Neogale vison (American mink): 122899670
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Entry
122899670 CDS
T08764
Symbol
PUM1
Name
(RefSeq) pumilio homolog 1 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
nvs
Neogale vison (American mink)
Pathway
nvs05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
122899670 (PUM1)
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Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
DUF6922
Motif
Other DBs
NCBI-GeneID:
122899670
NCBI-ProteinID:
XP_044093565
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Position
2:complement(23231432..23366988)
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AA seq
1189 aa
AA seq
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MSVACVLKRKAVLWQDSFSPHLKHHPQEPANPNMPVVLTSGTGSQAQPQPAANQALAAGT
HSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYNNSKHRWPTGDNIHAEH
QVRSMDELNHDFQALALEGRAMGEQLLPGKKFWETDESSKDGPKGIFLGDQWRDSAWGTS
DHSVSQPIMVQRRPGQSFHVNSEVNSVLSPRSESGGLGVSMVEYVLSSSPGDSCLRKGGF
GPRDADSDENDKSDKKNKGAFDGDKLGDLKEEGDVMDKTNGLPVQNGIDADVKDFSRTPG
NCQNSANEVDLLGPNQNGSEGLAQLTSTNGAKPVEDFSNMESQSVPLDPMEHVGMEPLQF
DYSGTQVPVDSAAATVGLFDYNSQQQLFQRPNALAVQQLTAAQQQQYALAAAHQPHIAGL
APAAFVPNPYIISAAPPGTDPYTAGLAAAATLGPAVVPHQYYGVTPWGVYPASLFQQQAA
AAAAATNSANQQTTPQAQQGQQQVLRGGASQRPLTPNQNQQGQQTDPLVAAAAVNSALAF
GQGLAAGMPGYPVLAPAAYYDQTGALVVNAGARNGLGAPVRLVAPAPVIISSSAAQAAVA
AAAASANGAAGGLAGTTNGPFRPLGTQQPQPQPQQQPSNSLASSSFYGNNSLSSNSQSSS
LFSQGSAQPANTSLGFGSSSSLGATLGSALGGFGTAVANSNTGSGSRRDSLTGSSDLYKR
TSSSLTPIGHSFYNGLSFSSSPGPVGMPLPSQGPGHSQTPPPSLSSHGSSSSLNLGGLTN
GSGRYISAAPGAEAKYRSASSASSLFSPSSTLFASSRLRYGMSDVMPSGRSRLLEDFRNN
RYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGN
YVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVREL
DGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHC
LPEQTLPVLEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKF
ASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQR
KIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVDLGPICGPPNGII
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttgcatgtgtcttgaagagaaaagcagtgctttggcaggactctttcagcccc
cacctgaaacatcaccctcaggaaccagctaatcccaacatgcctgttgttttgacatct
ggaacagggtcgcaagcgcagccacaaccagctgcaaatcaggctcttgcagctgggaca
cactcgagccctgtcccaggatcgataggcgttgcaggccgttcccaagacgacgctatg
gtggactacttctttcagaggcagcatggtgagcagcttgggggaggaggcagtggtgga
ggcggctataataatagcaaacatcgatggcctactggggataacattcatgcagaacat
caggtacgttctatggatgaactgaatcatgattttcaagcacttgctctggagggaaga
gcgatgggagagcagctcttgccaggtaaaaagttttgggaaacagatgaatccagcaaa
gatggaccaaaaggaatattcctgggtgatcaatggcgagacagtgcctggggaacatca
gatcattcagtttcccagccaatcatggtgcagagaagacctggtcagagtttccatgtg
aacagtgaggtcaattctgtactgtccccacggtcggagagtgggggactaggcgttagc
atggtggagtatgtgttgagctcatccccgggcgattcctgtctaagaaaaggaggattt
ggcccaagggatgcagacagtgatgaaaacgacaaaagtgacaagaagaacaagggtgcg
tttgatggagataagctaggagatttgaaggaggagggtgatgtgatggacaagaccaat
