Neogale vison (American mink): 122899376
Help
Entry
122899376 CDS
T08764
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nvs03036
]
122899376 (CHD5)
Chromosome and associated proteins [BR:
nvs03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122899376 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
HDA2-3
ResIII
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
122899376
NCBI-ProteinID:
XP_044092945
LinkDB
All DBs
Position
2:complement(3828823..3884640)
Genome browser
AA seq
1948 aa
AA seq
DB search
MRGPLGTEEELPRLFADEMENEDEMSEEEDGGLGGFDDYFPEEPVGLPKKKKSKKLKENR
SKGKRKKKEGSNDELSENEEDLEEKSESEGSDYSPNKKKKKKLKDKKEKKAKRKRKDDDE
DDNDDGCLKEPKSSGQLMAEWGLDDVEYLFSEADYRTLTNYKAFSQFLRPLIAKKNPKIP
MSKMMTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVAIAPPLAVSPQQAPQPVPIR
KAKTKEGKGPGVRKKIKGSKDAKKKGKGRKVAGLKFRFGGISNKRKKGSSSEEDEREESD
FDSASIHSSSVRSEGAAALGKKSKRRRKKRRIDDGDGYETDHQDYCEVCQQGGEIILCDT
CPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKDDDDDEEEGGCEEEEDDHMEFCR
VCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWRWTEP
PAPFMVGLPGPDVEPGVPPPKPLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYR
NYQRKNDMDEPPPFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMIHRILNH
SFDKKGDVHYLIKWKDLPYDQCTWEIDDIDIPYYDNLKQAYWGHRELMLGEDARLPKRLV
KKGKKLKDDKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTD
TILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTY
TGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIE
WACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNN
LEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYY
KFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLV
KSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQ
EAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQN
KKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEEL
FKDDVEGMMSQGQRPVTPIPDVQSSKGGALAASAKKKHGSTPPGDNKDVEDSSVIHYDDA
AISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYW
EKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDED
EDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWG
MPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHV
LTRIGVMSLVRKKVQEFEHVNGKYSTPDLIPEGPEGKKPSEVISSDPNTPVPASPAHLLP
ALGLPDKMEAQLGYMDEKELGVQKPKKPPEIQALPASLDRVEVEDKHEGSDGKERLEETE
KAPPSPEQLPKEEVLPEKEKILDKLELSLIHSRGDGNDFKPEDTKVEEKEPLETQQNGDK
EEDEEGKKDDKNGKFKFMFNIADGGFTELHTLWQNEERAAVSSGKIYDIWHRRHDYWLLA
GIVTHGYARWQDIQNDPRYMILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQALVIEEQL
RRAAYLNMTQDPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEE
LLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTNRAGDPTIQQGAFGNSQMYNNN
FGPNFRGPGPGGIVNYNQMPLGPYVTDI
NT seq
5847 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcccgctgggcaccgaggaggagctgccgcggctgttcgcggacgagatggag
aacgaggacgagatgtcagaggaagaagatggtggccttggaggctttgacgactacttc
cctgaggagcccgtaggccttcccaagaagaagaaatccaagaagctcaaggagaaccgg
tccaaagggaaacggaagaagaaagaggggagcaatgatgagctctcagaaaacgaagag
