Neogale vison (American mink): 122900407
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Entry
122900407 CDS
T08764
Symbol
CHD1L
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like isoform X1
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nvs03036
]
122900407 (CHD1L)
Chromosome and associated proteins [BR:
nvs03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122900407 (CHD1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
SWI2_SNF2
AAA_22
SLFN-g3_helicase
Torsin
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
122900407
NCBI-ProteinID:
XP_044094994
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Position
2:104965963..105048050
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AA seq
897 aa
AA seq
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MESSGAATCGSHMPGFLRALKTRSRGEVARALVQEQDLRQWGLTGIHLRSYQLEGVNWLA
QCFHGQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLILCPLSVLSNWREEMERFA
PGLSCIMYAGDKEERAHLQQDLKQESRFHVLLTTYEICLKDSSFLKSFPWSVLVVDEAHR
LKNQSSLLHKTLSEFSVVFSLLLTGTPIQNSLQELYSLLSFVEPDLFPKEQVGDFVQHYQ
DIEKESESARELHKLLQPFLLRRVKAEVATELPKKTEVVLYHGMSALQKRYYKAILMKDL
DAFENEMAKKVKLQNVLSQLRKCVDHPYLFDGVEPEPFEIGDHLIEASGKLHLLDKLLAF
LYSRGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGQQPVFIFL
LSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKIIRLIGRDTVEEI
VCRKAASKLQLTNAVIEGGHFTLGAQKPAADADLQLSEILKFGLDKLLSSEGSTMDEIDL
ETILGETKDGQWISEALPTMEGRVREQEEGKNHMYLFEGKDYSKEPSKEDRKSFEQLVNL
QKKHLEKTTQEGRLLRNKSSVLLPGLAEGSTKRKRILSPEELEDRRKKRQAAAAKRKRLM
EEKKRKKEEAEHEKKMAWWESNNYQSFCLPSEESEPEVLEDREDERSAQLDYEDPDSTAI
KYVSGDVTHPQAGAEDAVIVHCIDDSGRWGRGGLFTALETRSGEPRKIYELAGKMKDLNL
GGVLLFPIDDKESRNSGQDLLALIVAQHRDRANVLSGIKMAALEEGLKKIYLAAKRKKAS
VHLPRIGHATKGFNWYGTERLIRKHLAAKGIPTYIYYFPRSRAAAHPPSSSPGQLAP
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggagagttcgggcgccgcgacgtgtgggagccacatgcccggtttcctacgtgctctg
aagacccggagccgaggcgaggtggcgcgggcactagtgcaggagcaggacctaaggcaa
tggggcctgacagggattcatctacgctcttatcagctggagggagtcaactggcttgcc
cagtgctttcatggtcagaatggctgcatcctgggagatgagatgggcctgggtaagacc
tgccagactattgctctcttcatttacttggcaggaagattaaatgatgaaggaccgttt
ctgattctttgccccttgtctgttttgagcaactggagagaagagatggagagatttgcg
ccaggtctttcctgtataatgtatgcaggggacaaggaggagagagcccatctacagcaa
gacctaaaacaagagtcacgttttcatgtgctgctaactacctatgagatttgcttgaaa
gattcatcatttctaaaatccttcccatggagtgtacttgttgtggatgaagctcacagg
ttgaaaaaccaaagctccttgctgcataagaccctttcggagttctcagtagtcttcagt
ctcctgttgaccggaactcccatccagaacagcctccaagagctctactctcttctcagc
tttgtggagcctgacctctttcccaaggagcaggtgggagattttgttcaacattaccag
gatattgagaaggagtctgagtcagcaagggaactacacaaactcttgcagccatttctg
ttgaggcgggtgaaagctgaggtagctacagagcttcccaagaagacagaggtagtgcta
taccatggcatgtcagcactgcagaaaagatactacaaggccattttgatgaaagactta
gatgcatttgaaaatgagatggcaaagaaagttaaacttcagaatgtcttgtcccagctt
cgaaagtgtgtggatcatccatatctgtttgatggtgtggaaccagagccttttgagatt
ggggaccacctgattgaggccagtgggaaacttcatctattggataagctgctggcattc
ctgtattccaggggccatcgagttttacttttctcccagatgacccagatgttggatatt
ctccaagactacatggactatagagggtacagctatgagcgtgtggatggttctgtgaga
ggagaggagagacacctggccattaagaactttggacagcagcctgtttttatttttctc
ctgagtaccagagcaggaggagttggcatgaacttaacggctgcagataccgttattttt
gtcgacagtgatttcaatcctcagaatgacttgcaagcagctgccagggctcaccggatt
ggccagaacaagtctgttaaaattattcggctgattggccgagacactgtggaggagata
gtctgtaggaaagcagcctccaaactgcagctgaccaatgcagtcatagagggaggccat
tttactctgggggcccagaaacctgcagccgatgctgacctccagctgagtgaaatactc
aaattcggtttggataaactgctgtcatctgagggcagcaccatggatgaaatagacctg
gagacgatcctgggagaaacaaaagatggccagtggatctctgaagccttgcctacaatg
gaaggcagagtcagggagcaagaggaaggcaaaaaccatatgtacttatttgaaggtaaa
gattattccaaggagcctagtaaagaagatagaaaatcatttgagcaactggtgaacctt
cagaaaaagcatttggagaaaactacacaagagggccggctactccgaaataaaagcagt
gttctcctcccaggccttgcggaggggtctacgaaaaggaagcggattctgagcccagag
gaactcgaggacagaaggaagaagagacaagcagcagcagccaagagaaagagactaatg
gaggaaaagaagaggaaaaaggaagaagcagaacacgagaaaaagatggcctggtgggag
tccaacaattaccagtccttctgcctgccttctgaggagagcgaaccagaggtcctagag
gacagggaagacgagaggtctgcccagctggattatgaagatccagattcaactgccatc
aagtacgttagcggtgatgttacccacccacaggctggggcagaggatgctgtcatcgtg
cactgcatagatgactctggtcgctggggccgaggtggtttattcacagctttggaaaca
cgatccggtgaaccaagaaaaatatatgagctggctgggaaaatgaaagacttgaatttg
ggaggcgtccttttatttcctattgatgataaagagtcaagaaacagtgggcaagatctg
ttggccttgattgtggctcagcaccgtgaccgcgcaaatgtcctgtctggcattaagatg
gcagccctagaagagggcttgaagaagatctatttagcagcaaagagaaagaaagcaagt
gttcatcttccacgcattggacatgccacaaaaggttttaactggtatggtactgagcga
cttattcggaaacatttggctgcgaaaggcatcccaacttacatatactactttcctaga
agcagggcagctgctcatccaccatcctcttctccgggacagctggcaccttaa
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