Neogale vison (American mink): 122900160
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Entry
122900160 CDS
T08764
Symbol
NHLRC1
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
nvs
Neogale vison (American mink)
Pathway
nvs04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122900160 (NHLRC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nvs04121
]
122900160 (NHLRC1)
Enzymes [BR:
nvs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122900160 (NHLRC1)
Ubiquitin system [BR:
nvs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122900160 (NHLRC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_2
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_3
Baculo_IE-1
Prok-RING_4
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
122900160
NCBI-ProteinID:
XP_044094571
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All DBs
Position
1:complement(140343360..140344745)
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AA seq
395 aa
AA seq
DB search
MGAEASGSGPALQELVREAEISLLECKVCFERFGHRQQRRPRNLPCGHVVCLACVAALAH
PRTLALECPFCRRACRGCDTSDCLPVLHLLELLGSTLRPGPAAPRAAPCAPGALTCHRAF
GGWGTLVNPTGLALCPKTGRVVVVHDGRRRVKIFDSGGGCAHQFGEKGEAAQDVRYPLDV
TVTNDCHVVVTDAGDRSIKVFDFFGQIKLVIAGQFSLPWGVETTPQNGVVVTDAEAGSLH
LLEVDFPEGVLQRTERLQVHLCSPRGVAVSWLTGAIAVLEHPLGLGSAVGSTTVKVFSPT
MQLISQVDSFGLSLFFPSRITASAVTFDHQGNVIVADTSGQAVLCLGKPEEFPVLKPIIT
HGLSHPVALTFTKENALLVLDSAAHSIKVYKADWG
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgggggccgaggcgtcggggagcgggccggcgctgcaggagctcgtgcgcgaggccgag
atcagcctgctcgagtgcaaggtgtgctttgagaggttcggccaccgccagcagcggcgc
ccgcgcaacctgccctgcggccacgtggtgtgcctggcctgcgtggccgccctggcgcac
ccgcggacgctggccctcgagtgccccttctgccgccgggcctgccggggctgcgacacc
agcgactgcctgccggtgcttcacctcctggagctcctgggctcgacgctccgcccaggc
cccgccgccccccgcgccgcgccctgcgcccccggggccctcacctgccaccgcgctttc
ggaggctgggggaccctggtcaaccccacgggcctggcgctgtgtcccaagacggggcgg
gtcgtggtggtgcacgacggcaggaggcgggtcaagatctttgactccgggggcgggtgt
gctcaccagtttggagagaagggggaggctgcccaggacgttaggtacccgctcgatgtt
accgtcaccaacgactgccatgtggttgtcaccgacgccggcgaccgttctatcaaagtg
tttgatttctttggccagatcaagctcgtcattgcaggccagttctccttaccttggggc
gtggagaccaccccgcagaacggcgtcgtggtgactgatgcggaggcaggctcgctgcac
ctgctggaagtcgacttccccgaaggggtcctccagaggacagagaggttgcaagttcat
ctgtgcagtccccgcggggtggccgtgtcttggctcaccggggccattgctgtcctagag
caccctctgggtctggggagcgcggtcggcagcaccacggtgaaggtgttcagcccgact
atgcagctgatcagccaggtggatagctttgggctgagcctctttttcccctccagaata
actgcctcggccgttacctttgatcaccaggggaatgtgattgttgctgatacttctggt
caggctgtcctatgcttaggaaaacctgaggaatttccagtcctgaagcccatcatcacc
cacggtctttcccatccggtggcactgaccttcaccaaggagaatgctcttctcgtgctg
gacagtgcagcacattctataaaagtctacaaggcggactgggggtaa
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