Neogale vison (American mink): 122900839
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Entry
122900839 CDS
T08764
Symbol
SFTPD
Name
(RefSeq) pulmonary surfactant-associated protein D isoform X1
KO
K10068
pulmonary surfactant-associated protein D
Organism
nvs
Neogale vison (American mink)
Pathway
nvs04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122900839 (SFTPD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nvs04131
]
122900839 (SFTPD)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
nvs04091
]
122900839 (SFTPD)
Membrane trafficking [BR:
nvs04131
]
Endocytosis
Phagocytosis
Opsonins
122900839 (SFTPD)
Lectins [BR:
nvs04091
]
C-Type lectins
Collectins
122900839 (SFTPD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Surfac_D-trimer
Lectin_C
Motif
Other DBs
NCBI-GeneID:
122900839
NCBI-ProteinID:
XP_044095868
LinkDB
All DBs
Position
2:192761894..192776997
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AA seq
375 aa
AA seq
DB search
MLLLSLSVLMLLTRPLSSLGAEMKTYSQRTAASTCTLVMCSPMENGLPGRDGRDGREGPR
GEKGDPGLPGAVGRAGTPGPAGPVGPKGDNGSAGEPGPKGDSGPSGPPGPRGVPGSAGRE
GPSGKQGSVGPQGPPGPKGEAGPKGEVGVAGKPGSAGTRGPTGVKGERGAPGERGAPGNA
GAAGPTGAMGPPGPPGAKGPPGLKGDRGAPGDKGAKGESGIQDITALRQQVEALHGQVQH
LQNAFSQYRKVDLFPNGQAVGEKIFKTGGFEKNFEDAQLVCMQAGGQMASPRSAAENEAV
QQLATAHNKAAFLSVTDIKTEGKFIYPSGEPLAYSNWAPGEPNNNGGSENCVEIFTNGKW
NDKSCGEQRLVVCEF
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgcttctcctctctctctccgtgctgatgctgctcacacggcccctgagctccctggga
gcagaaatgaagacctattcccagagaacagcggccagcacctgcaccctggtcatgtgt
agccccatggagaatggcctgcccggtcgtgatggacgggatgggagagagggcccccgg
ggcgagaagggggatccaggcttaccaggagctgtagggagagccgggacgcctggccca
gctggcccagttgggcccaaaggggacaatggctctgctggagagcctggaccaaaggga
gactccggaccgtctggacctccaggacctcgaggtgtgcctggttcagccggcagagag
ggtccgtcagggaagcaggggagtgtaggacctcaaggcccacctggcccaaaaggagag
gccgggcccaaaggagaagtgggtgtggcaggcaagccgggctctgcggggacacgaggc
cccacgggtgttaaaggagagagaggggcccccggtgagcgtggagcccccgggaatgct
ggggcggcaggacccactggagccatgggtccgccgggacctccaggtgccaaaggaccc
ccaggactgaagggggacagaggtgctcctggggacaaaggcgcaaagggagagagtggg
attcaggacatcactgctctgaggcagcaggtggaggccttgcatggacaggtacagcac
ctccagaacgccttctctcagtacaggaaagtagacctctttcccaatggccaagctgtc
ggggagaagatcttcaagacaggaggttttgaaaagaattttgaggacgcgcagctggtg
tgtatgcaggcggggggacagatggcctccccacgctctgcagccgagaacgaggccgtg
cagcagctggccactgctcacaacaaggctgctttcctgagcgtgaccgacatcaagaca
gagggcaagttcatctatcccagcggggagcccctggcctattccaactgggcccctggg
gagcccaacaacaatggcggctcagagaactgtgtggagatcttcaccaacggcaagtgg
aatgacaagtcctgcggggagcagcgcctggtggtctgcgagttctga
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