Neogale vison (American mink): 122896147
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Entry
122896147 CDS
T08764
Symbol
ATXN2L
Name
(RefSeq) ataxin-2-like protein isoform X1
KO
K23625
ataxin 2/2L
Organism
nvs
Neogale vison (American mink)
Pathway
nvs05014
Amyotrophic lateral sclerosis
nvs05017
Spinocerebellar ataxia
nvs05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
122896147 (ATXN2L)
05017 Spinocerebellar ataxia
122896147 (ATXN2L)
05022 Pathways of neurodegeneration - multiple diseases
122896147 (ATXN2L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvs03019
]
122896147 (ATXN2L)
Messenger RNA biogenesis [BR:
nvs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
122896147 (ATXN2L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
DUF5415
Motif
Other DBs
NCBI-GeneID:
122896147
NCBI-ProteinID:
XP_044090102
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All DBs
Position
14:complement(38639802..38652765)
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AA seq
1070 aa
AA seq
DB search
MLKPQPPQQTSQPQQPPPTQQAVARRPPGGTSPPNGGLPGPLASTSAPAGPPAAASPCLG
PAAAAGSGLRRGAEGILAPQPPPQQQHQERPGTTAVGSARGQSTGKGPPQSPVFEGVYNN
SRMLHFLTAVVGSTCDVKVKNGTTYEGIFKTLSSKFELAVDAVHRKASEPAGGPRREDIV
DTMVFKPSDVMLVHFRNVDFNYATKDKFTDSAIAMNSKVNGEHKEKVLQRWEGGDSNSDD
YDLESDMSNGWDPNEMFKFNEENYGVKTTYDSSLSSYTVPLEKDNSEEFRQRELRAAQLA
REIESSPQYRLRIAMENDDGRTEEEKHSAVQRQGSGRESPSLASREGKYIPLPQRVREGP
RGGVRCSSSRGGRPGLSSLPPRGPHHLDSSSPGPGSETRGINGGPSRMSPKAQRPLRGGA
KTLSSASSRPSGEAPVAPPPAAFPFLPVGRMYPPRSPKSAAPAPISASCPDAPMGSAVPT
SSASIPVTSSVVDPGVGSISPASPKISLAPTDVKELAAKEPGRTLESQELSRIAGKVPGL
QNEQKRFQLEELRKFGAQFKLQPSSSPETSLDPFPPRILKEEAKGKEKEVDGLLTSEPMG
SPVSSKTESVSDKEDKPPLPPAGGTEGPEQPPPPCPSQTGSPPVGLIKGDDKDEGPVAEQ
VKKSTLNPNAKEFNPTKPLLSVNKSTSTPTSPGPRTHSTPSIPVLTAGQSGLYSPQYISY
IPQIHMGPAVQAPQMYPYPVSNSVPGQQGKYRGAKGSLPPQRSDQHQPASAPPMMQAAAA
AGPPLVAATPYSSYIPYSPQQFPGQPAMMQPMAHYPSQPVFAPMLQSSPRMLASGSHPQA
IVSSSTPQYPSAEQPTPQALYATVHQSYPHHATQLHAHQPQPAATPTGSQPQPQHAAPSP
VQHQAGQAPHLGSGQPQQNLYHPGALTGTPPSLPPGPSAQSPQSSFPQPAAVYAIHAHQQ
LPHGFTNMAHVTQAHVQTGITAAPPPHPGAPHPPQVMLLHPPQSHGGPPQGAVPQSGVPA
LSASTPSPYPYIGHPQGEQPGQAPGFPGGADDRIPPLPPPGELKIVLAAT
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagcctcagccgccacaacagacctcccagccccagcagccgccccccacgcaa
caggccgtggcccgccggcctcccgggggcaccagccctcccaacggcggcctcccgggg
cccctggcctccacctcggctcccgcaggacctcccgcggccgcttctccctgcctgggg
cctgcagccgccgccgggagtgggctccgccggggagccgagggcatcttggcgccgcag
cccccgccgcagcagcagcatcaggagaggccggggacaacggctgtcggcagcgccagg
ggacagagcacaggaaagggacccccacagtcaccggtgttcgagggtgtctacaacaat
tccagaatgctgcattttcttacagctgttgtgggctccacctgtgatgtaaaggtgaag
aatggtaccacctatgaaggtatcttcaagactctgagctcaaagtttgaattagcagta
gacgctgtacaccggaaagcatctgagccagcaggtggccctcgtcgggaagacattgtg
