Neogale vison (American mink): 122895983
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Entry
122895983 CDS
T08764
Symbol
TRIM56
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM56
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nvs04121
]
122895983 (TRIM56)
Enzymes [BR:
nvs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122895983 (TRIM56)
Ubiquitin system [BR:
nvs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122895983 (TRIM56)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-C3HC4_4
zf-RING_5
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
122895983
NCBI-ProteinID:
XP_044089812
UniProt:
A0A8C7ABF7
LinkDB
All DBs
Position
14:9458204..9461682
Genome browser
AA seq
771 aa
AA seq
DB search
MVSQGSSPSLLEALSSDFLACKICLEQLRAPKTLPCLHTYCQDCLAQLADGGHLRCPECR
ETVPVPPAGVAAFKTNFFVNGLLDLVRARAGGDLRAGKPACALCPLMGGAGTGGPATARC
LDCADDLCQACADGHRCTRQTHTHRVVDLVGYRAGWYDEEARERQAAQCPQHPGEALRFL
CQPCSQLLCRECRLDPHLDHPCLPLAEAVRARRPGLEELLAGVDNNLAELESARMVEKEA
LARLREQAARVGTQVEEVAEGVLRALLAQKQEVLGQLRAHVEAAEEAARERLGELEGREQ
VARAAAAFARRVLSLGREAEILSLEGAIAQRLRQLQGCPWMPAPAPGLLPRLELHPGLLD
KNCHLLRLCFEEQQPQKDSGKDEAGGQGGDEVQSQREGGAMSEKQGGIQPQSRDGANTPK
ENRAQTPQEEGSQTPKEERSKTPQEDGAHTPKEGRAQTPLEDEGAQTPRGSRSNKKRKFK
GRLKSISREPSPAPGLNLEGSGLLPRPIFSCSFPTRMPGDKRSPRITGLCPFGPREILVA
DEQNRALKRFSLSGDYRGAVPVPEGCSPCSVAALQGAVAFSAGARLYLISPDGEVQWRRA
LSLSQASHAVAAMPSGDRVAVSVSGHVEVYNMEGSLATRFIPGGKANRGLRALVFLTTSP
QGNFVGSDWQQNSVVVCDGLGQVIGEYRGPGLHGCQPGSVSVDKKGYIFLTLREVNKVVI
LDPKGSLLGDFLTAYHGLEKPRVTTMVDGRHLVVSLSNGTIHVFRVRPPDS
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggtttcccagggatcctcaccctccctcctggaagccctgagcagcgatttcctagcc
tgtaaaatatgcctggagcagcttcgcgcccccaagacgttgccctgcctgcacacctac
tgccaggactgcctggcccagctggccgatggcggccacctgcgctgccctgagtgccgc
gagacggtgcccgtgccgcctgcgggtgtggccgccttcaagaccaacttcttcgtcaac
gggctcttggatctggtgagggcccgagctggcggagacctgcgcgcggggaagcccgcc
tgtgcgctgtgtcccctgatggggggggccggcaccggggggccggccacggcccggtgc
ttggactgtgcggacgacctatgccaggcgtgtgccgacggccaccgttgcacccggcag
acccacacccaccgggtggtggacctggtgggctacagggcaggctggtacgacgaggag
gcccgggagcgccaggcggcccagtgcccccagcatcctggggaagccctgcgcttcctg
tgccagccctgctcccagctgctgtgccgcgagtgccgcctggacccccacctggaccac
ccctgcctacccctggccgaggccgtgcgcgcccggaggcccggcctggaggagctgctg
gcgggtgtggacaacaacctggcggagctcgagtccgcccggatggtggaaaaggaagcc
ttggcccggctgcgggagcaggcggcgagggtggggacccaggtggaggaggtggccgag
ggggtgctccgggccctcctggcccagaagcaagaggtgctggggcagctacgggcccac
gtggaggctgcggaggaggccgctcgggagagactgggggagctggagggccgggagcag
gtggccagggccgcggccgccttcgcccggcgggtgctcagcctgggccgcgaggctgag
atcctctcgctggaaggggcgattgcccagaggctccggcagctgcagggctgcccctgg
atgcctgcgccggcccccggcctgctgccccggctggagctccatcctgggctcctggac
aagaactgccacctgctacggctctgctttgaggagcagcagccccagaaggacagtggg
aaagacgaagctggaggccagggaggggatgaagttcagagccagagagaggggggagcc
atgtcggagaaacaaggtggaatccagccccagagcagggatggcgctaacaccccaaag
gagaacagagcccagacgccccaagaagagggatcccagaccccgaaggaggagagatcc
aagacgccccaggaagatggagcccacaccccaaaagagggcagagcccagacaccccta
gaagacgaaggagcccagaccccaaggggcagcagatccaacaagaagaggaagttcaaa
ggcaggctcaagtccatttcccgggagcccagcccagcacctgggctaaacctggagggc
tccggcctcctccccaggcccattttttcctgcagcttccccacgcgcatgcctggagac
aagcggtctcctcggatcacagggctctgtcccttcggtccccgggagatcctggtggcc
gatgagcagaacagggcactgaagcgcttctccctcagtggtgactacaggggcgcagtg
cccgtccccgagggctgctccccgtgcagcgtggccgccctgcagggggcagtggccttc
tcggccggcgcacggctctacctcatcagccccgacggcgaggtgcagtggcgccgggcc
ttgagcctctcccaggccagccacgctgtggccgcgatgccgagcggggaccgggtggcc
gtcagcgtgtcgggccacgtggaggtgtacaacatggaaggcagcctggccacccggttt
atcccggggggcaaggccaacaggggcctgcgggctctggtgttcctgaccaccagcccc
cagggcaattttgtggggtccgactggcagcagaacagcgtggtggtctgtgacgggctg
ggtcaggtgatcggggagtaccgggggccaggcctgcacggctgccagccaggctctgtg
tccgtggataagaagggctacatctttctgacccttcgcgaggtcaacaaagtggtgatc
ctggatccgaaggggtcactgctcggtgacttcctgacggcctatcacggcctggaaaag
cccagggtgaccaccatggtggatggcaggcacctggttgtgtccctcagtaatgggacc
atccacgtctttcgggtccgccctcctgatagttaa
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