Neogale vison (American mink): 122896304
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Entry
122896304 CDS
T08764
Symbol
POLA1
Name
(RefSeq) DNA polymerase alpha catalytic subunit isoform X1
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122896304 (POLA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nvs03032
]
122896304 (POLA1)
Enzymes [BR:
nvs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
122896304 (POLA1)
DNA replication proteins [BR:
nvs03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
122896304 (POLA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DUF1744
DNA_pol_B_2
MTR4_beta-barrel
Motif
Other DBs
NCBI-GeneID:
122896304
NCBI-ProteinID:
XP_044090299
LinkDB
All DBs
Position
X:complement(111354799..111658488)
Genome browser
AA seq
1467 aa
AA seq
DB search
MAPVHGEDCDTGSSAVSDSGSFVASRSRREKKSKRGQQEALERLKRAKAGEKYKYEVEDF
TSVYEEVDEEQYSKLVQARQDDDWIVDDDGIGYVEDGREIFDDDLEDDALDFHEKGKDDK
ARTKDRRNVKKAAVTKPNNIKSMFIASAGKKTADKVVDLSKDDLLGDILQDLNTEKPQIT
PPPVMIPKKKRSIGVSLNPFSVHTPKVVPSGKTASPVLRKEPPLTSVPLKCAEFAGEPVP
ALCVDDKEDSGAMDFEDGDFDEPMEAEEVDVEPVAVKTWHQESEPAEGVKHEADPGKGTT
SYLGSFLPDVSCWDIDQEDDSSFSAQEVQVDASHLPLVKGTDEEQVFQFYWLDAYEDQYN
QPGVVFLFGKVWIESAKTHVSCCVMVKNIERTLYFLPREMKIDRSTGKETETPVTMKDVY
DEFDEKIAAKYKIMKFKSKPVEKNYAFEIPDVPEKSEYLEVRYSAEMPQLPQDLKGETFS
HVFGTNTSSLELFLMNRKIRGPCWLEVKNPQLLNQPVSWCKVEAMALKPDLVNVIKDVGP
PPLVVMSFSMKTMQNAKTHQNEIIAVAALVHHSFALDKAPPQPPFQSHFCVVSKPKDCIF
PYTFKEDIKEKNVKVEIAATERTLLGFFLAKVHKIDPDIIVGHNIYGFELEVLLQRINVC
KVPHWSKIGRLKRSNMPKLGGRGGFGERNATCGRMICDVEISAKELIRCKSYHLSELVQQ
ILRTERFEIPMENVRNMYSESSHLLYLLEHTWKDARFILQIMCELNVLPLALQITNIAGN
IMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRKPQQKLGDEDEDIDGDANKYKKGR
KKAAYAGGLVLDPKAGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASEAQKITEDGE
QEQIPELPDPNLEMGILPREIRKLVERRKQVKQLMKQQDLNPDLVLQYDIRQKALKLTAN
SMYGCLGFSYSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTDSIMINTNSTD
LEEVYKLGNKVKSEVNKLYKLLEIDIDGVFKSLLLLKKKKYGALVVEPTSDGNYSTKQEL
KGLDIVRRDWCDLAKETGNFVIGQILSDQSRDTIVENIQKRLIEIGENVLNGSVPVSQFE
INKALTKDPQDYPDKKSLPHVHVALWMNSQGGRKVKAGDTVSYVICQDGSNLTAGQRAYA
PEQLQKQDNLTIDTQYYLAQQIHPVVARICEPIDGIDAVLIATWLGLDPTQFRVHHYHKD
EENDALLGGPAQLTDEEKYRDCEKFKCPCPTCGTENIYDSVLDGSGTDMEPSLYRCSNID
CKTSPLTFVVQLSNKLIMDMRRCIKKYYEGWLICEEPTCRNRTRRLPLQFSQNGPLCQVC
MKATLRPEYSDKSLYTQLCFYRYIFDADYALEKLITDHEKDKWKKFFTPKVRQDYQKLKN
TAEQFLALSGYSEVNLSKLFADCAVRP
NT seq
4404 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccgtgcacggcgaagactgcgacacggggtcgagcgctgtgtcagattcaggg
agttttgtagcttctcgatccaggcgagaaaagaaatcaaagagggggcagcaggaagct
ctagaaagactgaaaagggctaaagctggtgagaagtataaatatgaagttgaggacttc
acaagtgtttatgaagaagttgatgaagaacagtattcgaagctggttcaggcccgccag
gatgatgactggatcgtggatgatgatggtatcggctatgtggaagatggccgagagatt
tttgatgatgaccttgaagacgatgcccttgattttcatgagaaaggaaaagatgataaa
gcacgtaccaaagacaggaggaatgtaaagaaggctgcggtgacaaaaccaaacaatatc
aagtcaatgttcattgctagtgctgggaagaagactgcagataaagtggtagatttgtcc
aaggatgatctgctaggtgacattctacaagatctgaacactgagaaacctcagataact
ccaccacctgtaatgataccaaagaaaaaaagatccattggagtgtcactgaatcctttc
tctgtgcacacccccaaggtagttccttcaggaaaaacggcttcccctgtcttaaggaag
gagcctccattaacttcagttccccttaaatgtgctgaatttgctggagagccagtgcca
gcgttgtgtgtagatgacaaggaggactcaggagcaatggattttgaagacggtgacttt
gacgagcccatggaggctgaggaagtggatgtggagcctgtggctgtcaagacttggcac
caagagagtgagccagcagagggggtgaagcatgaggcagatcctgggaaagggaccacg
tcctacttgggaagttttctcccagatgtttcttgttgggacattgatcaggaagatgat
agcagtttctcagcccaggaagtccaagtggatgccagtcacctcccactggtaaaagga
