Neogale vison (American mink): 122900681
Help
Entry
122900681 CDS
T08764
Symbol
CSTF2T
Name
(RefSeq) cleavage stimulation factor subunit 2 tau variant
KO
K14407
cleavage stimulation factor subunit 2
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122900681 (CSTF2T)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvs03019
]
122900681 (CSTF2T)
Messenger RNA biogenesis [BR:
nvs03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
122900681 (CSTF2T)
U7-dependent histone pre-mRNA processing factors
122900681 (CSTF2T)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
DUF8400
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
122900681
NCBI-ProteinID:
XP_044095460
LinkDB
All DBs
Position
2:complement(167440600..167444386)
Genome browser
AA seq
620 aa
AA seq
DB search
MSSLAVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGPAAPIIDSPYGDPID
PEDAPESITRAVASLPPEQMFELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMR
IMDPEIALKILHRKIHVTPLIPGKSQPVSGPGPVPGPGPGPGPGPGPGPGLGPGPNVLLN
QQNPPAPQPQHMARRPVKDIPPLMQTPIQGGIPAPGPIPAAVPGPGPGALTPGGGMQPQV
GMPGVGPVPLERGQVQMSDPRAPIPRGPMTAGGLPPRGLLGDAPNDPRGGTLLSVTGEVE
PRGYLGPPHQGPPMHHASGHDGRGPSSHEMRGGPLADPRLLMGEPRGPMIDQRGLAMDGR
GSRDSRGLETRAMETEVLETRVMERRGMETCAMETRGMEARGIDGRGMEIRGPGPSSRGP
MTGGIQGPGPISMGAGGPQGPRQVSSISGVGNPGAGMQGAGIQGAGMQGAGIQGAGMQGA
GMQGAGIQAVGMQGAGKQGGGQPSSFSPGQSQVTPQDQEKAALIMQVLQLTADQIAMLPP
EQRQSILILKEQIQKSTGAS
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtttggcggtgagggacccggcgatggatcggtcgctgcgttccgtgttcgtg
ggcaacattccgtacgaggccaccgaggagcagctgaaggacattttctcggaggtgggt
tcggtggtcagcttccgactggtgtacgaccgcgagacgggcaagcccaagggctatggc
ttctgcgagtaccaggaccaggagaccgcgctcagtgccatgcggaacctcaacgggcgc
gagttcagcggcagggcgctgcgggtggacaacgccgccagcgagaagaacaaggaggag
ctcaagagcctcgggcccgcggcgcccatcatcgactccccgtacggggaccccatcgac
cccgaggacgcccccgagtccatcaccagggcggtcgccagcctgccgccggagcagatg
ttcgagctcatgaagcagatgaagctgtgcgtgcagaacagccaccaggaagcgcggaac
atgctgctgcagaacccgcagctggcctacgcgctgctgcaggctcaggtggtcatgagg
atcatggaccccgagatcgcgctgaagatcctgcaccgcaagatccatgtcacgccgctg
atcccgggcaaatcccagcctgtctccggccccggccccgtccccggccctggtcctggt
cccggtcccggtcccggtcccggcccggggctgggtcccggccccaatgttctgctcaac
cagcagaaccctcccgccccacagcctcagcacatggccagaagacccgtcaaagacatc
cctccactgatgcagacccctatccagggcgggattccggccccgggccccataccggcc
gcggttcccgggccggggcctggtgccttaacccctggtggaggaatgcagccccaggtt
ggaatgccaggcgtcggtccagtgcctttagagcggggtcaggtgcagatgtcggatcct
agagctcctatacctcgtgggcccatgactgctgggggcctccctcctcgaggactgttg
ggagatgctccaaacgacccacgtggagggactctgctttcagtcactggagaagtagag
cccagaggctatcttggcccgcctcatcagggcccccccatgcaccatgcctctggtcat
gacggccggggcccttcctcacatgagatgaggggagggccgttagcagatcccagactg
ctgatgggagagcccaggggacccatgatagatcagagaggtctcgctatggatggtaga
ggtagtagagattctcgagggctggagactcgagccatggagactgaagtcttagagaca
cgagtgatggagagaagaggaatggagacctgtgcgatggaaaccagagggatggaagcg
agaggcatagatggaagagggatggagatacggggtcctggccccagttccagaggccct
atgactggtggaatccagggtcctgggcccattagtatgggggcaggtggtcctcaggga
cctagacaggtctccagcatttccggggtgggaaatcctggagctggcatgcagggggca
ggcatacaaggagcgggcatgcagggggcgggcatccaaggagcaggtatgcagggggcg
ggcatgcagggggcaggcatacaagcagtgggcatgcagggggcaggcaagcaaggtgga
ggccagcctagcagttttagtcctgggcagagccaggtaactccacaggatcaagaaaag
gcagctctgatcatgcaggttcttcaactgactgcagatcagatcgccatgctgccccct
gagcaaaggcagagcatcctcattttaaaggaacaaattcagaaatcgactggggcttct
tga
DBGET
integrated database retrieval system
