Neogale vison (American mink): 122897437
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Entry
122897437 CDS
T08764
Symbol
HCFC1
Name
(RefSeq) host cell factor 1 isoform X1
KO
K14966
host cell factor 1
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03083
Polycomb repressive complex
nvs04980
Cobalamin transport and metabolism
nvs05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
122897437 (HCFC1)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
122897437 (HCFC1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122897437 (HCFC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nvs01009
]
122897437 (HCFC1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nvs03036
]
122897437 (HCFC1)
03029 Mitochondrial biogenesis [BR:
nvs03029
]
122897437 (HCFC1)
Protein phosphatases and associated proteins [BR:
nvs01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122897437 (HCFC1)
Chromosome and associated proteins [BR:
nvs03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
122897437 (HCFC1)
HMT complexes
COMPASS/SET1 complex
122897437 (HCFC1)
MLL-HCF complex
122897437 (HCFC1)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
122897437 (HCFC1)
Mitochondrial biogenesis [BR:
nvs03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
122897437 (HCFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
Kelch_2
fn3
YqgF
Motif
Other DBs
NCBI-GeneID:
122897437
NCBI-ProteinID:
XP_044091614
LinkDB
All DBs
Position
X:1497225..1520334
Genome browser
AA seq
2081 aa
AA seq
DB search
MASAVSPANSPAVLLQPRWKRVVGWSGPVPRPRHGHRAVAIKELIVVFGGGNEGIVDELH
VYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEW
KRLKAKTPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYILELRP
GSGVVAWDIPITYGVLPPPRESHTAVVYTEKDNKKSKLVIYGGMSGCRLGDLWTLDIDTL
TWNKPSLSGVAPLPRSLHSATTIGNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACLN
LDTMAWETILMDTLEDNIPRARAGHCAVAINTRLYIWSGRDGYRKAWNNQVCCKDLWYLE
TEKPPPPARVQLVRANTNSLEVSWGAVATADSYLLQLQKYDIPATAATATSPTPNPVPSV
PANPPKSPAPAAAAPAVQPLTQVGITLLPQAASAPPTTTTIQVLPTVPGSSISVPAAART
PGVPAVLKVTGPQATTGTPLVTMRPASQAGKAPVTVTSLPAGVRMVVPTQSAQGTVIGSS
PQMSGMAALAAAAAATQKIPPSSAPTVLSVPAGTTIVKTVAVTPGTTTLPATVKVASSPV
MVSNPATRMLKTAAAQVGTSVSSAANTSTRPIITVHKSGTVTVAQQAQVVTTVVGGVTKT
ITLVKSPISVPGGSALISNLGKVMSVVQTKPVQTSAVTGQASTGPVTQIIQTKGPLPAGT
ILKLVTSADGKPTTIITTTQASGAGTKPTILGISSVSPSTTKPGTTTIIKTIPMSAIITQ
AGATGVTSSPGIKSPITIITTKVMTSGTGAPAKIITAVPKIATGHGQQGVTQVVLKGAPG
QPGTILRTVPMGGVRLVTPVTVSAVKPAVTTLVVKGTTGVTTLGTVTGTVSTSLAGAGGH
STSASLATPITTLGTIATLSSQVINPTAITVSAAQTTLTAAGGLSTPTITMQPVSQPTQV
