Neogale vison (American mink): 122900950
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Entry
122900950 CDS
T08764
Symbol
PDLIM1
Name
(RefSeq) PDZ and LIM domain protein 1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
nvs
Neogale vison (American mink)
Pathway
nvs04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122900950 (PDLIM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
nvs04990
]
122900950 (PDLIM1)
Domain-containing proteins not elsewhere classified [BR:
nvs04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
122900950 (PDLIM1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
DUF3322
Motif
Other DBs
NCBI-GeneID:
122900950
NCBI-ProteinID:
XP_044096080
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All DBs
Position
2:complement(208008576..208053437)
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AA seq
329 aa
AA seq
DB search
MTTQQIVLQGPGPWGFRLVGGKDFEQPLAISRVTPGSKAAIANLCIGDVITAIDGENTSS
MTHLEAQNKIKGCTDNMTLTVTRSEQKIWSPLVTEEGKRHPYKMNLASEPQEVLHIGSAH
NRSAMPFTASPASSSAPRVITNQYNNPAGLYSSENITNFNNALESKTAAGGQETNGRALD
HSQLPSGLVIDKESEVYKMLQEKQELNEPPKQSTSFLVLQEILESEEKGDPSKPSGFRSV
KAPVTKVAASIGNAQKLPMCDKCGTGIVGVFVKLRDRHRHPECYVCADCGTNLKQKGHFF
VEDQIYCEKHARERVTPPEGYDVVTVFPK
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaccacccagcagatagtccttcagggcccgggaccgtggggcttccgcctcgtgggg
ggcaaggacttcgagcaacccctggccatttcccgggtcactcccggaagcaaggctgcg
atagctaacttatgcatcggagatgtgatcacagccatcgatggggaaaataccagcagc
atgacacacttggaggctcagaacaaaatcaagggctgcacagacaacatgactctcaca
gtcaccagatcggaacaaaagatctggtccccgctggtgaccgaggaagggaagcgtcat
ccgtacaagatgaatttagcctctgaaccccaagaggtactgcacatagggagtgcccac
aaccggagtgccatgcccttcactgcctcaccggcctccagctcagcccccagggtcatc
acaaaccaatacaacaacccggctggcctctattcctctgaaaacataaccaacttcaac
aatgccttggagtccaagaccgcagccggcgggcaggagacgaacggcagagccttagac
cattctcagcttccaagcggactcgtcatcgacaaagaatctgaagtgtacaagatgctt
caagagaaacaggagttaaatgagccccccaagcagtccacttcattcctggttttgcag
gaaatcctagagtctgaggagaaaggggatcccagcaagccctcaggtttcagaagcgtc
aaggctccagtcaccaaagtggcagcgtcgattggaaatgcccagaagttgcccatgtgt
gacaaatgtggcaccggtattgtcggcgtgtttgtgaagctgcgagaccgccaccgtcac
cctgagtgttatgtgtgcgctgactgtggcaccaacctgaaacagaagggccacttcttc
gtggaggaccaaatctactgtgaaaagcacgcccgggagcgagtcacaccccctgagggc
tacgacgtggtcactgtgttccccaagtga
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