KEGG   Neogale vison (American mink): 122900811
Entry
122900811         CDS       T08764                                 
Symbol
VCL
Name
(RefSeq) vinculin isoform X1
  KO
K05700  vinculin
Organism
nvs  Neogale vison (American mink)
Pathway
nvs04510  Focal adhesion
nvs04517  IgSF CAM signaling
nvs04518  Integrin signaling
nvs04519  Cadherin signaling
nvs04520  Adherens junction
nvs04670  Leukocyte transendothelial migration
nvs04810  Regulation of actin cytoskeleton
nvs04820  Cytoskeleton in muscle cells
nvs05100  Bacterial invasion of epithelial cells
nvs05146  Amoebiasis
Brite
KEGG Orthology (KO) [BR:nvs00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    122900811 (VCL)
   04518 Integrin signaling
    122900811 (VCL)
   04519 Cadherin signaling
    122900811 (VCL)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    122900811 (VCL)
   04520 Adherens junction
    122900811 (VCL)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    122900811 (VCL)
   04810 Regulation of actin cytoskeleton
    122900811 (VCL)
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    122900811 (VCL)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    122900811 (VCL)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    122900811 (VCL)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:nvs04812]
    122900811 (VCL)
   04147 Exosome [BR:nvs04147]
    122900811 (VCL)
Cytoskeleton proteins [BR:nvs04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     122900811 (VCL)
Exosome [BR:nvs04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   122900811 (VCL)
SSDB
Motif
Pfam: Vinculin Talin_IBS2B VMAP-M0 WHD_2nd_SelB_bact
Other DBs
NCBI-GeneID: 122900811
NCBI-ProteinID: XP_044095802
LinkDB
Position
2:187698674..187816090
AA seq 1066 aa
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE
INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAIR
QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGL
DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALTEARKIAE
LCDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNRA
VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD
LLAKCDRVDQLTAQLADLAARGEGESPQARALASQLQDSLKDLKTRMQEAMTQEVSDVFS
DTTTPIKLLAVAATAPPDAPSREEVFDERAANFEHHSGRLGATAEKAAAVGTANKATVEG
IQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK
SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQEP
DFPPPPPDLEQLRLADELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVINQPMMM
AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDE
VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT
EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq 3201 nt   +upstreamnt  +downstreamnt
atgccggtgtttcatacgcgcacgatcgagagcatcttggagccggtggcgcagcagatc
tcgcacctggtgatcatgcacgaggaaggcgaggtggacggtaaagccatccctgacctc
accgcgcccgtggccgccgtgcaggcggccgtcagcaaccttgtccgggttggaaaagag
actgttcaaaccactgaggatcaaattttgaagagagatatgccaccagcatttattaag
gttgagaatgcttgcaccaagctcgtgcaggcagcccagatgcttcagtcggatccttat
tctgtgcccgctcgagattatctcattgatgggtcaaggggcatcctctctggcacatca
gacctgcttctcaccttcgatgaggctgaggttcgtaaaattattagagtttgcaaagga
attttggaatatcttacagtggcagaggtggtggaaaccatggaagatttggtcacctac
acaaagaatcttggaccaggaatgacaaagatggccaagatgattgatgagaggcagcag
gaactgactcaccaggagcaccgagtgatgttggtgaactccatgaacaccgtgaaagag
ttgctgccagttctcatttcagctatgaagatttttgtaacaactaaaaattcaaaaaac
caaggaatagaagaagctttgaaaaatcgcaattttactgtagagaagatgagtgctgaa
attaatgaaatcattcgtgtcttacaactcacttcttgggatgaagatgcctgggccagc
aaggacactgaagccatgaagagagcactggcctccatagactccaaactgaaccaggcc
aaaggttggctccgtgaccccagtgcctctccaggggatgctggtgagcaggccatcaga
cagatcttagatgaagctggaaaagtcggtgaactctgtgcaggcaaagaacgcagggag
atcctgggaacctgtaaaatgctggggcagatgactgatcaagtggctgacctccgagcc
agaggacaaggggcctcacccgtggccatgcagaaagcccagcaggtgtcgcagggtctg
gatgtgctcacagcaaaagtggaaaatgcagctcgcaagctggaagctatgaccaactcc
aagcagagcattgccaagaagattgatgctgctcagaattggcttgcagatccaaatgga
gggccagaaggagaagaacagattcgaggggctttgactgaggctcggaagatagcagaa
ttatgtgatgatcctaaagagagagatgacattctacgttctcttggggaaatatctgct
ctgacttctaaattagcagatctacggagacagggcaaaggagattccccagaggcccga
gcattggccaaacaggtggccacagccctgcagaacttgcagaccaaaaccaatagagct
gtggccaacagcaggcccgccaaggcagctgtccacctggagggcaagattgagcaggca
cagcggtggattgataatcccacagtggatgaccggggcgttggtcaggctgccatccgg
ggccttgtggccgaagggcatcgtttggctaatgtcatgatggggccatatcgccaagat
cttcttgcaaagtgtgaccgcgtggaccagctgacggcccagttggctgacctggctgcc
agaggggaaggagagagtcctcaggcgagagcccttgcctctcagctccaagactcctta
aaggatctgaaaacccggatgcaagaggcgatgactcaggaggtgtccgatgttttcagc
gataccacaactcccatcaagctgttggcggtggcggccactgcgcctcctgatgctccc
agtagggaggaagtatttgatgagagggcggctaacttcgagcaccattcaggaaggctt
ggtgccacggcggagaaggcggctgctgttggaactgctaataaagccacagtggaaggc
attcaggcatcagtaaagacggcccgagaactcacaccccaggtcatctcagctgctcgc
atcttacttaggaatcctggaaatcaagctgcttacgaacattttgagaccatgaagaac
cagtggatcgataatgtcgaaaaaatgacagggctggtggatgaagctatcgataccaaa
tctctactggatgcttctgaagaagcaattaaaaaagacctggacaagtgtaaagtagcc
atggccaacatccagccacagatgctggttgccggggccaccagcattgcccgtcgggcc
aaccgtatcctgctggtggccaagagggaggtggagaactcggaggatcccaagttccgc
gaggctgtgaaagccgcctctgacgaattgagcaagaccatctcccctatggtgatggac
gccaaggctgtggctggaaacatctctgaccctggcctgcaaaagagcttcctggactcg
ggttatcggatccttggagctgtggccaaggtcagagaagccttccaacctcaggagcct
gacttcccacctcctcctccggatcttgaacagctccgtctggctgatgagcttgctcct
cccaaaccacctctgcctgagggtgaggtccctccgcccaggcccccaccaccagaggag
aaggatgaagagtttcctgagcagaaagccggggaggtgatcaaccagccaatgatgatg
gctgccaggcagctccacgatgaggctcgcaagtggtccagcaagggcaatgacatcatt
gcagcagccaagcgcatggctctgctgatggctgagatgtctcggctggtaagagggggc
agtggtaccaagcgggcactgattcagtgtgccaaggacattgccaaggcctcagatgag
gtgacacggttggccaaggaggttgccaagcagtgcacagataagcggattagaaccaac
ctcttacaggtatgcgagcgaatcccaaccataagcacccaactcaagatcctgtccacg
gtgaaggccactatgctgggccggaccaacatcagtgacgaggagtccgagcaggccaca
gagatgctggttcacaatgcccagaaccttatgcagtctgtgaaggagaccgttcgagaa
gcagaagcggcttcaatcaaaattcgaacagatgctggatttacactacgctgggttaga
aagactccctggtaccagtag

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