Neogale vison (American mink): 122901083 Help Entry 122901083         CDS       T08764                                  Symbol PDCD11 Name (RefSeq) protein RRP5 homolog isoform X1   KO K14792   rRNA biogenesis protein RRP5 Organism nvs  Neogale vison (American mink) Brite KEGG Orthology (KO) [BR:nvs00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03009 Ribosome biogenesis [BR:nvs03009]     122901083 (PDCD11) Ribosome biogenesis [BR:nvs03009]  Eukaryotic type   90S particles    Other 90S particles     122901083 (PDCD11) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  S1_RRP5 S1 HAT_Syf1_CNRKL1_N HAT_PRP39_N Spt6_S1 HAT_PRP39_C OB_RRP5 HAT_Syf1_CNRKL1_C Suf OB_RRP5_4th TPR_14 TPR_19 ARM_TT21 TPR_CcmH_CycH TPR_16 ARM_TT21_5th TPR_15 UTP6_C DUF2110 TPR_2 DUF7017 PPR ARM_TT21_C Motif Other DBs NCBI-GeneID:  122901083 NCBI-ProteinID:  XP_044096363 LinkDB All DBs Position 2:214963353..215006501 Genome browser AA seq 1870 aa AA seqDB search MEESFPRGGTRKTHKSEKALQKSVEQDNLFDISTEEESTKRKKSQKGPAKTKKLKTEKRE SSKSIREKFEILNIESLCEGMRILGCVKEVNELELVISLPNGLRGFVQVTEICDAYTKKL NEQVAQEEPVKDLVGLPELFSPGMLVRCVVSSVGITERGKKSVKLSLNPRNVNEVLSAEA LKLGMLLTGTVSSLEDHGYVVDIGVSGARAFLPLQKAQEYIRQKNKGAKLKVGQYLHCII EEVKGNGGVVGLSIGHSEVSAAIATEEQNWTLNNLLPGLVVKAQVQKVTPVGLTLNFLSF FTGLVDFMHLDPKKAGTYFSNQAVRACVLCVHPRTRAVRLSLRPIFLQPGRSLTRLSCQH LGAVLEDVPVQSFISKAGATFRLKDGALAYARLSHLSDSKNVFSADSFKPGNTHKCRIID YSQMDELALLSLRTSIIEAQYLRYHDIKPGALVEGTVLTIKPYGMLVKVGEQIRGLIPPM HLADILMKNPEKKYHIGDEVKCRVLLCDPEAKKLMMTLKKTLIESKLPAITSYADAKPGL QTHGFILRVKDYGCIVKFYNDVQGLVPKHELSAEYVPDPERVFYAGQVVKVVVLNCEPSK ERMLLSFKLLVDPKKEHLGHSQKKRRTVSLGQLVDVKVLEKTKDGLEVAVLPYNTPAFLP TPHLSDHVANGPLLYHWLQTGDTLHRVLCLSQSEGRVLLCRKPALVSTVEGGQDPKSFAE IHPGMLLIGFVKSIKDYGVFVQFPSGLSGLAPKAIMSDKFVTSTSDHFVEGQTVVAKVTN VDEEKQRMLLSLRLSDCGLGDLATTSLLLLSQCLEERQGVRSLMSNRDSVLIQTLAEMTP GMVLDLEVQEVLEDGSVVFSEGPVPGLVLRASRYHRAGQEVEPGQKKKVVILNVDMLKLE VHVSLCHDLVNRRAKKLKKGSEYQAVVQHLEESFAVASLVETGHLAAFSLTSHLNDTFRF DSEKLQVGQGVSLTLKTTEPGVTGFLLAVEGPAAKRTVRQTRKDSETVDEDEEADPALVV GTVKKHTLSIGDMVTGTVKSVKPTHVVVTLEDGIIGCIHASHILDDVPVGTSPTAKLKVG KTITARVIGGRDMKTFKFLPISHPRFIRTIPELSIRPSELEKDGCTALNTHSVSPLEKVQ QYQAGQTLICFLKKYNVVKKWLEVEIAPDIRGRIPLLLTSLSFKVLKHPDKKFRIGQALK ATVVGPDSSKAFLCLSLIGPHKLEKGEVAMGRVVKVTPKEGLTVSFPFGKIGRVSVFHLS DSYSETPLEDFVPQKVVRCYVLATTGHVLTLSLRSSRTNPKTKSKITDPEINSIQDIQEG QLLRGYVKSVQPHGVLFRLGPSVVGLARYPYVSQYSPSDKALYNKHLPEGKLLTAKVLSL NREKNLVELSFLPDDTGKPDVFSTSLGLPLLKQEEREREAAEKEHKGEEEKKKNQKRKRK RNQEGPEEAQLPGQEKSEAQKPQAEKRGRRRRRESASEQERVNKKQKKVAPSEEDDSGVE VYYREGEEEMEEMSVLPKEKPTRPAEAPRLQLSSGFVWDVGLDSLTPALPRRGDSSDSEE DDEPQQATQKKSKKERLLEKQKAEKELSRIEEALMDPGRQPESADDFDRLLLSSPNSSIL WLQYMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQESLTKVF ERAVQYNEPLKVFLHLADIYAKSEKFQEAGELYNRMLKRFRQEKAVWIKYGAFLLRRGQA GASHRVMQRALECLPIKEHVDVIAKFAQLEFQLGDAERAKAIFENTLSTYPKRTDVWSVY IDMTIKHGSQKEVRDIFERVIHLSLAPKRMKFFFKRYLDYEKQHGTEKDVQAVKAKALEY VEAKSSVLED NT seq 5613 nt NT seq  +upstreamnt  +downstreamnt atggaagaaagcttcccccgagggggtacaagaaagacccacaaatcagagaaagctttg cagaagtcagttgaacaagacaacttatttgatatttctactgaagaggaatccaccaaa aggaaaaagagccagaaagggccagcaaaaacaaaaaagttgaaaaccgaaaagagagaa agcagcaagtctataagagagaagtttgaaatccttaatattgagtccctgtgtgagggg atgcggattttgggttgcgtgaaggaagtaaatgaactggaactggtgattagtctcccc aatggacttcggggctttgtgcaagtcactgaaatctgtgatgcctacaccaaaaagttg aatgagcaggtggctcaagaagaacctgtgaaggacctggtcggcttgcctgaactcttc tcacctggcatgctggtgaggtgtgtggtgagcagtgtgggcattacagagaggggcaaa aagagtgtcaagttatctctgaaccccagaaatgtcaacgaagtgctaagtgctgaggcc ctgaagcttggcatgctgctcacaggcactgtgtccagcctggaagaccatggctacgtg gtggacattggtgttagtggggccagagcctttttgccactacagaaagcccaggagtat atccgacagaagaacaaaggtgctaaactgaaggtggggcagtacctgcactgcatcatt gaggaggtcaaaggcaatggaggagtggttggtctgtctattggtcattctgaagtttct gctgccattgctactgaggagcaaaactggacccttaataacttgctaccaggactggtg gtcaaagcccaggtacagaaggtgactccagttggccttacactaaactttctttcattc ttcactggcctggtcgactttatgcacctggatcccaagaaagctggaacatatttctca aatcaagcagtaagggcctgtgttctctgtgtccatcctcggaccagggctgtgcggctg agcctgcgtcccatcttcctgcagccggggcgctccctcacccggctctcttgccagcat ctgggagccgtgctggaggacgttcctgtccagagctttatcagcaaggccggcgccacc ttcaggctgaaggatggggcactggcctatgcccggctcagccatctctccgactcgaaa aacgtcttcagtgctgactcctttaagccagggaacactcacaagtgtagaatcatcgat tacagccaaatggatgagctggccttgctctctctgaggacgtccattattgaagctcag taccttagatatcatgacatcaaacctggggcactggtagagggcacagtgctgaccata aagccctatgggatgctggtgaaggtgggcgagcaaatccggggcctgataccacccatg cacctggccgacatcctgatgaagaatccggaaaagaagtaccacatcggggatgaggtc aagtgccgggttttgctctgtgatcctgaagccaagaagctgatgatgacgctgaagaaa accctaattgagtccaagctgcctgccattacctcctacgctgatgccaagcctggtctg cagacccatggcttcatcctcagggtcaaggactatggctgcattgtgaagttctacaac gatgtgcagggactggtgcccaagcatgagctcagtgccgagtatgtccctgacccagag agggtcttttacgctggccaggtggtgaaggttgtggtgctgaactgtgagccatccaaa gagaggatgcttttgtccttcaagctgttggttgatccaaagaaggagcatctgggacac agtcagaagaaaagaagaactgttagccttggacagctggtggatgtgaaggttttagag aagaccaaagacgggctggaggtggctgtcctgccctacaacacccccgctttcctcccc acgcctcatctgtcggaccacgtcgccaatggccctctgctgtatcactggctgcagacc ggtgacacccttcacagagtactctgtctcagccagagcgaggggcgtgttctcctttgt aggaagccagctttggtctccactgtggagggtggccaggatcctaaaagctttgcagaa atccatcctgggatgctgctcatcggttttgtgaagagcatcaaggactatggtgtgttc gtccagttcccgtcaggtcttagtggactggcccccaaagctatcatgagtgacaagttt gtgacttctacaagtgaccacttcgtcgaggggcagacagtggttgcgaaggtgaccaac gtggatgaggagaagcaacgcatgctgctgtcactgcggctgtcggactgtggtctgggc gacctggccaccaccagtctcctcctcctgagccagtgcctggaagagcggcagggtgtg cgcagcctcatgagcaaccgagactctgtgttgatccagacgttggctgagatgacaccc gggatggtccttgacctagaggtgcaggaggtgttggaggacggctctgtagtgttcagt gagggccccgtgcctggcctggttctgagggccagcagataccatcgggcagggcaggag gtggaacctgggcagaagaagaaggttgtcatcttaaatgttgatatgttgaaattggag gtacatgtttccctttgccacgatttggtgaacagaagagctaaaaagctgaagaaaggc agcgagtaccaggcagtcgtgcagcacttggaggagtcctttgctgtcgcctccttggtt