Neogale vison (American mink): 122900288
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Entry
122900288 CDS
T08764
Symbol
SORT1
Name
(RefSeq) sortilin isoform X1
KO
K12388
sortilin
Organism
nvs
Neogale vison (American mink)
Pathway
nvs04142
Lysosome
nvs04722
Neurotrophin signaling pathway
nvs04979
Cholesterol metabolism
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
122900288 (SORT1)
09150 Organismal Systems
09154 Digestive system
04979 Cholesterol metabolism
122900288 (SORT1)
09156 Nervous system
04722 Neurotrophin signaling pathway
122900288 (SORT1)
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
BNR
Motif
Other DBs
NCBI-GeneID:
122900288
NCBI-ProteinID:
XP_044094774
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Position
2:complement(94083979..94151529)
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AA seq
831 aa
AA seq
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MERLRGAADGLLRWPHGLGLLLLFQLLPPETLGQDRLDAPPPPAAPLSRWSGPVGVSWGL
RAAAPGGPDPRGGRWRRSALEEDQDCGRVPDFVAKLANNTHQHVFDDLSVSVSLSWVGDG
TGIILVLTTFHVPLVIMTFGQSKLYRSEDYGKNFKDITNLINNTFIRTEFGMAIGPENSG
KVILTAEVSGGSHGGRIFRSSDFAKNFVQTNLPFHPLTQMMYSPQNSDYLLALSTENGLW
VSKDFGGKWEEIHKAVCLAKWGSENTIFFTTYANGSCKADLGALELWRTSDLGKSFKTIG
VKIYSFGLGGRFLFASVMADKDTTRRIHVSTDQGDTWSMAQLPSVGQEQFYSILAANDDM
VFMHVDEPGDTGFGTIFTSDDRGIVYSKSLDRHLYTTTGGETDFTNVTSLRGVYITSVLS
EDNSIQTMITFDQGGRWKHLRKPENSECDATAKNKNECSLHIHASYSISQKLNVPMAPLS
EPKAVGIVIAHGSVGDAISVMIPDVYISDDGGYSWTKMLEGPHYYTILDSGGIIVAIEHS
SRPINVIKFSTDEGQCWQTYMFTREPIYFTGLASEPGARSMNISIWGFTESFLTRQWVSY
TIDFKDVLERNCEEKDYTIWLAHSADPGDYADGCILGYKEQYLRLRKSSVCQNGRDYVVT
KQPSVCPCSLEDFLCDFGYFRPENDSKCVEQPELKGHDLEFCLYGREEHLTTNGYRKIPG
DRCQGGVNPAREVKDLKKKCTSNFLSPEKQNSKSNSVPIILATVGLMLVTVVAGVLIVKK
YVCGGRFLVHRYSVLQQHAEANGVDGVDALDTASHTHKSGYHDDSDEDLLE
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggagcggctccggggagctgcggatggcctcttgcgctggccccacggcctcggcctc
cttctcctcttccagctgctgccgccggagaccctcggccaggaccggctggacgcgccg
ccgccgcccgctgcgccgctgtcgcgctggtccggccccgtcggggtgagctgggggctg
cgcgcggccgcgcccgggggcccggatccccgcggcggccgttggcgccgcagcgcgctc
gaggaggaccaggactgcggccgggtcccggacttcgtcgccaagctggccaacaacacg
caccagcatgtgtttgatgatctcagtgtctcagtatccttgtcctgggttggcgatggc
actgggatcattctggtcttgactaccttccatgtaccactggtaattatgacttttgga
cagtccaagctatatcgaagtgaggactatggaaagaactttaaggatattacaaatctc
atcaataacaccttcattcggactgagtttggcatggctattggtcctgagaattctgga
aaggtgattttaacagcagaggtgtctggaggaagtcacggaggaagaatcttcagatcc
tcagattttgcaaagaactttgttcagaccaatctccctttccatcctctgactcaaatg
atgtatagccctcagaattctgattatcttttagccctcagcactgaaaatggcctgtgg
gtgtccaaggattttgggggaaaatgggaagaaatccacaaagcagtatgtttggccaaa
tggggatcagaaaacaccatcttctttaccacctatgcaaatggctcctgcaaagctgac
cttggggcactggaattatggagaacttcagacttggggaaaagcttcaaaaccattggt
gtgaaaatctactcatttggtcttgggggacgtttcctttttgcctctgtgatggctgat
aaggatacaacaagaaggattcatgtgtcaacagatcaaggggacacatggagcatggcc
cagctaccttctgtggggcaggaacagttctattctattctagcagctaatgatgacatg
gtgttcatgcatgtcgatgaacccggagataccggatttggaacaatctttacctcagat
gatcgaggcattgtctactccaagtccttagaccgacatctctataccaccacaggtggc
gagacagactttaccaatgtgacctccctccgtggggtctacataacaagtgtgctttca
gaagataattccatccagactatgatcacttttgatcaaggaggaagatggaagcatctg
aggaagcctgaaaatagtgaatgtgatgctacagcaaaaaacaagaatgagtgtagcctt
catattcacgcttcctacagcatctcccagaagctaaacgttccaatggccccactctct
gagcctaaggccgtcggcatagtcattgcccacggtagtgtaggggatgccatctcagtg
atgatcccagatgtatacatctcagatgatgggggttactcctggacgaagatgctggaa
ggaccccactattacaccatcctggattccggaggcatcattgtggccattgagcacagc
agccgtcctatcaatgtgattaagttctccacagatgaaggtcagtgctggcaaacctac
atgttcaccagggagcccatctattttactggcctcgcttcagaacctggagctcggtcc
atgaatatcagcatttggggtttcacagaatctttcctgactcgccaatgggtctcctac
accattgattttaaagatgtccttgaaaggaactgtgaggagaaggactataccatatgg
ctggctcattccgcagaccccggagattacgcagatggctgcatcttgggctacaaggag
cagtacctacggcttcgcaagtcgtccgtctgccagaacggtcgggactacgttgtgacc
aagcagccgtctgtctgtccctgctccctggaagacttcctctgtgattttggctacttc
cgtccagaaaatgactccaaatgtgtcgaacagccagagctaaagggccacgatctggaa
ttttgtctgtatggcagagaggagcacctgacaacaaatgggtaccgaaaaattccagga
gacagatgccaaggtggcgtgaatccagcccgagaagtaaaagacttgaaaaagaaatgc
acaagcaacttcctgagtcctgaaaagcagaactccaagtcaaattctgttccaatcatc
ctggccaccgtgggattgatgctggtcacagtcgtagcaggggtgctcattgtgaagaag
tatgtctgtggaggaaggttcctggtgcaccgctattccgtgttgcagcagcatgccgag
gccaatggtgtggatggcgtggatgccctggacacggcctcccacactcacaagagtggt
tatcatgacgactcagatgaggacctcctggaatag
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