Neogale vison (American mink): 122901036
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Entry
122901036 CDS
T08764
Symbol
POLL
Name
(RefSeq) DNA polymerase lambda isoform X1
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03410
Base excision repair
nvs03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122901036 (POLL)
03450 Non-homologous end-joining
122901036 (POLL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nvs03400
]
122901036 (POLL)
Enzymes [BR:
nvs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
122901036 (POLL)
DNA repair and recombination proteins [BR:
nvs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
122901036 (POLL)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
122901036 (POLL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
HHH_5
BRCT_2
NTP_transf_2
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
122901036
NCBI-ProteinID:
XP_044096279
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All DBs
Position
2:complement(213429534..213438002)
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AA seq
595 aa
AA seq
DB search
MTVALIKPKTIRLGSGHTSMDPGGILKAFPKRRKIHASPSSKALVKKPKQEGGEEAGEWL
SSLRAHVVPSGIGRARAELFEKQITQHGGQICAAQAPGVTHIVVDEGMDCERVLRLLRLP
QLPQGAQLVKSTWLSLCLQEKRLVDTAGFNICIPNSRYLDQPQLSKADQDSSVPPGAQEA
VLRTALSPPRPPTRPVSPPRRTEEAPSTQAQPGGDDETSDGEETQVSAADLEALISGHCS
PSLEGDGEPSPAPKGLDKWVCAQPSSQKAVNYNPHITEKLEVLAKAYSVQGDKWRALGYA
KAINALKSFHKPVTSYQEAFSIPGIGKRMAEKIVEILESGHLRKLDHISESVPVLELFSN
IWGAGTKTAQMWYQQGFRTLEDIRDQASLTSQQAIGLKHYEDFLERIPREEATEIEQTVR
EAAQAFSPGLLCVACGSYRRGKASCGDVDVLLTHPDGRSHQGIFNPLLDRLRRQGFLTDD
LVSQEENGQQQKYLGVCQLPGPGRRHRRLDIIIVPYSEFACALLYFTGSAHFNRSMRALA
KTKGMSLSEHALSTSVVRDTHGLKVGPGRVLPTPTEKDVFRLLGLPYREPAERDW
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgacagttgccctgatcaaacctaaaaccattaggctgggatctggccatacctcaatg
gaccctgggggcatcttgaaggcatttcccaagcggaggaaaattcatgccagtccatca
tcaaaagcacttgtaaagaaacccaagcaagaaggtggagaagaagcaggagagtggctg
agctccctgcgggcccatgttgtgcccagcggcattgggcgagcccgggcagaactcttt
gagaagcagattactcagcatggaggccagatatgcgctgcccaggccccaggggtcact
cacattgtggtggatgaaggcatggactgtgagcgagtcctccgtctccttcgactgccc
cagctaccccagggtgctcagctggtgaagtccacctggctgagcctgtgcctgcaggag
aaaaggctagtggacacggcaggatttaacatctgcatccctaacagcaggtacctggac
caaccacagctcagcaaggcagaccaagactcttctgtgcctcctggagcccaggaggct
gtgctcaggacagccctctctcctcctcgccctcccaccaggcctgtatctcctccccgg
aggacagaggaggcaccgagcacccaagcccagcctggcggtgatgatgaaaccagtgat
ggggaagagacacaggttagcgcagctgatctggaagcccttatcagtggccactgctcc
ccctccctcgagggagatggcgagcctagtccagcccctaagggcctggataaatgggtc
tgtgcacagccttcgagccagaaggcggtcaactacaacccccacatcacagagaagctg
gaagtgcttgccaaagcctacagtgttcaaggagacaagtggagggccctgggctatgcc
aaggccatcaatgccctcaagagcttccacaagcctgtcacctcctaccaggaggccttc
agtatccccgggattggaaagcggatggccgagaagatcgtagaaatcctggagagtggg
catctgcggaagctggaccatatcagtgagagcgtgcctgtcttggagctcttctccaac
atctggggagctggaaccaaaactgcacagatgtggtaccaacagggtttccggaccctc
gaagatatccgcgaccaggcctccctgactagccaacaggccattggcctgaagcattat
gaggacttcctggagcgcataccccgggaggaggctacagagattgagcagacagtccgg
gaagcggctcaggccttcagccccgggctgctgtgtgtggcgtgtggttcttaccgccgg
gggaaggcaagctgtggggacgtggatgtgctgctcacccacccggacggccggtctcac
cagggcatcttcaatcctctcctcgaccgccttcggcgccaagggttcctgacagacgac
ctggtgagccaggaggagaatggccagcagcagaagtacctgggggtgtgccagctcccc
gggccaggacggcggcaccgacggctggacatcatcatcgtgccctacagcgagttcgcc
tgtgccctgctctacttcactggctctgcccacttcaaccgctccatgcgggctctggcc
aagaccaagggcatgagcttgtcagagcacgccctcagcacctctgtggtccgggacacc
cacggcctcaaggtggggcctggccgagtgctgcccacccccacagagaaggatgtcttc
aggcttttaggcctaccctaccgagaaccagcagagcgtgactggtga
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