAVREAPGDQQQPRDKKPPTEDSPSPTADVMILSFFVTEEHGFLLQDSFPRPPAYQN
LLGIEVPHYYFTRKPGEADREEQGDSGCPCVGRRPLRDFVGLEDCDKATRDAMLHFSLFV
TVGDMDEAFKSIKLIKSEAVWENMARMCVKTQRLDVAKVCLGNMGHARGARALREAEREP
EPEARVAMLAIQLGMLEDAEQLYRKCGRYDLVNKLYQASDQWQKAVEVAELHDRIHLRAT
YYNYARHLEASTDRGLALSYYEKSDTHRFEVPRMLSEDLQSLEMYISKMKDKTLWRWWAQ
YLESQAEMDAALRYYELAEDYFSLVRIHCFQGNIQKAAEIANESGNWAASYHLARQYESQ
EEVRQAVHFYSRAQAFNNAIRLCKENGLDDQLMNLALLSSPEDMTEAALYYEDKGEHMDR
AVMLYHKAGHFSKALELAFATQQFVALQLIAEDLDERSDPALLARCSDFFIEHSQYEKAV
ELLLAAKKYHEALQLCLEQNMTITEDMAEKMTVSKDSKDLSEESRRQLLEQIANCCMRQG
SYHLATKKYTQAGNKLKAMRALLKSGDTEKIVFFAGVSRQKEIYIMAANYLQALDWRKEP
EIMRNIISFYTKGRALDLLAGFYDACAQVEIDEYQNYDKAHGALTEAYKCLSKAKAKSPL
DQETKLAQLQSKMTLVKRFIQARRTYAEDPKEAVRQCELLLEEPELDSTVRIGDVCGFLV
QHFLQAEDFQTAYRYLEEMRKRVPPANMSYYVSQRTVDAVHQGLGLPLVRTMPERICRSS
VDDRKEVDEEVLEEVESEP
NT seq
4380 nt
NT seq
+upstream
nt +downstream
nt
atggcgctctattttgaccaccgaatagaagccccagactctgccgggtctccttcgcac
atccactggcaccccgttcatccattcctggcggtggcctctgtcagcacgacctcagga
ggcagcgtgggcatatacctggaacaaggcgagcacgtgcctgatacacacgtggagagg
tcctttcgggtcacttgcctgtgctggcacccgacgcgcctggtgctcgctgccgggtgg
gagaccggagaagtgacggtgttgaacaagcaggacagggagcagcacgcggtgcccccc
acacacacctccgacattaccgtcctcgagtggagccccagcgggaactgcctcatgtct
ggggacaggctcggtgtcctgctcttgtggaggttggaccaaaggggtcgagtgcaaggg
acgccgctgctgaaacacgatcacgggaaacccctaactcactgcatcttccgggtcccc
cctcctggcgaggacctcgttcagttggcgaaggcggctgtgagcggtgatgagagagcc
ctggacatgtttaactggaggaaaagtagctttggaagtttcctgaaaatgcgatctcaa
gaggggctatccttctttgtcagcttgatggatgggacggtgcactacgtggatgagaaa
ggcaagaccacccaggtggcttccacagaaagctctgtccagactctcttctacatcgag
aaaaaggaggccctagtggtggtcacgcagaacctgctgctgtccctgtacgcggtgagg
cccgagggcgaagcagaggaagtgatgaaggtcaagttgagtgggaagacaggtcaccgg
gcagacatcgccctgattgaaggcagcgtgcttgtgactgccgtgggggagcccgttctc
agattctgggacttagaaggtggagagaattacgtgctgagtccagaggagaagtccggt
ttcgaaaaagctgaaaatataaactgtgtttcttactgtaaagccaagggtcttctggca
gcggggaccgataaagggcgagtagccatgtggagaaaactgccaggccttcagagcagc
cgagaggcagagggcaaggacaggtggacacttcagacccccactgagcttgaaggcaac
atcacacagataaagtggggctcccggaagaacctcctggctgtgaacaacatcagctcc
gtggtgatcctccgcgagcaggccatgtcctcacacttccaccagcaagtggccgtggtg
cagatgtccccaagcttactcagcgtgtccttcctgtccacgggggtgacgcacagcctg
cgcacagacacgcacgtcagcggggcgttcgccaccaaggatgccattgctgtctggaat
gggaaacaggtggtggtcttcgagccttctggaaccacgttacggactgcaggaaccttc
ctgtgcgagtctcccgtgttagccatgtatgaggacaatgtgtacaccgtggagccaaac
cgagttcaagttcgaacctggcaggggaccgtgaaacagctcctactgttctccgaggca
gaggggaacccatgcttccttgacgtctgtggaaatttcctggttgtggggacagacctg
gctcactttaaaagctttgatctttcccgaagggaggcgaaggtgcactgcggtgacaag
aacctggcggcactgatcccgggtgctgtggccgtggcctcgctcaggtgtaacgccagc
ggcagcaagatcagcatcctcctcagcaaggcagacaacagccccgactccaaaatctgc
