Neogale vison (American mink): 122901034
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Entry
122901034 CDS
T08764
Symbol
BTRC
Name
(RefSeq) F-box/WD repeat-containing protein 1A isoform X1
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
nvs
Neogale vison (American mink)
Pathway
nvs04114
Oocyte meiosis
nvs04120
Ubiquitin mediated proteolysis
nvs04218
Cellular senescence
nvs04310
Wnt signaling pathway
nvs04340
Hedgehog signaling pathway
nvs04390
Hippo signaling pathway
nvs04710
Circadian rhythm
nvs05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122901034 (BTRC)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
122901034 (BTRC)
04340 Hedgehog signaling pathway
122901034 (BTRC)
04390 Hippo signaling pathway
122901034 (BTRC)
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
122901034 (BTRC)
04218 Cellular senescence
122901034 (BTRC)
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
122901034 (BTRC)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
122901034 (BTRC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nvs04121
]
122901034 (BTRC)
03036 Chromosome and associated proteins [BR:
nvs03036
]
122901034 (BTRC)
Ubiquitin system [BR:
nvs04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
122901034 (BTRC)
Chromosome and associated proteins [BR:
nvs03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
122901034 (BTRC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_TEP1_C
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
EIF3I
WDR55
Beta-TrCP_D
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
F-box-like
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_IP5PC_F
Beta-prop_DCAF4
Beta-prop_DCAF12
F-box
Beta-prop_IFT140_1st
WD40_like
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_Nup120_160
Beta-prop_WDR19_1st
Beta-prop_WDR11_2nd
Beta-prop_VPS8
Beta-prop_WDR35_TULP_N
F-box_5
WD40_2
DUF4508
PAN_3
Motif
Other DBs
NCBI-GeneID:
122901034
NCBI-ProteinID:
XP_044096273
LinkDB
All DBs
Position
2:213226325..213409588
Genome browser
AA seq
605 aa
AA seq
DB search
MDPAEAVLQEKALKFMCSMPRSLWLGCSSLADSMPSLRCLYNPGTGALTAFQNSSEREDC
NNGEPPRKIIPEKNSLRQTYNSCARLCLNQETVCLASTAMKTENCVAKTKLANGTSSMIV
PKQRKLSASYEKEKELCVKYFEQWSESDQVEFVEHLISQMCHYQHGHINSYLKPMLQRDF
ITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIERMVRTDSLWR
GLAERRGWGQYLFKNKPPDGNAPPNSFYRALYPKIIQDIETIESNWRCGRHSLQRIHCRS
ETSKGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITGS
SDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRR
VLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVV
SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPR
APAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLNDPAAQAEPPRSPSRTY
TYISR
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggacccagccgaggcggtgctgcaggaaaaagcgctcaagtttatgtgctctatgccc
aggtctctgtggctgggctgctccagcctggcggacagcatgccttcgctgcgatgcctg
tataacccagggactggcgcactcacagctttccagaattcctcagagagagaagattgt
aataatggcgaaccccctaggaagataataccagagaagaattcacttagacagacctat
aacagctgtgccaggctctgcttaaaccaagaaacagtatgtctagcaagcactgctatg
aagactgaaaattgtgtggccaaaacaaaacttgccaatggcacttccagtatgattgtg
cccaagcaacgaaagctctcagcaagctatgagaaggaaaaagaactgtgtgtcaaatat
tttgagcagtggtcagagtccgatcaagtggaatttgtggaacatcttatatcccaaatg
tgtcattaccaacatgggcacataaactcgtatcttaaacctatgttgcagagggatttc
ataactgctctgccagctcggggtttggatcacattgctgagaacattctgtcatacctg
gatgccaaatcactatgtgctgctgagcttgtgtgtaaggaatggtaccgagtgacatct
gatggcatgttatggaagaagctcatcgagaggatggtcaggacagattctctgtggcga
ggcctggcagaacgaagagggtggggacagtatttattcaaaaacaaacctcctgatggg
aatgctccacccaactctttttacagagcactttatcctaaaattatacaagacattgag
acaatagaatctaattggagatgtggaagacatagtttacagagaatccactgccgaagt
gaaacaagcaaaggggtttactgtttacaatatgatgatcaaaagatagtcagcggcctt
cgagacaacacaatcaagatctgggataaaagcacgttggaatgcaagcgaattctcaca
ggccacacgggttctgtcctgtgtctccagtatgatgagagggtgatcataactggatca
tcggattccacagtcagggtatgggatgtaaatacaggtgaaatgctaaacacattgatt
caccattgtgaagcagtcctgcacttgcgtttcaataatggcatgatggtgacgtgctcc
aaagaccgttccattgctgtatgggatatggcctccccaactgacatcaccctccggagg
gtgctagtcggacaccgagctgctgtcaatgttgtagattttgatgacaagtacatcgtt
tctgcatctggagataggactataaaggtatggaacacaagtacttgtgaatttgtgagg
accttaaatggacacaaacgcggcattgcctgtttgcagtaccgagacagactggtcgtg
agtggctcatctgacaacactattagattatgggacatagaatgtggtgcatgtttacga
gtattagaaggccatgaggaactggtgcgctgtattcgattcgataacaagaggatagtc
agtggggcctatgatggaaaaattaaagtgtgggatcttgtagctgctctggacccccgt
gctcctgcagggacactctgtctacggacccttgtggagcattctggaagagttttccga
ctccagtttgatgaattccagattgtcagtagttcacatgatgacacaatcctcatctgg
gacttcctaaacgatccagctgcccaagctgaacccccccgctccccttctcgaacatac
acctatatctccagataa
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