acagatgaggagcaagtgtttcagttttattggctggatgcttatgaagatcagtacaat
caaccaggtgtggttttcctgtttggcaaagtttggattgaatccgccaaaacccacgtg
agctgttgtgtcatggtgaaaaacatcgagcgaacactttacttccttccccgagaaatg
aaaattgatcgaagtacaggaaaagaaacagaaactccagtcacaatgaaggatgtttat
gatgaatttgatgagaaaatagcagcaaaatacaaaatcatgaagttcaagtccaagcca
gtggaaaagaactatgcttttgagatacctgatgttccagaaaaatctgagtacttggaa
gttagatactcggctgaaatgccacagcttcctcaggatttgaaaggagaaactttttct
catgtatttgggaccaacacatccagcctggaattgttcttgatgaacagaaagatcaga
ggaccttgttggcttgaagtgaaaaatccacagctcttgaatcagccagtcagttggtgt
aaagttgaggcaatggctctgaaaccagacctggtgaatgtgattaaagatgttggtcct
cctccactcgtggtcatgtctttcagcatgaagacgatgcagaatgcaaagactcatcaa
aatgagattattgctgtggcagctttggtccatcacagctttgcattagataaagcaccc
ccacagcctcccttccagtcacatttctgtgttgtgtctaaaccaaaggactgtattttt
ccatatactttcaaagaagatattaaggaaaagaatgtgaaggttgagattgctgcaaca
gaaagaacattgctaggttttttcctcgccaaagttcacaaaattgatcctgatatcatt
gtgggtcataatatttatggatttgaactggaagtgctcctgcagagaattaatgtgtgc
aaagttcctcattggtccaagataggtcgactgaagcgatccaacatgccaaagcttggg
ggcaggggtggatttggtgaaagaaatgctacctgtggccgaatgatctgtgatgtggag
atttcagcaaaggaattgattcgctgtaaaagctaccatttgtctgaacttgttcaacag
attctgagaaccgaaagatttgaaatcccaatggagaatgtacgaaatatgtacagtgaa
tcttctcatctgttgtacctgttggaacatacctggaaagatgccaggttcattttgcag
atcatgtgtgagctaaatgttcttccattagcattgcagatcactaacatcgctgggaac
attatgtctaggacgctgatgggtggacgatccgagcgtaatgagttcttgttgcttcat
gcattttatgaaaacaactatattgtgcctgacaagcagattttcagaaagcctcagcaa
aaactgggagatgaagatgaagatatagatggagatgccaataaatataagaaaggacgt
aagaaagcagcttatgctggaggcttggtattggaccccaaagctggtttttatgataag
tttattttgctcctggacttcaacagtttgtatccttccatcattcaagaattcaacatt
tgttttacaacagtgcaaagagttgcttcagaggcacagaaaattacagaggacggagaa
caagaacagattcctgagctgccagacccaaacttagaaatgggcattttgcccagagag
atccggaagctggtagagaggagaaaacaagtcaaacaactaatgaaacagcaagactta
aatccagaccttgttcttcagtatgacattcgacagaaggctttgaagctcacagcaaac
agtatgtatggctgcctgggattttcctacagcagattttacgccaaaccactggctgct
ttggtgacatacaaaggaagggagattttgatgcatacaaaggagatggtacagaagatg
aatcttgaagttatttatggagataccgattcaattatgataaacaccaacagcactgat
ctggaagaagtatataaattgggaaacaaggtaaaaagtgaagtgaacaagttgtacaaa
ctgcttgaaatagacattgatggtgttttcaagtctctcctactgctgaagaaaaagaag
tacggcgctctagttgttgagccaacgtcagatgggaattactccaccaaacaggagctg
aaagggttagacatagttagaagagattggtgtgatcttgctaaagagactggaaacttt
gtcattggccagattctttctgatcaaagccgagacactatagtggaaaacattcagaag
aggttaatagaaattggagaaaatgtgctaaatggcagtgtcccagtgagccagtttgaa
attaacaaggcattgacaaaggatccccaggattatcctgataaaaaaagcctacctcat
gtacatgttgccctttggatgaattctcaaggaggcagaaaggtgaaagctggagatacc
gtgtcgtatgtcatctgtcaggatgggtcaaacctcactgcaggtcagagagcctatgca
cctgagcagctacagaaacaggacaatttaactattgacacccagtactacctggctcag
cagatccacccagtcgtggctcggatctgtgagccaatagatggaattgatgctgtcctc
attgcaacatggttaggactcgaccccacccagtttagagttcatcattatcataaggat
gaggagaatgatgccctacttggtggcccagcacagctcactgatgaggagaaatacagg
gactgtgaaaaattcaagtgcccatgccccacatgtggaacagagaatatttacgacagt
gtcttagatggttcgggaactgatatggagcccagcttgtatcgctgtagtaacattgat
tgtaagacttcacctttgacctttgtggtacagctgagcaacaaattgatcatggacatg
agacgttgcattaaaaaatactatgaaggctggttgatttgtgaggagccaacctgtcga
aatcgaactcggcgccttcccctccagttctcccaaaatgggcctctttgccaagtctgc
atgaaagctacacttcggccagagtattctgacaagtccctgtacacccagctgtgcttt
taccggtacatttttgatgcggactatgcactggagaaacttattactgatcatgagaaa
gataagtggaagaagttttttacccccaaagttcgtcaggactaccaaaaactcaagaac
actgcagagcagttcttggccctaagtggctactcggaagtgaacctcagcaaactcttc
gctgactgtgccgtgaggccgtga
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