Neogale vison (American mink): 122896362
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Entry
122896362 CDS
T08764
Symbol
PABPC5
Name
(RefSeq) polyadenylate-binding protein 5
KO
K13126
polyadenylate-binding protein
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03015
mRNA surveillance pathway
nvs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122896362 (PABPC5)
09123 Folding, sorting and degradation
03018 RNA degradation
122896362 (PABPC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvs03019
]
122896362 (PABPC5)
03041 Spliceosome [BR:
nvs03041
]
122896362 (PABPC5)
Messenger RNA biogenesis [BR:
nvs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
122896362 (PABPC5)
mRNA cycle factors
Stress granule specific factors
122896362 (PABPC5)
Spliceosome [BR:
nvs03041
]
Complex C
Other components
Complex C specific factors
122896362 (PABPC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
RRM_MUD2_C
RRM_3
RRM_ACIN1
DUF4523
TC1
Motif
Other DBs
NCBI-GeneID:
122896362
NCBI-ProteinID:
XP_044090424
UniProt:
A0A8C7ERS9
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Position
X:complement(55537907..55541563)
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AA seq
382 aa
AA seq
DB search
MGSGEPNSAGKKKKYLKAALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLG
YGYVNFRFPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNR
ALFYLFSAFGNILSCKVVCDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRF
KFPEERAAEVRTRDRATFTNVFVKNFGDDLDDEQLKEIFSGYGPTESVKVIRDASGKSKG
FGFVRYETHEAAQKAVLDLHGKSINGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPP
GVPIYIKNLDETIDDEKLKEEFSSFGSISRAKVMVEVGQGKGFGVVCFSSFEDATKAVDE
MNGRTVGSKPLHVTLGQARRRW
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggggagtggagagcctaattctgctggcaagaaaaagaagtacctaaaggctgccctg
tacgtgggtgacttggacccagatgtcacggaggatatgctatataaaaagttcaggcct
gctggtcctctgcgcttcacccgaatatgccgtgaccctgtgacccgcagccccctgggc
tatggctatgttaacttccgctttcctgcagatgctgagtgggccctgaatacaatgaat
tttgacttaattaatggcaaacctttccgcctcatgtggtctcagccagatgaccgctta
agaaagtctggagttggaaatatattcatcaaaaacctggataaatccatagacaatagg
gctcttttttatttattttctgcctttgggaacattctctcctgcaaagtcgtatgtgat
gacaatggttctaagggttatgcctatgtgcactttgacagcctggccgctgccaataga
gccatctggcacatgaatggagtgcggcttaacaaccgccaggtgtatgttggcagattc
aaattcccagaagagcgggcagctgaagtcagaaccagggatagagcgactttcaccaat
gtttttgttaaaaacttcggagatgacttggatgacgaacaactgaaggaaatctttagt
ggctatgggccaacggagagtgttaaggttataagagatgccagtgggaaatctaagggc
tttggatttgtgaggtatgagacacacgaggctgcccaaaaggctgtattagacctgcat
ggaaagtccatcaatgggaaagttctgtatgtagggcgggcacagaagaaaattgaacga
ttggctgagttaagacgaagatttgaacgactgagattaaaagaaaaaagtcggcctccg
ggggtgcctatctatattaagaacctggatgagaccatcgatgatgaaaaactgaaggag
gaattttcttcctttggatcaattagccgggccaaagtgatggtggaagtagggcaaggc
aaagggtttggtgttgtctgcttctcctcttttgaagatgctaccaaagcagtggatgag
atgaatggtcgcacagtgggctccaagcccctgcatgttaccctgggccaggccaggcgc
aggtggtga
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