TLITAPSGVEAQPVHDLPVSILASPTTEQPTATVTIADSGQGEVQPGTVTLVCSNPPCET
HETGTTNTATTTVVANLGGQPQPAHVQFVCDRQEAAASLVTSTVGPQNGSVVRVCSNPPC
ETHETGTTNTATTATSNMAGPHSCSNPPCETHETGTTSTATTAMSGIGAGPQRDVRRVCT
AGTAPAVLRVGVAAGASEGAQMSAKPLCQTRQTSVTSATMTVMATGAAPCSAFVQLAPVS
GQVRASILGSKDSPVAGLSPLVSVGRQLEAHHTHTTNTPTTVRSAMGAGEPGEARGTPMP
AYESSPGATATVTVPALEALLCPSAAVTQVCSNPPCETHETGTTNTATTSNAGSAQRVCS
NPPCETHETGTTHTPTTATSGGSAGQPEGGQQPPAGRPCETHQTTSTGTTMSVGVGALLP
DAVPSHRTLESGLEVAAPAAVAAQAAASLLAPFPTQRVCSNPPCETHETGTTHTATTVTS
NMSSSQDPPPAASDQGEVESTQGDSVNITSSSAVTTTVSSTLTRAVTTVTQSTPVPGPSV
PKISSVTEATPGALTTEVPIPATITVTIANTETSDMPFSAVDILQPPEELQASPGPRQQL
PPRQLLQPTSTPLLGESAEVLSASQTPELQAAVDLSSTGDPSPGQEPASSAVVATVVVQP
PPPTQSDVDQLALPQELMAEAQAGTTTLMVTGLTPEELAVTAAAEAAAQAAATEEAQALA
IQAVLQAAQQAVMAGTGEPMDTSEAAAAVTQAELGHLSAEGQEGQAATIPIVLTQQELAA
LVQQQQLQEAQAQQQQHLPTEALAPADSLNDPAIEGNCLNELAAAVPSTVALLPPTATES
LAPSNTFVAPQPVVVASPAKLQAAATLTEVANGIESLGVKPDLPPPPSKAPVKKENQWFD
VGVIKGTNVMVTHYFLPPDDAIPSDDDSGAVPDYNQLKKQELQPGTAYKFRVAGINACGR
GPFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQSSQA
GGEPKSSTPAQLAFMRVYCGPSPSCLVQSSSLSNAHIDYTTKPAIIFRIAARNEKGYGPA
TQVRWLQETSKDSSGAKPASKRPMSSPEMKSAPKKSKADGQ
NT seq
6246 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggccgtgtcgcccgccaactcgccagcggtgcttctgcagccccgctggaag
cgagtggtgggctggtcgggtccagtgccccggccccgccacggccaccgagccgtggcc
atcaaggaactcatcgtggtgtttggcggcggcaacgaggggatagtggacgaactgcac
gtgtacaacacggcgactaaccagtggttcatcccagccgtgagaggggacattcccccc
gggtgcgcggcctacggcttcgtgtgcgacgggacgcgcctgctggtgttcggcgggatg
gtggagtacgggaagtacagcaacgacctctacgagctccaggcaagccgatgggaatgg
aagcgactcaaagcaaagacgcccaaaaacgggccgcccccgtgtcctcggcttgggcac
agcttctcccttgtgggcaacaagtgctacttgtttgggggcctggccaatgacagcgag
gaccccaagaacaacattccgaggtacctgaacgacttgtatatcctggaactgcggccg
ggctccggcgtggtggcctgggacatccccatcacgtatggtgtcctgcctcccccccgg
gagtcacacactgctgtggtctacactgagaaggacaataagaagtccaagctggtgatc
tacggagggatgagcggctgcagactgggggacctctggaccctggacatcgacactctc
acgtggaacaagcccagtctcagtggggtggcccctctccctcggagccttcactcagcc
acgaccatcggaaacaaaatgtacgtgtttggtggctgggtgcctctcgtcatggatgac
gtcaaagtggccacacacgagaaggagtggaagtgtaccaacacactggcttgcctcaac
ctggataccatggcctgggagaccatcctgatggacacgctggaggacaatatccctcgg
gcccgagctggccactgtgccgtggccatcaacacccgcctgtacatatggagtgggcgc
gatggctaccgaaaggcctggaacaaccaggtctgctgtaaggacctctggtacctggag
acagaaaagccaccgcccccggcccgggtacagctggtacgagccaacacgaactccctg
gaggtgagctggggggcagtggcgacagccgacagttaccttctgcagctccagaaatat
gacattcctgccacggctgctaccgccacctcccccacacccaatccagtcccgtctgtg
cctgccaaccctcccaagagccctgcccccgcagcagccgcacctgccgtgcagccgctg
