Neogale vison (American mink): 122896421
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Entry
122896421 CDS
T08764
Symbol
NXF5
Name
(RefSeq) nuclear RNA export factor 5
KO
K14284
nuclear RNA export factor
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03008
Ribosome biogenesis in eukaryotes
nvs03013
Nucleocytoplasmic transport
nvs03015
mRNA surveillance pathway
nvs05014
Amyotrophic lateral sclerosis
nvs05164
Influenza A
nvs05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122896421 (NXF5)
03015 mRNA surveillance pathway
122896421 (NXF5)
03008 Ribosome biogenesis in eukaryotes
122896421 (NXF5)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
122896421 (NXF5)
05168 Herpes simplex virus 1 infection
122896421 (NXF5)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
122896421 (NXF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvs03019
]
122896421 (NXF5)
03009 Ribosome biogenesis [BR:
nvs03009
]
122896421 (NXF5)
Messenger RNA biogenesis [BR:
nvs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122896421 (NXF5)
mRNA cycle factors
Stress granule specific factors
122896421 (NXF5)
Ribosome biogenesis [BR:
nvs03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
122896421 (NXF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
LRR_4
UBA_8
Motif
Other DBs
NCBI-GeneID:
122896421
NCBI-ProteinID:
XP_044090547
LinkDB
All DBs
Position
X:46407838..46439813
Genome browser
AA seq
634 aa
AA seq
DB search
MSKRQQQQKYVLPSDKYETYRNEEYNDGDSSPQGRKKIWSSFHGDFVKRNPHYECGGYEP
HPSYLQENDGNVLMRDVQEDPKIRHTPYSTRHNKRRVKWQNEGHIHITVWRDRKNLKREM
GENTQDGNPGKWFKINIPYGRKYDKTWLMNSIQSHCSVPFTPVDFHYVKNQARFFVQDVG
TASALKDVSCKIYDEENRKISIFVNPSSVPYSVRYKLEPEEMEQLKLTMNKRYDVSQQAL
DLQCLRFDPDLVGHDIDIILNRRNCMAATLQIIEENYPELLSLNLSNNKLYGLDGLSDII
EMAPTVKNLNLSKNELNLVWELNKMKGLELEELWLEGNPLCDTFPDESTYISAIKNCFPK
LLRLDGQELSPPVITDTDTPCLLKPCKESYKGSDALKSLVLQFLQQYYFIYDSGDRQGLL
GAYHDEACFSLVIPLNPKDPGPSSLWECFKESRNMKKSKDPSLCVQPLKHTKYDIVGSLC
VLPKTQHDLSSFLVDMWFQTERMLCFTVHGVFKEVEGKSQGSVRAFTRTFITIPASNSSL
CIVNDELFVRDATPSETWNAFSYRDPTLTSSSMPTLSQEQQEMVHAFSTQSGMKLEWSQK
CLQDNEWNYARAGQVFTMLKNEGKIPEEAFKQTT
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaagacagcaacaacaaaaatatgttcttccatcagataaatatgagacatat
agaaatgaagaatacaatgatggtgatagctcacctcaaggaagaaagaaaatttggagt
tcattccacggtgattttgtcaagaggaaccctcattatgaatgtggtggatatgagcct
catccttcatacctccaggagaatgatggaaatgtgttgatgagagatgtccaagaggac
cccaaaataagacacactccctatagcacccggcacaacaagaggagagtgaaatggcaa
aatgaaggccatatccatattactgtgtggagagacagaaaaaatctgaagagagaaatg
ggggagaacacacaagatggaaacccagggaaatggttcaagatcaacattccctatgga
agaaagtatgacaagacatggctaatgaattcaatccagagccattgcagtgtccccttc
actccagtggattttcactacgtgaaaaaccaggctcggttctttgttcaggatgttggc
actgcctctgcactgaaggatgtcagctgcaagatttatgatgaggagaaccgaaagata
tctatctttgtcaatccctcctctgtaccctactctgtgaggtataagttggagccagaa
gaaatggagcagctaaagctgaccatgaacaaacgctatgacgtctcccagcaagctctt
gacctccagtgtctccgctttgacccagacttggtaggccatgatatagatataatcctg
aaccgaagaaactgcatggcagccaccctgcagatcattgaagagaattaccctgagcta
ttgtccttgaacttgagcaacaacaaactgtatgggctagatggcctgtctgacattata
gagatggcccccacagtcaagaatctgaacctctccaaaaatgagctgaacttggtgtgg
gagttaaacaagatgaaaggactggagcttgaagagctttggctagaaggaaaccccttg
tgtgacacctttccagacgagtccacctacataagtgccatcaagaattgctttcctaag
ttgttacgcctggatggccaggagctatcaccaccagttatcactgatactgacacaccc
tgcttgttaaagccctgcaaggaaagctacaaaggatctgatgccctgaagagtctagtc
ctgcaattcctgcagcagtactatttcatctatgattctggagaccgtcagggtctcctc
ggtgcctaccatgatgaggcctgcttctccctggtcattcccttaaaccccaaggaccca
ggcccaagcagtttgtgggagtgcttcaaggaaagcaggaatatgaagaagtccaaggac
ccctccctgtgtgttcagccgctaaagcacacaaaatatgacatcgtgggctccctctgt
gtgctgcccaaaacacagcatgatctcagctccttcttggtggacatgtggttccagacg
gagaggatgctctgtttcactgtccatggggtgttcaaggaagtggagggaaagtctcag
ggttctgttcgtgccttcaccaggacattcatcaccatccctgccagcaattccagtcta
tgcatcgtgaatgatgagctgtttgtgagagatgccacccccagtgagacttggaatgcg
ttttcctaccgagatcctacactgacttccagctccatgcccaccctctcccaggagcag
caggaaatggttcatgctttctccactcagtctgggatgaaactcgagtggtctcagaag
tgccttcaggacaacgagtggaactatgccagagctggtcaggtcttcactatgctcaag
aatgagggcaagatcccagaggaggctttcaagcaaaccacctaa
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