gacaccatggtgtttaagccaagcgatgtcatgctcgtccacttccgaaatgttgacttc
aattatgctactaaagataagttcactgattcagccattgccatgaactcgaaggtgaat
ggggagcacaaagaaaaggtgcttcagcgctgggaagggggcgacagcaacagcgatgac
tatgacctggagtctgacatgtccaacggatgggaccccaacgaaatgttcaagttcaac
gaggagaactatggtgtgaagactacatatgacagcagtctgtcttcttacacggtgccc
ttggagaaggacaactcagaagagtttcgtcagcgggagctgcgtgcagcccagttggct
cgggagattgaatcaagcccccagtaccgcctgcggatcgccatggagaacgatgatggg
cggacagaggaggagaagcacagtgcagtccagcggcagggttcaggacgggagagcccc
agcttggcatcaagggagggaaagtacatccctctaccccagcgagttcgggaaggtcca
cggggaggagttcgatgcagtagttcccggggtggccggcctggccttagctctttgcca
cctcgtggccctcaccaccttgacagtagcagccccggcccgggttctgagacacgtggt
atcaacggaggcccttcccgcatgtcccctaaggcccagcggcccctgagaggtggtgcc
aagactctgtcttcagccagcagtaggccttctggagaagctcctgtggcacctcctccg
gcagctttccctttccttccagtgggccggatgtaccccccgcgctctcccaagtcggct
gctcctgccccaatctcagcttcctgtcctgatgcccccatgggctcagcagtaccgacc
tcttcagcttccatccctgtgacatcatcggttgtggatcctggagtcggctccatttcc
cctgcttctccaaagatctcattggcccccacagatgtaaaagaacttgcagccaaggaa
cctgggagaacgctggagtcccaggagctgtcccggatagctgggaaagttcctggcctt
cagaatgaacagaaacgctttcaactggaagaactgaggaaatttggggcccagtttaag
ctgcagcccagtagctcccctgagaccagcctggatccttttcctccccggatcttaaag
gaggaggccaaaggaaaagagaaggaggttgatggtctgttgacttcagagccaatgggg
tccccagtctcctcgaagacagagtccgtatcagataaggaggacaagccaccactgccg
ccggcgggaggcacggagggcccagagcagcccccgccaccttgcccaagccaaactggc
agccccccggtgggcctcatcaagggagacgacaaggatgagggcccagttgctgaacaa
gtgaagaagtcaacactgaaccccaatgccaaggagttcaatcccacaaagcctctgctg
tctgtgaataaatccaccagtacccccacttctccggggccccggactcactctactccc
tccatcccggtgctgacagcaggccagagtgggctgtacagcccccagtacatttcctac
atacctcagatccatatgggaccagctgttcaggcccctcagatgtatccgtaccctgta
tccaattctgtgcctggacagcagggcaaataccggggagcaaaaggctccctgcccccc
cagcgctcggaccagcaccagccagcctcagcccctccgatgatgcaggccgccgccgcc
gccggcccacctctggtggctgccacgccgtactcttcctacatcccttacagcccgcag
cagttccccggccagcccgccatgatgcagcccatggcccactacccctcgcagccggtg
tttgcccccatgcttcagagcagcccacgcatgctggcgtcggggagccatccccaggcc
atcgtctcgtcctccacccctcagtacccttccgcagagcagcccaccccccaggccctc
tatgccaccgtccaccagtcctacccacaccacgccacgcagctccatgcgcaccagccg
cagccggccgccacgcccactgggagccagccgcagccgcagcacgcggcccccagtccc
gtccagcaccaggcggggcaggccccacacctgggcagtggacagccacagcagaatctg
taccacccaggggccctgacaggcacgccgccttctctgccaccgggaccgtctgcccag
tcccctcagagcagcttcccccagccagccgctgtgtatgccatccatgcccaccagcag
ctgccccacggcttcaccaacatggcccacgttacccaggcccatgtccaaactggaatc
acagcagccccgccccctcaccctggggctccccacccgccccaggtgatgctgctgcac
ccaccccagagccatgggggccccccccaaggcgcggtgccccagagtggggtgcctgca
ctctcagcttccacaccctcaccctacccctacatcggacacccccaaggtgagcagcct
ggccaggcgcctggatttccaggaggagccgatgacaggattcctccccttccacccccc
ggggaactgaagattgtcctggccgcgacctga
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