Neogale vison (American mink): 122895942
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Entry
122895942 CDS
T08764
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nvs01002
]
122895942 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nvs04121
]
122895942 (USP42)
Enzymes [BR:
nvs01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122895942 (USP42)
Peptidases and inhibitors [BR:
nvs01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122895942 (USP42)
Ubiquitin system [BR:
nvs04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122895942 (USP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
122895942
NCBI-ProteinID:
XP_044089735
UniProt:
A0A8C7ASV6
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All DBs
Position
14:complement(6596674..6648950)
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AA seq
1334 aa
AA seq
DB search
MTIVDKASESSDPSAYQNQPGSSEAVSPGDMDAGSASWGAVSSLNDVSNHTLSLGPVPGA
VVYSSSSVPDKSKPSPQKDQALGDGIAPPQKVLFPSEKICLKWQQTHRVGAGLQNLGNTC
FANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPGDVIKPMFVI
NEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQATTLVCQIFGGYLRS
RVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPA
SKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPIIYVLYAVL
VHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRSHDVKNGGE
LTHSTHSPGQSSPRPVISQRVVNSKQAAAGFIGPQLPSHMTKNPPHLNGTGPLKEAPSSS
MSSPGANSSVSRAGSVNASTSVQNWSVNRPSVIPEHPKKQKITISIHNKLPVRQGQSQPN
LHSGSLENPTKPVPSSTITNSSAIQPTSSAPTTAVSSKVTKQMTPSESCSQPVMNGKSKL
SSSVLVPYGAESSEESDEEAKGLGKENGLGTIESSDSSVQDAEDDEACPLELREPLALNG
ADSTDSDLKENGLPCDGASCQVPPTLHSENPFSKANGLPGKLMPAPLPPLPEDKVLETFK
LSNKVKGSTEETSAPGTEEGPADDLGAELEAGSPSPESHEKPETLTSLSSKLKKALPSLD
PSVKSTKEEVSENILAKPEESLPSANTLCSSTKNTVGDDPLPKLCSPGDLTDDQSRTPQA
GSGVLLESPRASAAVEAAGSSSPSAPVHSEGACEHELLVYISRDTCSDLEDPPRSGGAAV
EGLPSPQADKITENHSEGGPEQSNGEKCEENMVGQKVPDHSPVKEKISILRKVDRGHYRN
RRDRSSSGERARESRSKTEERYHKKRRSSVRERGPKQDRYRTERGSGGQHHPCHGERLSP
GERRSLGRYGPHHSRGRGGSDQEWSRYHPPEGEHSWAREKYYPDRLRWDKCRHYHDRYAP
YAAREVREWRPFPGAREYAKAGPSGGRPYKDYYRGRKGHELLAKGKDRHRFGSPRAGPPH
ALLPYPDKYPHEKIALAAEDTNCNLADRFHEHENAKSRKRRYDSLENSDGHLERKAWRGF
QKDPLEEPKVKKHKKSKKKKKSKDKHRGRDSRHQQDSDLSVACSDADLHRHKKKKKKKKR
HSRKSEDFVKDSELHLPKAVSHETVDRFRRTDGAFPLTDGLPLEGAGPFREKRKHLRMGS
RDDRGPLSECGQGD
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacaaagcttctgaatcttcagacccatcagcctatcagaatcagcct
ggcagctccgaggcggtctcacctggagacatggatgcgggttctgccagctggggagct
gtgtcttcgctaaatgatgtttcaaatcacacactttctttaggaccagtacctggtgct
gtagtttattcaagttcatctgtacctgataaatcaaaaccatcaccacaaaaggaccaa
gccctaggtgatggcattgctcctccacaaaaagttcttttcccatctgagaagatttgt
cttaagtggcagcagactcatagagttggagcggggctccagaatttgggcaatacgtgt
tttgccaacgcagcactgcagtgtttgacttacacgccgcctcttgccaattacatgcta
tctcatgaacactccaagacatgtcatgcagaaggattttgtatgatgtgtacaatgcaa
gcacatatcacccaggcgctcagtaatcctggggatgttattaagccgatgttcgtcatt
aatgagatgcggcgtatagctaggcacttccgctttggaaaccaagaagatgcccacgaa
ttccttcagtacactgttgatgctatgcaaaaagcatgcttgaatggcagcaataaatta
gacagacacacccaggctaccaccctcgtttgtcagatatttggaggatacctaagatcg
agagtcaagtgtttaaattgcaaaggtgtctcggatacattcgacccatatctcgatata
acgttggagataaaggccgctcagagtgtgaacaaggcgttggagcagtttgtgaagccg
gagcagctcgacggggaaaactcttacaagtgcagcaagtgtaaaaagatggttccagct
