Neogale vison (American mink): 122900272
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Entry
122900272 CDS
T08764
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122900272 (PRPF38B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nvs03041
]
122900272 (PRPF38B)
Spliceosome [BR:
nvs03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
122900272 (PRPF38B)
Complex C
U4/U6.U5 tri-SnRNP related factors
122900272 (PRPF38B)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
122900272
NCBI-ProteinID:
XP_044094741
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Position
2:93537844..93547816
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AA seq
549 aa
AA seq
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MANNSPALTGNSQPQHQAAAAAAQQQQQCGGGGGGATKPAVSGKQGNVLPLWGNEKTMNL
NPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVRG
VGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDWF
ESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKNIDQQIKTRPR
KIKKDGKEGAEEIDRHVERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELERE
KERQRLEREAKEREKERRRSRSIDRGLERRRSSRSRERHRSRSRSRDRKGDRRDRDRERE
KENERGRRRDRDYDKERGNDREKERERSRERSKERRSRGEVEEKKHKEDKDDRRHRDDKK
DSKKEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKEKSNKRSRSGSQG
RTDSVEKSRKREHSPSKEKSRKRSRSKERSHKRDHSDSKDQSDKHDRRRSQSIEPESQEK
QHKNKDETV
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaacagccccgcgctgacaggcaactcgcagccgcagcaccaggcggccgcg
gccgcggcccagcagcagcagcagtgcggcggtggcggcggtggcgccaccaagccggcg
gtctcgggcaaacagggaaatgtgctaccgctgtggggcaacgagaagactatgaacctc
aaccccatgatcttgaccaatatcctgtcgtcgccttacttcaaagtgcagctctacgag
ctcaagacctaccacgaggtggtggacgagatctactttaaggtcacgcatgttgaacca
tgggagaaaggaagcaggaaaacagcaggccaaacggggatgtgcggaggggttcgaggt
gttggaacaggaggaattgtttctacagctttctgcttgttatacaaattatttactctg
aagctaactcgtaagcaagtgatgggtctcataacacacacagactctccatatattaga
gcccttggatttatgtatataaggtacacacagccccctacagatctctgggactggttt
gaatccttccttgatgatgaagaggacctagatgtgaaggctggtggaggctgtgtaatg
accattggagaaatgctacggtcttttctcacaaaactggagtggttttctaccctgttt
ccaagaattccagttccagttcagaagaatattgatcaacagatcaaaacccggcctaga
aaaatcaagaaagatgggaaggaaggtgctgaggaaatagacagacatgttgaacgcagg
cgttcaaggtctccaaggagatcactgagtccacggaggtccccaagaagatcaagaagt
agaagccatcaccgggagggccatgggtcttctagttttgatcgagaattagaaagagag
aaagaacgccagcgactagagcgcgaagccaaagaaagggagaaagaaaggcgaagatcc
cgaagtattgatcgggggttggaacgcaggcggagtagcaggagtagggaaaggcataga
agtcgtagtcgtagtcgggataggaaaggggatcgaagggacagagatagggaaagagag
aaagaaaatgagagaggtagaagacgggatcgtgactatgataaggaaagaggtaatgac
cgagaaaaggagcgagagcgatcaagagaacggtccaaggaacggagaagtaggggtgag
gtagaagaaaagaaacacaaagaagataaagatgataggcggcatagagatgacaaaaaa
gattccaagaaggagaaaaaacacagtaggagtagaagcagagaaaggaagcacagaagt
aggagtagaagtagaaatgcagggaaacgaagcagaagtaggagcaaagagaaatcaagt
aaacataaaaatgaaagtaaagaaaaatcaaataaacgaagtagaagtggcagtcaagga
agaactgacagtgtggaaaaatcaagaaaacgggaacatagccccagcaaagaaaaatct
agaaagcgtagcagaagcaaagaacgttcccacaaacgagatcacagtgatagtaaggac
cagtctgacaaacatgatcgtcgaaggagccaaagtatagaaccagagagccaagagaaa
caacataaaaacaaagatgagactgtgtga
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