Neogale vison (American mink): 122900239
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Entry
122900239 CDS
T08764
Symbol
TRMT13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog isoform X1
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nvs03016
]
122900239 (TRMT13)
Enzymes [BR:
nvs01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
122900239 (TRMT13)
Transfer RNA biogenesis [BR:
nvs03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
122900239 (TRMT13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
OrgC
Motif
Other DBs
NCBI-GeneID:
122900239
NCBI-ProteinID:
XP_044094693
UniProt:
A0A8C7C398
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All DBs
Position
2:85885834..85906126
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AA seq
481 aa
AA seq
DB search
MAASAPAPHTTDFPVEGRCSYYVEKKKRFCRMVVAAGKRFCGEHAGAAEEENARKRILCP
LDPKHTVYEDQLSKHLKKCNSREKPKPDFFIQDINAGLKDETEIPEQLVPISSLSEEHLE
NLIKKLQKASEGLNSTLKDQIMSHPALHDALNDPKNGDSATKHLKQQASILGNIEKLKLL
GPRRCFVEFGAGKGKLSHWVDIALKDAEKVHFILVEKVTTRFKVDGKHRKKNSVFERLQI
DIQHLCLNKIPLLSKEKLPVVGIGKHLCGVATDLALRCLVETYAASCEERNEEPLAKRIK
NDKTGKEINTVAKKGNEKNVPEKWSPVAGIVIALCCHHRCDWRHYVGKEYFRALGLGAVE
FHYFQRMSSWATCGMRKTSLEASSLSTKRKDEQNDDSEEHDDGGCRITDESSGSAPGFLT
VEEKKKIGHLCKLLIDQGRVEYLQQKGFSPALQYYTDPLVSLENVLLTALPNHSSSPETT
A
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttctgcgccggccccgcacacgactgacttcccggttgagggtcgctgcagt
tactatgtggaaaagaagaagcgcttctgcaggatggtggtggcagcggggaaaagattc
tgtggggaacacgctggagccgcggaggaagaaaatgctcggaaaagaattctgtgtcct
ttagatccaaaacacacagtatatgaagatcaactatcaaagcatttgaaaaaatgtaac
tcaagagagaagccaaaacctgacttctttattcaagatattaacgcaggcttaaaagat
gaaacagaaatacctgaacaattagttccaatttcttctctttctgaagagcatttggaa
aacttaattaagaaattgcagaaagcaagtgaaggtttgaactctacacttaaagatcaa
attatgtcccatccagcattgcatgatgcccttaatgaccctaaaaatggtgattctgca
accaaacacctgaaacagcaggcttctattttaggtaacattgaaaaattaaagttactt
ggtccaagaagatgctttgttgagtttggagcaggaaagggaaaattatctcattgggtt
gatattgccttaaaagatgctgaaaaagttcacttcatcctagtagaaaaggtgaccacg
agattcaaggtagatggcaaacacagaaagaaaaattcagtatttgagagacttcaaatt
gatattcaacacttgtgtttgaataagattcctttgctaagcaaagaaaaactacctgtg
gtaggaattggaaagcatctatgtggtgtggcaacagatcttgcattacgatgtttggtt
gaaacctatgctgccagttgtgaggaaaggaatgaagaacctttagccaaacgcataaag
aatgataaaacaggaaaagaaattaacactgtggccaagaaaggaaatgagaaaaatgtc
ccagagaagtggagccccgtggctggcattgttattgcactctgttgtcaccacaggtgt
gattggagacattatgtgggcaaagagtatttcagggctctaggccttggagcagtggaa
ttccactacttccagcgaatgagtagttgggcaacttgtgggatgcgaaaaacatctttg
gaagcctccagtctcagcacaaagagaaaagatgagcagaacgatgacagtgaagagcat
gacgacgggggatgccgaatcacagatgaaagcagtgggagtgcgcctgggttccttact
gttgaagagaagaagaaaatagggcatctttgtaaattgctgattgaccaaggccgagtc
gagtatttacagcagaaaggattcagtcctgctttacagtattatacagatcctctggtg
tctttggaaaatgtattgttaactgctttaccaaatcattcttcatcaccagaaacaact
gcttaa
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