Neogale vison (American mink): 122900737
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Entry
122900737 CDS
T08764
Symbol
DDX50
Name
(RefSeq) ATP-dependent RNA helicase DDX50 isoform X1
KO
K13183
ATP-dependent RNA helicase DDX50 [EC:
5.6.2.7
]
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nvs03041
]
122900737 (DDX50)
Enzymes [BR:
nvs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122900737 (DDX50)
Spliceosome [BR:
nvs03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
122900737 (DDX50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
AAA_30
Motif
Other DBs
NCBI-GeneID:
122900737
NCBI-ProteinID:
XP_044095593
UniProt:
A0A8C7EQQ9
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All DBs
Position
2:183363848..183399704
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AA seq
739 aa
AA seq
DB search
MMPGKLLWGDIMELEAPLEETESQRKERQKSDRRKSRHHYDSDEKSETRENGVADNLDGP
KPKKAKMKEKLNGDTEEGCNNRLSDEFSKSHKSRRKDLSNGDIDEYEKKSKRVSSLDSST
PKSSDNKLEETLTREQKEGAFSNFPISEETIKLLKGRGVSYLFPIQVKTFGPVYEGKDLI
AQARTGTGKTFSFAIPLIERLQRNQETIKKSRSPKVLVLAPTRELANQVAKDFKDITRKL
SVACFYGGTSYQSQINHIRNGIDILVGTPGRIKDHLQSGRLDLSKLRHVVLDEVDQMLDL
GFAEQVEDIIHESYKTDSEDNPQTLLFSATCPQWVYKVAKKYMKSRYEQVDLVGKMTQKA
ATTVEHLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIFCETKKNVTEMAMNPHIKQNAQCL
HGDIAQSQREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIHRSGR
TGRAGRTGICICFYQPRERGQLRYVEQKAGITFKRVGVPSTMDLVKSKSMDAIRSLASVS
YAAVDFFRPSAQRLIEEKGAVDALAAALAHISGASSFEPRSLITSDKGFVTMTLESPEEI
EDISCAWKELNRKLSSNAVSQITRMCLLKGNMGVCFDVPTTESERLQAEWHDSDWILSLP
AKLPEIEEYYDGNTSSNSRQRSGWSSGRSGRSGRSGGRSGGRSGRQSRQGSRSGSRQDGR
RRSGNRNRSRSGGHKRSFD
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgatgcctgggaaactcctctggggggacattatggagctggaggcacccttggaggag
accgaaagccagaggaaggagaggcaaaagagtgatagaaggaagtcaaggcaccattat
gactcagatgagaaatcggaaacaagagaaaatggtgttgcagataacttggatggtccc
aagcccaaaaaagctaaaatgaaagagaagctaaatggagacactgaagaaggatgtaat
aatagactttcagatgaattttctaaatctcataagtcaagaaggaaagatctgtcaaat
ggagatattgatgaatatgaaaaaaaatcaaagcgagtgtcatccttagatagttctact
cctaaatcaagcgataataaactagaggagaccctaacacgtgaacagaaagaaggagcc
ttctccaatttccctatttctgaagagacaataaagcttctaaaaggtcgaggggtatcc
tatctttttcctattcaagttaagacctttggtcctgtttatgaaggaaaagatttaatt
gctcaagcacggacaggaacaggaaagacattttcttttgccatccccttgattgaaaga
ctccaaagaaatcaagagacaattaaaaaaagccgctcaccaaaggttcttgttttggct
cctacaagggaactggcaaaccaagtagccaaagacttcaaagatatcactaggaaactc
agtgtggcatgtttttatggtgggacatcctatcaaagccaaattaatcatattcgaaat
ggtattgacatcttggtcgggactcctggtcgtatcaaagaccatctgcagagcggccgg
ttagatctttctaaactgcgccatgttgtgcttgatgaagtggatcaaatgttagattta
ggttttgctgaacaagtcgaagatattatccatgaatcctacaaaactgattctgaagac
aatcctcagactttacttttttctgcaacttgcccacagtgggtgtacaaagttgcaaaa
aaatacatgaaatccagatatgaacaagttgaccttgttggaaaaatgactcaaaaggct
gcaactactgtggaacatttggctatccagtgccattggtctcaaaggccagcagttatt
ggagatgtccttcaagtctacagtgggtctgaagggagggctattattttctgtgagacc
aaaaagaatgtaactgaaatggccatgaatccacatataaaacagaatgcccagtgctta
catggggacattgcacagtcacaaagagaaattacactgaaaggctttagagaaggtagt
tttaaagttttggtggcaaccaacgtggctgctcgtggtttggacattcctgaggttgac
ctggtgattcaaagttctcctccccaggatgttgagtcctatattcatcgttctggacgc
acaggtagagctggccggacagggatttgcatatgtttttatcaacccagagaaagaggt
caactaagatatgtggaacaaaaagcaggaattacttttaaacgtgtaggtgtaccttct
acaatggatttagttaaatctaaaagcatggatgccatcaggtctctagcttccgtttct
tatgctgctgttgattttttccgaccatcagctcagagattaatagaagagaaaggggca
gtggatgcattggctgcagcattagcccatatctccggtgcatcaagttttgaaccacga
tctttgatcacctctgataagggatttgtcaccatgactctggaaagcccagaagaaata
gaggatatcagctgtgcatggaaagaacttaacagaaagctgagtagtaatgctgtgtcc
caaattaccagaatgtgcctcctaaaaggaaatatgggtgtttgctttgacgttcccaca
actgaatcagaaaggttacaggcagagtggcatgattcagactggatactttcattgcca
gccaagctacctgaaattgaagaatattatgatggaaacacatcctctaactccaggcag
aggagtggctggtcaagtggccggtcaggccggtctggccggtcgggtggtcgatctggt
ggccggtcaggtagacagagtcgacagggaagtcggtcaggaagtcgacaagatggtaga
cgacgaagtgggaatagaaatcgatcaagaagcgggggccacaaacggagttttgactga
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