acccaagtaggcatcacgctcctgccccaggctgccagcgcgcccccgaccaccaccacc
atccaggtcttgccgacggtgcctggcagctccatctccgtgcccgccgcagccaggact
ccaggtgtgcctgctgttctcaaagtcaccggtcctcaggcgacaacaggaaccccattg
gtcaccatgcgacctgccagccaggctgggaaagcccccgtcaccgtgacctcccttccc
gcaggcgtgcgaatggttgtgccaacacagagtgcccagggaacggtgatcggcagcagc
ccccagatgagcggcatggctgcgctggcggccgccgctgccgctacacagaagatccct
ccttcctcggcgcccacggtgctgagcgtcccggcaggcaccaccatcgtcaagaccgtg
gccgtgacccctggcaccaccaccctcccggcaactgtaaaggtggcctcctcgccggtc
atggtgagcaaccccgccacccggatgctgaagactgcagctgcccaggtcgggacgtcg
gtctcctccgctgccaacacatccacccgccccatcatcacggtccacaagtccgggact
gtgacagtggcccagcaagcccaggtggtgaccaccgtggtgggtggagtcaccaagacc
atcaccctggtgaagagccccatctccgtcccgggaggcagcgctctgatttccaacctg
ggcaaagtgatgtcagtggttcagaccaaaccggttcagacctcggcagtcacgggccag
gcatctacgggcccagtgactcagatcatccagaccaaagggccgctgccggccgggacc
atcctgaagctggtgacctcagccgacggcaagcccaccaccatcatcactaccacgcag
gccagcggggcggggactaagcccaccatcctgggcatcagcagcgtgtccccaagcacc
accaagcctggcacgaccaccatcatcaagaccatccccatgtcggccattatcacgcag
gctggcgccacaggtgtgaccagcagtcctggcatcaagtcccctatcaccatcatcacc
accaaagtgatgacttcaggaactggagcgccggccaaaatcatcaccgctgtccctaag
atcgccactgggcacgggcagcaaggagtgactcaggtggtgctgaagggggcccctgga
cagccaggcaccatcctccgcaccgtgcccatggggggtgtccgcctggtcactccggtc
actgtctctgccgtcaagccagctgtcaccacgttggttgtgaagggcaccacaggcgtc
acaaccctcggcacagtgacaggcaccgtttccactagccttgccggagccggaggccac
agtaccagcgcctccctggccacacctatcaccacgttgggcaccatcgccaccctctca
agccaagtgatcaaccccactgccatcaccgtgtcggcagctcagaccacgctgacggcg
gccggtgggctcagcacccccaccatcaccatgcagcctgtctcccagccgacccaggtg
actctcatcacggcacccagtggtgtcgaggctcagcctgtgcacgacctgcctgtgtcc
attctagcctcacctactacagaacagcccacggccacggtcaccatcgccgactcgggc
cagggagaggtacagccaggcaccgtgaccctggtgtgctcgaacccgccctgcgagacg
cacgagacgggcaccactaacacggccaccaccactgtcgtagctaacctcggggggcag
cctcagcccgcccacgtgcagttcgtctgtgacagacaggaggcagctgcttccctcgtg
acctcgacggtcgggccacagaacggcagcgtggtccgcgtctgctccaacccaccgtgt
gagacgcacgagacgggcaccactaacacagccaccactgctacgtccaacatggccggg
ccgcacagctgctccaacccgccctgcgagacgcacgagaccggcaccaccagcaccgcc
accaccgccatgtccggcatcggcgccggcccgcagcgggacgtgcggcgtgtctgcacg
gccggcaccgcgcccgctgtgctgcgggttggcgtggctgctggggcgtcagagggagcc
cagatgtccgccaagcccttgtgccaaacccgccagaccagcgtgaccagcgccaccatg
actgtgatggccactggcgcggccccgtgctcagctttcgtgcagctggcccctgtgagc
ggccaggtccgagccagcatccttggaagcaaggacagtcccgtggctggcctgagtccc
ctggtgtccgtgggccgccagctggaggcccaccacacgcacacgaccaacacacccacc
acggtccgctctgccatgggggccggggagcctggcgaggcccgggggacccccatgccc
gcgtacgagagctcaccaggcgccaccgccaccgtgactgtgccggccctggaggcgctg