gatctggaagagaagtcagagagtgagggcagcgactactcccctaataaaaagaagaag
aaaaagctcaaggacaagaaggagaaaaaagccaagcgaaaaaggaaggatgatgatgag
gacgataatgacgacgggtgtctgaaggagcccaagtcctcggggcagctgatggccgag
tggggcctggatgacgtggagtacctgttctcggaggccgactaccgcacgctgaccaac
tacaaggccttcagccagttcctcaggcccctcatcgccaagaagaacccgaagatcccc
atgtccaaaatgatgacggtgctgggggccaagtggcgggagttcagcgccaacaaccct
ttcaaggggagctcggcagcggcagctgcggcagccgtggccgcggccgtggagacagtc
gccatcgcccctccactggctgtcagtccccagcaggccccccagcctgtacctatccgc
aaggccaagaccaaggagggcaaggggccaggagtgaggaagaagatcaaaggctccaag
gatgccaagaaaaagggcaaggggagaaaggtggccgggctcaagttccgctttggaggg
atcagcaacaagaggaagaaaggctcctcgagcgaggaggacgagcgggaggagtcggac
ttcgacagcgccagcatccacagctcctccgtgcgctccgagggcgccgccgccctgggg
aagaagagcaagaggcgtcgcaagaagaggaggattgacgacggggatggctacgagact
gaccaccaggactactgcgaggtgtgccagcagggcggggagatcatcctgtgtgacacc
tgtccgcgagcctaccacctcgtctgccttgacccagagctggagaaggctccggagggc
aagtggagctgtccccactgtgagaaggaggggatccagtgggagccgaaggacgacgac
gacgacgaggaggagggcggctgcgaggaggaggaggacgaccacatggagttctgccgc
gtgtgcaaggacggcggcgagctgctctgctgcgacgcgtgcccctcctcctaccacctg
cactgcctcaacccgccgctgcccgagatcccaaacggtgaatggctctgcccgcgctgt
acttgcccccctctgaagggcaaagtccagcggatcctacactggaggtggacggagccc
cctgcccccttcatggtggggctgccggggcccgacgtggagcccggtgtccccccaccc
aagcccctggagggcattccggagagagagttctttgtcaagtgggcggggctctcctac
tggcactgctcctgggtgaaggagctacagctggagctctaccacacggtgatgtatcgc
aactaccaaagaaagaacgacatggacgagccgccgccctttgactacggctccggcgat
gaggacggcaagagcgagaaaaggaagaacaaggaccctctctacgccaagatggaggag
cgcttctaccgctacggcatcaagcctgagtggatgatgatccaccgtatcctgaaccac
agcttcgacaagaagggggacgtgcactacctgatcaagtggaaagacctgccctatgac
cagtgcacctgggaaatcgacgacatcgacatcccgtactatgacaacctgaagcaggcc
tactggggccacagggagctgatgctgggtgaagacgccaggctccccaagagactggtc
aagaagggcaagaagctgaaggacgataagcaggagaagccgccggacacacccattgtg
gatcccacggtcaagttcgacaagcagccttggtacatcgactccacgggcggcacgctg
cacccgtaccagctggagggcctcaactggctgcgcttctcctgggcccagggcacggac
accatcctggctgacgagatgggtttgggcaagaccgtgcagaccatcgtcttcctctac
tccctgtacaaggaggggcactccaagggaccctacctggtcagtgcacccttgtccacc
atcatcaactgggaacgtgagtttgagatgtgggcacccgacttctatgtggtcacctac
acgggggacaaggagagccgctccgtaatccgggagaatgagttttcttttgaggacaat
gccattcggagcgggaagaaggtgttccgtatgaagaaagaagtgcagatcaaattccat
gtcctgctcacctcctacgagctcatcaccatcgaccaggccatcctgggctccatcgag
tgggcctgcctcgtggtggacgaggcccatcggctgaagaacaaccagtccaagttcttc
agggtcttgaacagctacaagatcgactacaagctgctgctgacggggaccccccttcag
aacaacctggaggagctcttccacctcctcaacttcctgactccggagcggttcaacaat
ctggagggcttcctggaggaattcgccgatatctccaaggaagaccagatcaagaagctc
cacgacctgctggggccgcacatgctgaggcggctcaaggctgacgtgttcaagaacatg
ccagccaagaccgagctgatcgttcgtgtggagctgagccagatgcagaagaaatactac
aagttcatcctcacgcggaacttcgaagcgctcaactccaagggcgggggcaaccaggtg
tcgctgctcaacatcatgatggatctgaagaagtgttgcaaccacccctacctcttcccc
gtggccgccgtggaggcccccgtcttgcccaacggctcctacgacggcagctcgctggtc
