Neogale vison (American mink): 122900541
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Entry
122900541 CDS
T08764
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122900541 (TAF5L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nvs03021
]
122900541 (TAF5L)
03036 Chromosome and associated proteins [BR:
nvs03036
]
122900541 (TAF5L)
Transcription machinery [BR:
nvs03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
122900541 (TAF5L)
Coactivators
SAGA/TFTC/STAGA complex
122900541 (TAF5L)
Chromosome and associated proteins [BR:
nvs03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
122900541 (TAF5L)
STAGA complex
122900541 (TAF5L)
TFTC complex
122900541 (TAF5L)
SAGA complex
122900541 (TAF5L)
SLIK complex
122900541 (TAF5L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
TFIID_NTD2
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
NBCH_WD40
RMC1_N
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_Nup120_160
Beta-prop_EIPR1
Beta-prop_WDR19_1st
WD40_RFWD3
PEP5_VPS11_N
PROPPIN
Beta-prop_IP5PC_F
eIF2A
Ge1_WD40
WD_LRWD1
Nbas_N
Beta-prop_ELP1_1st
Mala_s_1-like
ODR4-like
vATP-synt_AC39
Motif
Other DBs
NCBI-GeneID:
122900541
NCBI-ProteinID:
XP_044095224
LinkDB
All DBs
Position
2:complement(148756199..148786167)
Genome browser
AA seq
602 aa
AA seq
DB search
MKSSTRRMEIVVVMKRVRTEQIQMAVSCYLKRRQYVDSDGPLKQGLRLSQTAEEMAANLT
VQSESGCANIVSAAPCQAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLNL
VQNSPKSTVESFYSRFHGMFLQNASQKDVIEQLQTTQTIQDILSNFKLRAFLDNKYVVRL
QEDSYDYLIRYLQSDNNTALCKVLTLHIHLDVQPAKRTDYQLYTSGSSSRSEGSGLEPTD
MPAPILQNEAALEVLQESIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPDSKLLAAGF
DNSCIKLWSLRSKKLKSEPHPVDVSRIHLACDILEEEDDEDDNAGTEMKILRGHCGPVYS
TRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRT
ARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGH
RGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIAS
ASMDNSVRVWDIRNTHCSAPADGSSGELVGVYTGQMSNVLSVQFMACNLLLVTGITQENQ
EH
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagttccacaagaaggatggaaatcgtggtggtcatgaaacgagtgcgcaccgag
cagattcagatggcagtgtcctgctacctcaaacgccggcagtacgtggactccgacggt
cccctgaagcaaggactgcggctgtcacagactgctgaggagatggcagccaacctcaca
gtccaatcagaatccggttgtgccaacatagtgtctgcagccccttgccaggcagagccc
cagcagtatgaagtacagtttggacgactacggaattttctcactgattctgattcccag
catagccacgaagtgatgcctctcctctatcctctctttgtctacctccatctcaacctg
gtccagaatagtccgaagagcacagtggaaagtttttacagccgcttccatggaatgttt
ctgcagaacgctagccagaaggatgtcattgagcagctacagaccactcaaaccatccag
gacatcctgtctaacttcaagcttcgagcattcctagataacaagtacgtggtccgtctc
caggaagacagctacgactaccttatccgctacctccaaagtgacaacaacaccgccctg
tgcaaagtcctcaccttacatatccatcttgacgtgcagcccgccaagagaacagattac
cagctctacaccagcggcagctcctctcggagtgagggcagcggcctcgagcccaccgac
atgcctgcccctattctgcagaacgaggctgccctggaggtcttacaggagagcattaag
cgtgtcaaggatggccctccctccctcaccaccatctgtttctatgccttctataacaca
gagcagctgttgaacactgcagaaatctccccagatagcaagctgcttgctgcggggttt
gacaactcctgtataaaactgtggagtttacgatccaagaagttaaaatcagaaccccat
ccagtagacgtgtcccgcatccacttggcttgtgacattctggaggaggaggatgatgag
gatgacaatgcgggcacagagatgaagatcctccggggacactgtggaccagtatacagc
acaaggttccttgcagacagctcagggttgctctcttgttctgaagacatgtccattagg
tactgggacctcggcagtttcaccaacactgtgttgtaccaaggacatgcctaccctgtg
tgggacctggacataagcccgtatagcctgtactttgccagcgggtcccatgatcgcacc
gcaaggctgtggtcatttgatcggacgtacccgctgagaatatatgccggacacctggca
gatgtggactgtgtcaaattccaccctaattcaaactacttagccacgggctcgaccgac
aagactgtccggctatggagcgctcaacagggcaactcagtgaggctcttcacgggccac
cgcggccctgtgctctctcttgccttctctcccaacggtaagtacttggcatcagccggc
gaggaccagcggctgaagctatgggacttggcctctgggaccctttataaagaactgagg
ggccacacggacaatatcaccagcctcaccttcagcccggacagcagcctgatcgcgtcc
gcgtccatggacaactccgtgcgcgtctgggacatcaggaacacacactgcagtgcacct
gccgacggctcctcaggcgaactcgtgggcgtgtacactgggcagatgagcaacgtgctg
agcgtgcagttcatggcctgcaacctccttctagtgactggaatcacacaagaaaatcag
gaacattaa
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integrated database retrieval system