ggtttgccagtgcagaatgggattgatgcagacgtcaaagattttagccgtacccctggt
aattgccagaactctgctaatgaagtggatcttctgggtccaaaccagaatggttctgag
ggcttagcccagctgaccagcaccaatggtgccaagcctgtggaggatttctccaacatg
gagtcccagagtgtccccttggaccccatggaacatgtgggcatggagcctcttcagttt
gattattcaggcacgcaggtacctgtggactcagcagcagcaactgtgggactttttgac
tacaattctcaacaacagctgttccaaagacccaacgcgctcgccgtccagcagctgacc
gcagctcagcagcagcagtacgcactggcggcggctcatcagccccatattgcaggttta
gcgcccgctgcctttgtccccaatccatacatcatcagcgctgctcccccggggacggac
ccctacacagctggactggcggcagctgcaacactaggtccggctgtggtccctcaccag
tattacggagtcactccctggggagtctaccctgccagtcttttccagcagcaagcggct
gccgcagcggcagcaactaattctgcaaatcagcagactaccccacaggctcagcaaggg
cagcagcaggttctccgtggaggagccagccagcgtcctttgaccccaaatcagaaccag
cagggacagcaaacagatccactagtggcagctgcagcagtgaattctgcccttgctttt
ggacaaggactggctgcaggcatgccaggttaccccgtcttggctcctgctgcttactat
gaccaaaccggtgcccttgtggtgaacgctggagcaagaaatggtcttggagctcctgtt
cggcttgtagctcccgccccagtcatcatcagttcctcggctgcacaagcagctgttgcg
gcggccgcagcttcagcaaatggagcagctggtggtcttgctggaacaacaaatggacca
tttcgccctttaggaacccagcagccccagccccagcctcagcagcagcccagtaacagc
ctggcatccagctctttctatggcaacaactctctgagcagcaattcacagagcagctcc
ctcttctcccagggctctgcccagcctgccaacacatccttgggattcggaagtagcagt
tctctcggcgccaccctgggatcagcccttggagggtttggaacagcagttgcaaactcc
aacactggcagtggctcccgccgtgactccctgactggcagcagtgacctttataagagg
acatcgagcagcttgacccccattggacacagtttttataacggccttagcttttcctcc
tctcctggacccgtgggcatgcctctccctagtcagggaccaggacattcacagacacca
cctccttccctctcttcacatggatcctcttcaagcttaaacctgggaggcctcaccaac
ggcagtgggagatacatctctgccgcgccaggcgctgaagccaagtaccgcagcgcgagc
agtgcctccagcctcttcagccccagcagcactctgtttgcgtcctcccggctgcggtac
ggaatgtctgatgtcatgccctccggcaggagcagacttctggaggatttccgaaataac
cggtaccccaatttacaactacgggagatcgctgggcatataatggagttttcccaagac
cagcatgggtccagattcattcagctgaaactagaacgagccacaccagctgaacgccag
cttgtcttcaatgaaatcctccaggccgcttaccagctaatggtggatgtatttggaaat
tacgtcattcagaagttctttgaatttggcagccttgaacagaagctggctttggcagaa
cgcattcgaggccacgtcctgtcactggcactgcagatgtatggctgccgtgttatccag
aaagctcttgaatttattccctcagaccagcaggtaattaacgagatggttcgggagcta
gatggccacgtcctgaagtgtgtgaaagaccagaatggtaatcatgtggttcagaaatgc
atcgaatgtgtgcagccccagtctttgcagtttatcattgatgcatttaaggggcaggta
tttgctttgtccacgcacccttacggctgccgagtgattcagaggatcctggagcactgt
ctccctgagcagacactccctgtcttagaggagcttcaccagcacacagagcagcttgtg
caggatcaatatggaaattacgtaatccagcatgtattggagcatggtcgtcctgaagat
aaaagtaaaattgtagcagaaatccgaggcaatgtacttgtattgagtcaacacaaattt
gcaagcaatgttgtggagaagtgtgtcactcatgcctcccgtacggagcgcgctgtgctt
atcgatgaggtatgcaccatgaatgacggtccccacagtgccttatacaccatgatgaag
gaccagtatgccaactacgtggtccagaagatgatcgatgtggccgagccagcccagcgg
aagattgtcatgcataagatccggccccacatcgccacgctgcgcaagtacacctacggc
aagcacatcctggccaagctggagaagtactacatgaagaatggcgttgacttagggccc
atctgcggcccccctaatggtattatctga
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