aagtcctcgggcaagctcatgctgctgcagaagatgctgaagaagctgcgggacgaaggg
caccgtgtgctcatcttctcccagatgaccaagatgctggaccttctggaggacttcctg
gagtacgagggctacaagtatgaacgcattgatggtggcatcactggaggcctccgacaa
gaggccatcgacagattcaacgcccctggggcacagcagttctgcttccttctctcgacc
cgagcggggggcctgggcatcaacctggccacagcagacaccgtcatcatctacgactcg
gactggaatccacacaatgacatccaggccttcagccgcgcccaccgcatcgggcagaac
aagaaggtgatgatctaccgctttgtgacgcgggcctcggtggaggagcgcatcacgcag
gtggccaagcggaagatgatgctgacccacctggtggtgcggcccggcctcggctccaag
tccggctccatgaccaagcaggagctggacgacatcctcaagttcggcaccgaggagctc
ttcaaggacgacgtggagggcatgatgtctcagggccagaggcctgtcacgcccatccca
gatgtccagtcctccaaagggggagccttggctgccagcgccaagaagaaacacggcagc
accccgccaggcgacaacaaggacgtggaggacagcagcgtgatccactacgacgacgcg
gccatctccaagctgctggaccggaaccaggacgccacggacgacacggagctgcagaat
atgaacgagtacctgagctccttcaaggtggcgcagtacgtggtgcgggaggaggacggc
gtggaggaggtggagcgtgagatcatcaagcaggaggagaacgtggaccccgactactgg
gagaagctgctgcggcaccattatgagcagcagcaggaggacctggcccgcaacctgggc
aagggcaagcgcatccgcaagcaggtcaactacaacgacgcctcccaagaggaccaggag
tggcaggacgagctctcggataaccagtctgaatattccattggctccgaggatgaggac
gaggactttgaggaaaggccggaagggcagagtggacggcgacaatcccggaggcagctg
aagagcgacagggacaagcccctgccacctcttctcgcccgtgtgggtggaaatatcgag
gtgttgggcttcaacgcccggcagcggaaggcctttctgaacgccatcatgcgctggggt
atgccgccccaggacgccttcaactcccactggctggtgcgggacctacgtgggaagagc
gagaaggaatttagagcctatgtgtccctcttcatgcggcacctgtgtgagccgggggcg
gacggcgcagagaccttcgcggatggcgtgccccgtgagggcctctcgaggcagcacgtg
ctcacccgcatcggggtcatgtctctagttaggaagaaggttcaggagtttgagcacgtt
aacgggaagtacagcaccccggacttgatccccgaagggcccgagggcaagaagccaagc
gaggtcatctcctcggaccccaacacgcccgtgcccgccagccctgcccacctcctcccg
gcactgggcctgccagacaaaatggaagcccagctgggctacatggacgagaaggagctg
ggggttcagaagccaaagaagcccccagaaatccaggccctgccggcttccctggacaga
gtggaggtggaggacaagcatgagggctcggatggcaaggagcggctggaggagacggaa
aaggccccgccgtccccagagcagctgccaaaagaagaagtgcttcccgagaaggagaaa
attctggacaagctggagctaagcttgattcacagcagaggggatggcaacgatttcaag
ccagaggacaccaaagtggaggagaaggagccccttgaaacacagcaaaatggtgacaaa
gaggaagatgaggaggggaagaaggatgacaagaatgggaagttcaagttcatgttcaac
attgcagacgggggcttcacagaattgcacacactgtggcagaatgaggaacgtgccgcc
gtgtcctcggggaaaatctacgacatctggcaccggcgccatgactactggctgctggcg
ggcatcgtgacgcacggctatgcccgctggcaggacatccagaatgacccgagatacatg
atcctcaatgagcccttcaagtccgagatccacaagggcaactacttggagatgaagaac
aagtttctggcccgcaggttcaagctgctggagcaggctttggtcatcgaggagcagctc
cggagggctgcataccttaacatgacccaggaccccaaccaccccgccatggccctcaat
gcccgcctggccgaggtggagtgccttgccgagagccaccagcacctgtccaaggagtcc
cttgccgggaacaagccagccaacgccgtcctgcacaaggtcctgaaccagctggaggag
ctgctgagcgacatgaaggccgacgtgacgcgcctgccctccatgctgtcccgcatcccc
cccgtggccgcccgcctccagatgtcggagcgcagcatcctgagccgcctgaccaaccgg
gccggcgaccccaccatccagcagggcgctttcggcaactcccagatgtacaacaacaac
tttgggcccaacttccggggccccggaccgggagggattgtcaactacaaccagatgccc
ctggggccctatgtgaccgatatctag
DBGET
integrated database retrieval system