ttctatgatgtggaaatggacacggtgaccatcctcgacctcaagacggggcagattgat
cagagggagacattgtccctcaacggccaagagaccaagaagagccacgccttcatggat
gagaagttgatggatctcatccctgtgaaccatttctgggaccagagcgagcccaggctg
tttgtgtgcgaggccgtgcgggaggcgccgggagaccagcagcagcccagggacaagaag
ccacccactgaagacagtcccagccccacggcggacgtgatgattctgtccttcttcgtg
acggaggagcacggcttcttgctccaggacagcttcccccggcctcccgcctaccagaat
cttctggggattgaagtgcctcattattacttcacgagaaagccaggagaagcagacaga
gaagagcagggggactcaggttgcccgtgcgtgggcaggagacccctacgagacttcgtc
gggctggaggactgtgataaggccacgcgggacgccatgcttcacttcagtctgttcgtc
accgtcggagacatggatgaagccttcaagtctatcaaactcatcaaaagtgaggcggtc
tgggagaacatggcgcgcatgtgcgtgaagacccagcggctggacgtcgccaaggtgtgc
ctagggaacatgggccacgcgcgtggagcacgtgcactgcgggaggctgagcgggagccg
gagccggaggccagggtggccatgctggccatccagctgggtatgctggaggatgcggag
cagttgtataggaagtgcgggcgctacgacctcgtgaacaagctgtaccaggcctctgac
cagtggcagaaggccgtggaggtcgcggagctccatgaccgtatccacctgcgggccacc
tactacaactacgccaggcacctggaggccagcactgaccgcggtctggccctcagctac
tacgagaagtcagacacccaccgcttcgaggtgcccaggatgctgtcggaggacctgcaa
tcgctggagatgtacatcagtaagatgaaggacaagaccctgtggcggtggtgggcccag
tacctggagagccaggccgagatggacgcggcgttgcgctactacgagctggcggaggac
tacttctccctggtccgcatccactgcttccagggcaacattcagaaggctgctgagatc
gccaacgagagcggcaactgggcagcgtcctaccacctggcccgccagtacgagagccag
gaggaggtgaggcaggcggtgcacttctactcgcgggcgcaggccttcaacaatgccatc
cgcctctgcaaggagaatggcctggatgaccagctcatgaacctggccctgctgagctcg
cccgaggacatgaccgaggcagcgctctactatgaggacaagggcgagcacatggacagg
gcggtcatgctgtaccacaaggctggccacttctccaaggccctggagctggcctttgcc
acccagcagttcgtggccctgcagctcatagcagaggacctggacgagcgctcagacccc
gccctgctggcccgctgttctgacttcttcattgagcacagccagtacgagaaggcggtc
gagctgctgctggccgcaaagaagtaccacgaagctctgcagctttgcctggagcagaac
atgaccatcaccgaggacatggcggagaagatgactgtgtccaaggattccaaggacctg
tcggaggagtctcggcgccagctgctggagcagatcgccaactgctgcatgcgccagggc
agctaccacctggccaccaagaagtacacgcaggcggggaacaagctgaaggccatgaga
gcactgctgaagtctggggacacggagaagatcgtgttcttcgcgggcgtctcgaggcag
aaggaaatctacatcatggccgccaactacctgcaggccctcgactggcggaaggagcca
gagatcatgaggaacatcatcagcttctacaccaagggccgggccctcgacctgctggcc
ggcttctacgacgcctgtgcccaggtggagatcgacgagtaccagaactacgacaaagcc
cacggggcgctgacggaggcctacaagtgcctgtccaaggccaaggccaagagccccctg
gatcaagagaccaagctggctcagctgcaaagcaagatgacgctggtgaagcggttcatc
caggcccgcaggacgtacgccgaggaccccaaggaggcggtccggcagtgtgagctgctg
ctggaggagcccgagctggacagcaccgtccgcatcggggacgtctgcggcttcctggtg
cagcacttcctgcaggccgaggacttccagacggcctacaggtacctggaggagatgcgg
aagcgggtgccgcctgccaacatgtcctactacgtgagccagcggaccgtggacgccgtg
caccagggcctgggcctccccctggtgcgcaccatgcctgagcgcatttgccgcagcagc
gtggacgaccgcaaggaagtagacgaggaggtgctggaggaggtggagagtgagccctga
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integrated database retrieval system