tcaaagaggttcactatacacagatcctctaatgttcttacactttctctgaaacgtttt
gcaaattttactggtggaaaaattgctaaggatgtgaaataccctgaatatcttgatatc
cgaccgtacatgtctcagccgaatggagaaccgatcatctatgttctgtacgcagtgctg
gtgcacacgggctttaactgccacgctggccactacttctgctacatcaaagcgagcaat
ggcctctggtaccaaatgaatgactccatcgtatctaccagtgatattagatcggtactc
agtcagcaagcttacgttctcttttatatcaggtcccacgatgtgaaaaatggaggtgaa
ctcactcattccactcacagccccggccagtcctcaccccgacctgtgatcagccagcgc
gtcgtcaacagcaaacaggctgcggcggggtttatcggaccgcagctgccctctcacatg
acaaagaatccacctcacttaaatgggaccgggccactgaaggaagcaccgagcagttcc
atgtcgagtcccggtgcaaattccagtgtcagccgggctggttctgttaatgcttcgact
tctgttcaaaactggtctgttaacaggccatcagtgattccagaacaccccaagaaacaa
aaaatcacgatcagtattcacaacaagttacctgttcgccaaggccagtctcagcccaac
cttcacagtggttctttggagaacccaaccaagcctgttccctcttctaccattaccaac
tcttctgcaatacagcctacctcgagcgcgcccacgacggcggtttctagtaaagtcaca
aagcagatgaccccaagcgagtcctgttctcagcccgtgatgaacggcaagtccaagctg
agctccagcgtcctggtgccctatggcgcggagtcgtccgaagagtccgacgaggaggca
aagggcctaggcaaggagaacggcctcggtacgatcgagagctcggactcttctgtgcag
gatgcggaagacgacgaggcctgtccgctcgagcttcgagagccccttgctctgaacggt
gctgacagtacagacagcgacctgaaggaaaacggtctgccttgtgatggtgccagttgc
caagtcccgcctactctacactcagaaaatcccttttctaaggcgaatggtctgccggga
aagttgatgcctgctcctctgccgcctctcccagaagacaaagtcttagagaccttcaaa
ctcagcaacaaggtgaaaggttcgacagaagaaaccagtgctcctggaacagaggaaggt
cctgcagacgatcttggcgcggagctggaggccggcagtccctctcccgagtcccatgag
aaaccggagaccctcacgagccttagcagcaagttaaagaaggctttgccatccttagac
cccagtgtcaaatctaccaaagaagaagtctctgaaaacattttagcaaaacccgaggag
tctttgcccagtgccaacaccctttgcagcagtactaagaataccgtgggcgacgatcca
ctccctaaactgtgcagccccggggacttaacagatgaccagagcagaacaccccaggcc
ggatcgggggtgttactagagagcccccgggcctcggccgcagtggaggctgcggggagt
tccagcccaagtgcccccgtacactctgagggtgcctgtgagcacgaactcttagtctac
atcagtcgagacacgtgctcggacttggaggaccctcctcggagcggaggtgcggcggtc
gagggcttgccctctcctcaagcagacaagatcacagaaaatcattcagaagggggcccc
gaacaaagtaacggggagaaatgtgaagaaaacatggttggacaaaaggttccagatcat
tctccagttaaggaaaaaatcagtatcctcagaaaagttgatcgaggacattatcgcaac
cgaagagatcgttcctccagcggagagcgtgcgcgggagagcaggagcaagaccgaggag
cgctaccacaaaaagcggcgctcgtctgtgcgggagcggggccccaagcaggaccgttac
aggacggagcgcggcagcgggggccagcaccacccctgtcacggcgagaggctcagcccc
ggcgagcgccgctccctgggcaggtacggcccccaccactcccgcggcagaggcggctca
gaccaggagtggagcaggtaccacccccccgaaggcgagcactcctgggcccgggagaag
tactaccccgacagactgcggtgggacaagtgtaggcattaccacgacaggtacgccccg
tacgcggcccgggaggtgcgtgagtggaggcccttccccggcgcccgtgagtacgccaag
gcgggcccgtccggcggccggccctacaaggactactacagggggcggaagggccacgag
ctgctcgccaaggggaaggaccggcaccgcttcggcagcccccgggcaggcccgccgcac
gccctcctcccgtaccccgacaagtacccccacgagaaaattgcacttgcagccgaagac
accaattgtaacctcgccgatcgcttccacgaacacgagaatgccaagtcccggaaacgg
agatacgacagcctggagaacagtgatggtcacctcgagagaaaggcctggaggggcttc
cagaaggatcccttggaagagcctaaagtgaagaagcacaaaaaatcaaagaagaaaaag
aaatccaaagacaaacaccgaggccgagattccaggcatcagcaggactccgatctttca
gtagcatgctctgatgctgatctccacagacacaaaaaaaagaagaagaaaaagaagagg
cactccaggaagtccgaggactttgttaaagactcagagctgcacctgcccaaggccgtc
agccatgagactgttgaccgtttccggagaacggacggcgctttccccctcaccgacggc
ctgcctctggaaggtgctgggcctttccgtgagaagagaaaacacttaaggatgggaagc
agggatgacaggggtcctctgtctgagtgtggccagggtgattga
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