gagactggccacctggcagctttctccttgacctctcacctcaatgacaccttccgcttt gactcagagaagttgcaggtgggacagggtgtctccctaaccctcaagaccacagaacca ggagtgaccggttttcttttggctgttgaggggccagctgctaagaggactgtgagacag acccggaaggactctgagaccgtcgatgaggatgaggaagcagatccagctctggttgtg gggactgtaaagaagcacaccctgtccatcggggacatggtcacaggcactgtcaagtct gttaagcccacccatgtggttgtgacactggaagacggcatcattggttgcattcacgcc tcccacattctagatgatgttccagtgggcacatctcctactgccaaactgaaagttggg aagacaatcactgcccgagtgattggtgggcgagacatgaagacgttcaagtttctccca ataagtcatcccagatttattcgaaccattccagagctgagtatccggccaagtgagctg gagaaggacggctgcactgctctcaacactcactctgttagccccttggagaaggttcaa cagtaccaggctgggcagacgttgatttgttttttgaagaagtacaacgtggttaagaaa tggctcgaggtggagattgctccagacatccggggcaggattcccttgttgctcacctct ctcagcttcaaggttctaaaacatccagataagaagttccggattggccaggccctgaag gctactgtggttggcccagattcttccaaggctttcttgtgtctctcacttataggtcct cacaagcttgagaagggggaagtggccatgggccgagtggtgaaggtgactcccaaggag gggctgactgtctcctttccctttgggaagatcggaagggtcagtgtatttcacttgagt gactcctattcagagacgcccctggaagacttcgtcccccagaaggttgtcaggtgttac gtcctggctactacaggccatgtattgactctgtcgctgcgatcatccaggacaaacccg aagacgaagagcaaaataactgatcctgagatcaactccatccaggacattcaggaaggg cagctcctgaggggctacgtgaagtctgtccagccgcatggcgtgctcttccgccttggc ccctctgttgtgggtttggcccgatatccgtatgtctcccagtacagtccatctgacaaa gccctttacaacaaacacctcccggaagggaagctgctcacagccaaggtcctgagccta aaccgtgagaagaacctggtagagctgtcgttcctccctgatgacactgggaagccggac gtgttttctacctccctaggactgccacttctaaaacaagaggagagggaaagggaggca gcagagaaagagcacaaaggagaagaagagaagaagaagaatcagaaaaggaaaaggaag aggaaccaggaggggccagaggaggcacaactgcccggccaggagaagagtgaggcccag aaaccgcaggcagagaagcggggcaggcggcggcgccgggagtctgcaagcgagcaggaa agagtgaacaagaagcagaagaaagttgctccgtcagaggaggatgacagcggtgttgaa gtgtactatcgggagggagaagaggagatggaggagatgagtgtgctgcccaaggagaag ccgaccaggccagcagaagcgccccggctccagctgtcctctggtttcgtttgggacgtg ggactagactctctgaccccggcattaccacgtcgaggagacagctcagacagcgaggag gacgacgagccgcagcaggccacgcagaagaagagcaagaaggaaaggctgctggagaag cagaaggcagagaaagagctgtcccgcatcgaggaggctctcatggatcctgggcgacag ccagagtcagcagatgattttgaccgcctcctgctgagctcccccaacagctccatcctg tggctacagtacatggccttccacctgcaggccacggaaatcgagaaggcccgggccgtg gccgagagggctctcaagaccatttccttcagagaggagcaggagaagctgaacgtgtgg gtggcgttgctgaatctagaaaacatgtatggctctcaggagtcactgaccaaggtcttc gagcgggccgtgcagtacaacgagcctctcaaggtctttctccatctggctgacatctac gccaagtcggagaaattccaggaagctggtgaactctacaaccggatgctgaagcggttc aggcaggagaaagctgtctggatcaaatatggcgcctttcttctgaggaggggccaggct ggggccagtcaccgtgtgatgcagcgagctctcgagtgtctgcccattaaagagcatgtg gatgtgattgccaagtttgcccagctggagttccagctgggggatgcggaacgggccaaa gccatttttgagaacacactgagcacctacccgaagcgcactgacgtctggtcggtttac atcgacatgaccattaagcatggcagccagaaggaagtccgggacatctttgaacgggtc attcatctcagcctggcccccaagcgaatgaaattcttcttcaagcgctacctggactat gagaaacaacatggcactgagaaggacgtgcaggcagtaaaggcgaaggccctggaatat gtggaagctaagagctccgtgttggaggactag

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