ctgtgcccttcagccgccgtgacccaagtctgctccaacccgccctgcgagacccacgag
acgggcaccaccaacaccgccactacctcgaacgcaggcagcgcccagcgggtctgctcc
aacccgccttgcgagacccacgagacgggcaccacgcacacacccaccaccgccacctcc
ggtgggagtgcgggccagcctgagggcggacagcagccccctgccggccgcccctgcgag
acgcaccagaccacctccacgggcaccaccatgtcagtcggcgtgggcgccctgctcccc
gatgccgttccctcccataggaccctagagtccggcttggaggtggcagccccggccgcc
gtcgccgcccaggctgctgcttcgttgctggctccgttcccgacacagagggtttgctcc
aacccgccttgtgagacccacgagaccggcaccacgcacacagccaccaccgtcacctcc
aacatgagctccagccaagatcccccaccagccgccagtgaccagggagaggtggagagc
acccagggtgacagtgtgaacatcaccagctccagtgccgttacaacgaccgtgtcctcc
accctgacacgggctgtgaccactgtaacacagtccacgcccgtcccaggcccctcggtg
ccgaagatctcatcagtgactgaggctaccccaggggctctgaccaccgaagtccccatc
ccagccacgataacagtgaccatagccaacacagaaacttctgacatgcccttctctgct
gttgacatcctgcagcccccagaggaactccaggcctcgccagggcctcgccagcagctg
ccgccacggcaactcttgcagcccacctctacacccctgctgggggagtccgccgaggtc
ctgtcagcctcccagacccctgagctccaggccgccgtggatctgagcagtacaggggac
ccgtctccgggccaggagcctgccagctcagccgtggtggccacggtggtggtccagccg
cccccgcccacacagtctgacgtagaccagttggccctcccccaagagctgatggccgag
gcccaggcgggcaccaccaccctcatggtgacggggctcacccccgaggagctggcagtc
actgctgccgctgaagcggctgcccaggccgcagccacggaggaggcccaggccctggcc
atccaggcagtgctccaggccgcgcagcaggccgtcatggcaggcaccggggagcccatg
gacacatctgaggcggcggcggctgtgacgcaggcggagctgggccacctgtcggccgag
ggccaggagggccaggccgccaccatccccatcgtgctgacgcagcaggagctggcggcg
ctcgtgcagcagcagcagctacaggaggcgcaggcgcagcagcagcagcacctccccacc
gaggccttggcccccgccgacagcctcaacgacccagccatcgagggcaactgcctcaac
gagctggccgcggccgtgcccagcaccgtggccctgctgccccccacggccaccgagagc
ctggctccgtccaacacgtttgtggctccgcagccggtggtggtggccagccccgccaag
ctgcaggccgcggccaccttgacggaagtggccaatggcatcgagtccctgggtgtgaag
ccagacttgccgcccccacccagcaaggcgcctgtgaagaaggagaaccagtggtttgat
gtgggggtcattaagggcaccaatgtaatggtgacacactattttctgccaccagatgac
gctatcccttctgacgacgactcgggcgctgtccccgactacaaccagctgaagaagcag
gagctgcagccaggcacagcctacaagttccgcgtggccgggatcaatgcctgcggccgg
ggacccttcagcgagatctcggcctttaagacgtgtctgcctggttttccgggggccccc
tgtgccattaaaatcagcaaaagtccagatggtgcgcacctgacctgggagccgccgtct
gtgacctccggcaagatcatcgagtactcggtgtacctggccatccagagctcgcaggcc
ggtggcgagcccaagagttccacgccggcccagctggccttcatgcgggtgtactgcggg
cccagcccgtcctgcctggtgcagtcgtccagcctctccaacgcccacatcgactacacc
accaagcccgccatcatcttccgcatcgctgcccgcaacgagaagggctatggcccagcc
acccaagtgaggtggttgcaagaaaccagtaaagacagctctggcgccaagccagccagc
aagcggcccatgtcctctccggaaatgaaatccgctccaaagaaatctaaggcagatggt
cagtga
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integrated database retrieval system
